Ralstonia solanacearum CMR15: CMR15_mp10270
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Entry
CMR15_mp10270 CDS
T02725
Name
(GenBank) Type III effector protein (Skwp5)
Organism
rsm
Ralstonia solanacearum CMR15
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Utp13
Motif
Other DBs
NCBI-ProteinID:
CBJ39924
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All DBs
Position
CMR15_mp:complement(322688..329722)
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AA seq
2344 aa
AA seq
DB search
MKSNRTHRNLPPAHVGHTARGHAPATAGSQAARAPRARPQDLPHRASASRGAEQTARIAA
PAPGEALSKALNYRGDNLAGERRTRLEEERRQQQHELCRESSNGFPARCIEMARDNILAE
RNGHGWALAFLHPGGDSDANLSLLGYYLSKLGDGGHGRGDPGLSDKIRACAELSAQYLLH
TSWFEGLPPASYSHLANKFSKFPDSAPCMDALHWIAEQAVQARTLRPMGDRDGSRLVGGF
AKNTRSDACRNAVLRIVHWLLGSSTVRARMDGIRVSMLLNALSKWPTDDDAKALALQLAE
LLDAKPQLRAALDSQGIGNCLNALSKWSTEPWAETVVMQLAGRLTAEPDLRRSLRGQELV
NSLNALSKWTHRDTAKQATLHLADRLATEPQLRRQLNAPLLSSGLNALSKLSGERQAKEA
ALQLARSIAAEPGVLKKIDAQGVANALNALSKWATDERAIRAARLLADCLVSNQRLPRAL
KTEELASTLNALSKWLNDDTIEQAALLLAERITTDPELRAAMVAREIANAMNALCKWPSA
EASKQAVLLLAKRLEEEPQLRSAMNDQHVSNILSALSKWHEEEQASRTALLLAKRLVDEP
DLLQALEAQGVATVLNALSKWPQLDLAKQVALPLADRVATEPKLRKAMDTQEAINTLSAL
SKWPGEPRATLAAQRLIEQLTSESAGQWATLEPRGLSNALIALSKWPDESWAKQTAMSLA
ERIATEAQAWDDVDPQSVSNALSALSKWPEENQARLATRELAGRILADEKLRASFDAQAL
ANSLGALAKWPNEPEAMRAFWQLSTLPGRAGHPWRTFNLVDMAQISNAFARLLQNDEGAD
LERARGILQHLAVHLELHPEGFERSSVGHIGVLFKSFANLRILPSLRPLCRPVLNRVTTL
CRETQLRDEPLETIGNLCLGLLPLARSPELIRHRVSALWAFDTLQPIVARKIDSYLRQGE
RATTGAALRVTDGQEACGTRGPALTFYQILKAYALVARQWKRRYIQDARQAVHDRQAALR
QWVDDTLERTRSVIEADLQEMSWNLIAQIEAGDDVLNALDLRIGKDLEHITQRHPPTRFD
LAGTRARMTTAPGRVRPVKAGVGDTRHVTVDLQGRELKVDDETHPPYSLYARLTGQPLVE
VRLPGKLSAFMLARTFQYQGEPWRFDLFGGSRIKRGRSNQVVSILAGDQPLPSMLPAMRY
ADSAPGSAFMALTHKLAPQREDWSRMQRALLEMVPHDHVVEGTMRIGWFKDVSGPRHPFK
LTAPRGQRIAVCPNDGCGFLRWEVAMRIPAVREQIEAWQAVRNGNATDAEQQRIADQALG
SNTMPPQALMHFPRDEAVLAEAHEAMQRKLNKLRTEVQGRAAASKTEASALSPDAVNLLT
LYQLTTSGGYEGRRIRAVPSADDKLYLPTIPMDGFAHPAGDLLVGKPPYDKENLLPIGPE
RVGTALQGDATGRFLDQCFAIQYSYTGFDDGSGRAADMLHSKGMLIIPPQGYWPAAHGHL
DLACSTEDLKVLSRWKQGRDRDSVPATMLSTGSLRVKDILLPGRLGALPIPELRKRNMDT
DGDDAFVYAGYPKLAAHIRRVMDERSDRRGTEHSFKPPKTASPAFDAQGRYQAGRAREIL
AEQRGGQLVGVSSNAATRFLSQPDELREAMATSMMFGTYDGIERRLRNGLRALLEGREPA
PALEELQALAHQAIARAHLPEAHDVAVLLHTLTTQLGAAEAQPVPRLAADVAQRFGPLAE
AWAAATDTPARIHAILDHYPACGLPHEQFPKGQPGYVEGQPELTMRNLFTLAAKVGTDAL
KADTGTELFTKLTEKCETAERSFPDRVRYVPHSKQTAREFREERFDPERAVATLERIPTL
AAGVMQDAVGALQQVGLLVARPAPAERLRTVSPAAMERAATVLSERAHTASAQITPLLRT
NLRAWIGADLGADAARLAGLEHAVKSANSLKSKLGYMIASKPSPDLQDAVSRVNDALRYS
IVLPSDTFVAASRRILAGLEKQGHAMTARTNHFNRSGTPFGALSVTLQAPGGDILWEIQF
HTEPTFALKARHHNLYKQAQEERHRGASSDAIRALLRPAWQDFRAVPLPAGCEEIEDWQQ
EPIHTATSTQPLRAGQSTAQRIAPYLQPLVRLLSTQAHRIEAQVSSKLQQLLQKHDGQLR
