Ralstonia solanacearum PSI07: RPSI07_2017
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Entry
RPSI07_2017 CDS
T01273
Name
(GenBank) Putative type III effector protein, SspH1 family
Organism
rsl
Ralstonia solanacearum PSI07
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Gene cluster
GFIT
Motif
Pfam:
NEL
DUF1877
Motif
Other DBs
NCBI-ProteinID:
CBJ51381
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All DBs
Position
complement(2106733..2108796)
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AA seq
687 aa
AA seq
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MPPRVPSSTLGRSLHVTGEASTSTSATATVTRPASSTAPAAGRSRHGLLAELPPRRPDNT
PSVSAARVRVDGGAWDVRSAIGAMAALSSERETRLFKKSASKQYLYAKGLTAERRGQLEL
ALEGQFRNSAASAEARDSALTMWLSVQQARLRTHTAGHRDYHNGEQFETAVWSVPIPLMA
LAYRTQRRRYYSSPLRPEYRTAFNNFMRVIGDRSLGQEVRQTVAQRLEYHWHSEETIARH
EREQLQQHGVMGLAEQRYRVSADFEHARLNAMERQYVIRREGRGVPSALHVQALQTELPR
AEQGSPRHQWLTRQLREADGGVRQGGAAAASAGPSSSAQTLLNAYLEAANSAAAAARLRA
GTAEDVGRQRQPLGAELKGWLKLAGAKSLPDAKAFDNEAYADAFARLLHRRRPWSLLPFV
ARWDPVVVDGAKVIHAIAKDADLRKDVFAAADTALGSCSDNVAEGFSNIVTMVDSHQLVE
KVHSGEMDQPKLESWIRQRYRLDSLVTEVNRLVESSRNREGRDATMTDLQLAREPVETLL
HAKVALKKELDLPKNIPSHMQYRRVSALKKGDLRALAETVRAKEANPVDLARYLLSNDAW
RTAMQALHSAAFTELQSRFAPEKNALAKEVPPQPTDAEELEFLEERIAYAERTQAFTKKV
RAAEDTLLLSLAGRNALVPAVVGVGPS
NT seq
2064 nt
NT seq
+upstream
nt +downstream
nt
atgccgccccgtgttccatcctccacgcttggccgatcccttcacgtgacgggagaggcc
tcgacgtccacttccgccaccgccaccgtcacccggccggcatcttccacggcgccagct
gccggtcgttcgcggcatggcctgttggcggagctgccaccccggcgtccggacaacacg
ccatccgtcagcgctgcccgcgtgcgcgtagacgggggggcgtgggatgtgcggagcgcc
atcggcgcgatggccgcgctttcgtcggaacgggagacgcgcctgttcaagaagtccgcc
tcgaagcagtacctgtacgccaagggcttgactgcagagcggcgcgggcagctggaactg
gcgctggaggggcagttccgcaattcggcggcttccgccgaagcccgggattcggcgctg
acgatgtggctttccgttcagcaggcgcggctgcgcacgcatactgccggccaccgggat
taccacaacggcgagcagttcgaaacggcggtctggagcgtcccgatcccgctcatggca
ttggcctatcgcacgcagcggcggcgctactattcctctccgctgcggccggaatatcga
acggcattcaacaacttcatgcgcgtcatcggtgatcgctcgctgggccaggaggttcgc
cagacggtcgcgcagcggctcgagtaccactggcacagtgaagaaaccatcgcccggcac
gaaagagagcagctccagcaacacggcgtgatggggctcgccgaacaacggtatcgggtc
agcgcggacttcgagcacgccaggctgaacgctatggagcggcagtatgtgatccggcgg
gaaggacgtggcgttccatcggcgctgcatgtccaagccttgcagacggagctgccgcgc
gctgagcagggctcgccgcggcaccagtggctgacccgccagttgcgcgaagcggacggg
ggcgtgaggcaaggcggggctgccgccgcttccgctggtccgtcttcttcggcgcaaacg
ctgctgaacgcgtatctcgaggctgcgaactccgctgccgccgcggcccgcctgcgcgcg
ggcactgccgaagacgtcgggcggcaacggcagccgcttggggcagagctcaaggggtgg
ctcaagcttgccggggccaagtctttgccggacgccaaggccttcgataacgaagcgtat
gccgacgcgttcgcccgtctgctgcatcgccgccggccgtggagcttgctccccttcgtt
gcccgctgggatccggttgtcgtcgacggggcgaaggtcatccatgccattgcgaaagac
gctgacctgcgcaaggacgtgttcgccgcggcggacaccgcattgggaagctgcagcgac
aatgtggccgaagggttttccaacatcgtgacgatggtcgattcgcatcagctcgtggag
aaggtgcacagcggcgagatggatcagccgaaactggaatcctggatacgccagcggtac
cgtctggacagcctggtcacggaagtcaatcgattggtggagagcagccgaaaccgggag
gggcgggacgccaccatgaccgatttgcagttggcgagggaaccggtggaaacgctgctt
catgcgaaagtcgcgttgaagaaggaactcgacctgcccaagaatatcccgtcccacatg
cagtatcggcgcgtaagcgcgctcaaaaagggcgatctcagggcgctggccgaaaccgtg
cgggcgaaggaagccaatcctgtcgacttggccaggtacctgctcagcaacgacgcgtgg
cgcaccgccatgcaggcgttgcactccgctgcgttcaccgagcttcagagccgttttgcc
ccggaaaagaacgccctcgcaaaggaagtgcctccccagcccaccgatgccgaggagctg
gagttcctggaagagcggatcgcttacgcagaacggacgcaggcgtttacgaaaaaggtc
cgggccgccgaggacacgctcctgctgtcgcttgccggacgcaacgcgctcgtgcccgca
gtggtgggcgtcgggccttcgtaa
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