EDKPGNWRNFLFKKERSIARKIALRQRTNAHLTPENAAARVRDTLRYEVILPVEGFGKAV
DTILKALGRHGLKAMRLKNAFMQPDTTYAGLNVNLRFADARIPGDFEIQFHTAHSLSTKL
KMHRDYEKVRELPPANARADGDEASLEFNAERERRLQKMRDAAALVKRPQGIETVIPFDH
YQDA
NT seq
7035 nt
NT seq
+upstream
nt +downstream
nt
atgaagtccaatcgcacccaccgcaacctccctcccgctcatgtgggtcacacggcaagg
ggccatgccccggctacggccggatcgcaagccgcgcgcgcgccgcgcgccagaccgcag
gacctgcctcaccgcgcgagtgcgtcgaggggcgccgagcagacggctcggatagcggct
ccggcgcccggcgaagcgctgtcgaaagcgctgaactatcgcggagacaaccttgccggc
gaacgacgcacgagactcgaagaggagcgcaggcagcagcagcacgagctctgtcgcgag
agcagcaacggctttccggcgcgatgcatcgaaatggcccgcgacaatatcctggccgaa
cgcaacggccatggatgggcactggccttcctgcatccgggaggcgacagcgacgcgaac
ctctccctgctgggctactacctctcgaaactgggcgacggcggacatggccggggcgac
ccgggcctgagcgacaagattcgtgcatgcgccgagctgagcgcacagtacctgctgcac
acctcctggttcgaaggtttgcctcccgcctcgtactcgcatctggcgaacaagttcagc
aagttcccggacagcgcgccctgcatggacgcgctgcactggatcgccgagcaggccgtg
caggcgcggaccctgcgcccgatgggcgaccgagatggttcgaggctggtgggcggcttc
gcgaaaaacacgcgcagcgacgcctgcagaaacgccgtgctgcgcatcgtccattggctg
ctcggaagcagcacggtgcgtgcccggatggatggcattcgggtctccatgctgctgaac
gccctgagcaaatggccgaccgatgacgacgcgaaggccctcgcattgcaactggccgag
ctgctggacgcgaaacctcagctgcgcgcggcgctggacagccaaggcatcggcaattgc
ctcaacgcgctgagcaagtggtcgaccgaaccgtgggcggagaccgtggtcatgcagctg
gccggccgcttgacggcggagcccgacttgcggcgttcgctgcgcgggcaggagctggtc
aattcgctgaatgcattgagcaaatggacgcaccgcgacacggcaaagcaggcgaccctg
cacctggccgaccgcctggcgaccgagccgcaactgcgccgccagctcaacgcaccgctg
ctgtccagcgggctgaacgcgctgagcaagctatccggcgagcgccaagcgaaggaagcc
gccctgcagctggcgcgcagcatcgcagccgaacccggcgtgctgaaaaagatcgacgcg
cagggcgtcgccaacgcgctcaatgcgctgagcaagtgggccacggacgagcgggcgatc
cgggcggcacgcctgctggcggactgcctggtctcaaaccagcggctgccgcgcgcactg
aagacggaggagctcgccagtacgctgaatgcgctgagcaaatggctgaacgatgacacg
atcgagcaggcggccctgctgctcgccgagcgcatcacgaccgaccccgagctgcgcgcg
gcgatggtggcgcgggaaatcgccaacgcgatgaacgcgctctgcaaatggccgagcgcc
gaagcgtcgaaacaggcggtgctgctgctggccaagcggctagaagaggaaccgcagctg
cgcagcgcgatgaatgaccagcacgtttccaacatcctgagcgcactgagcaagtggcac
gaggaagaacaggcgagccggaccgcgctgctgctggccaaacgcctcgtagacgagccc
gacctgctgcaggcactggaggcgcagggcgtcgccactgtcctgaacgcactgagcaag
tggccgcagctggacctggcaaagcaagtcgccctgccgctggccgatcgcgtcgcgacc
gagccgaaactgcgcaaggccatggatacacaggaggcgatcaatacgctgagcgcgctg
agcaaatggcccggcgagccgcgggccacgctcgccgcgcagcggctgatcgagcaactg
acgtcggagtccgccgggcaatgggccacgctggagccacgcggcctctccaatgcgctg
atcgcactgagcaagtggcccgatgaaagctgggccaagcagaccgccatgtcgctggcc
gaacgcatcgccacggaagcgcaagcgtgggacgacgtggatccgcaaagcgtgagcaac
gccctgagcgcgctctcgaagtggcccgaggaaaaccaggcgcggctggcgacccgcgaa
ctcgccggccggatcctcgcggacgagaagctgcgggcctcgttcgatgcgcaagcgctg
gcgaacagcctgggcgcgctggcgaaatggccgaacgagccggaagccatgcgggcattc
tggcaactgtccaccctgccggggcgggccggccacccgtggcgcaccttcaacctcgtg
gatatggcgcagatcagcaacgcgttcgcgcgcctgcttcagaacgacgaaggggcggat
ctcgagcgggcccggggcatcctccagcacctcgccgtccatctcgaactgcaccccgaa
ggcttcgagcgctcgagcgtcggccatatcggcgtactgttcaagtcgttcgccaacctg
aggatcttgccgtcgctgcgtccgctgtgcaggccggtgctgaaccgggtgacgacgctg
tgccgcgagacgcagctgcgcgacgaaccgctcgagacgatcggcaatctgtgcctcgga
ctgctaccgctggcccgcagccccgagctcatccggcatcgcgtctcggcgttgtgggcc
ttcgataccctgcagcccatcgtggcgcgcaagatcgacagctatctgcggcaaggcgag
cgggcgaccaccggggcggccctgcgcgtgacggatgggcaggaagcctgcggcacgcgc
ggcccggccctgaccttctatcagatcctcaaggcctacgcgctcgtcgcccgccaatgg
aagcggcgctatatccaggatgcgcgccaggcggtccacgaccggcaagccgccctccgg
caatgggtcgacgacacgctggagcgcacgcggagcgtgatcgaagcggatctgcaggaa
atgagctggaacctcatcgcccagatcgaggcgggcgacgacgtgctgaacgcattggac
ctgcgcatcggcaaggacctggagcacatcacgcagcgccatccgccgacccgcttcgac
ctggccggcacgcgcgcgcgcatgaccaccgcgccggggagggtcaggcccgtcaaggca
ggcgtgggcgatacccgccatgtcacggtcgacctgcaggggcgcgagctcaaggtggac
gacgaaacccatccgccctattcgctctatgcccgcctgaccgggcagccgctggtcgaa
gtccggctgccgggcaagctgagcgccttcatgctggcacgcaccttccagtaccagggc
gagccctggcgcttcgacctgttcggcggcagccggatcaagcgcggtcgcagcaaccag
gtggtctccatcctggcgggcgatcagccgctgccctccatgctgccggccatgcggtat
gccgacagcgcgccgggcagcgcattcatggccttgacgcacaagctggccccgcagcgc
gaagactggtcgcgcatgcagcgggcgctgctggaaatggtgccccacgatcatgtcgtg
gaaggcacgatgcgaatcggctggttcaaggacgtctccggcccgcggcatccgttcaag
ctcacggcgccccgcggccagcgcatcgcggtgtgccccaacgacggctgcggcttcctg
agatgggaggtggccatgcgaattcccgccgtgcgcgagcagatcgaggcctggcaagcg
gtgcggaacggaaacgccacggacgccgagcagcagcgcattgccgatcaggcgctgggt
tccaatacgatgccgccgcaagcgctgatgcatttcccgcgtgacgaggcggtcctggcg
gaggcccacgaggcgatgcagcgcaagctgaacaagctgcgcaccgaggtccagggccgt
gccgccgcctcgaagacggaggcgtccgcgctttcgccggacgcggtgaaccttctgacg
ctgtaccagctgaccaccagcggcggttacgagggacggcgcatccgcgcggtgccgtcg
gccgacgacaagctgtatctgccgaccattccgatggacggcttcgcgcacccggcgggc
gacctgctggtcggcaagcccccctacgacaaggagaacctgctgccgatcggtcccgaa
cgggtgggcacggccttgcaaggcgacgccaccggccgcttcctcgatcagtgtttcgcc
atccagtacagctacaccggctttgacgacggttccggccgggccgccgacatgctgcac
agcaagggcatgctgatcatcccgccgcaggggtactggccggccgcgcacgggcacctg
gacctcgcctgctccacggaggacctcaaggtgctgtcgcgctggaagcaggggcgcgac
cgcgacagcgtgccggcgacgatgctcagcaccggcagcctgcgcgtcaaggacatcctg
ctgccgggacgcctcggcgcgctgccgattccggaactgcgcaagcgcaacatggatacg
gacggcgacgatgcgttcgtctatgccggctatcccaagctggcggcgcacatccggcgg
gtcatggacgagcgcagcgaccggcgcggcaccgagcactccttcaagccgccgaaaacc
gcgagcccggcgttcgacgcgcagggccgataccaggccgggcgcgcccgcgagatcctc
gcggagcagcggggcggccagttggtcggcgtgtccagcaatgccgccacacgcttcctg
tcgcagccggacgaactgcgcgaggcgatggcgacgagcatgatgttcggcacctacgac
ggcatcgagcggcgccttcgcaacggtctgcgtgcgctgctcgagggccgcgagccggcc
ccggcgctggaggaactgcaggcgctcgcacaccaggccatcgcccgtgcgcatctgccc
gaagcccacgatgttgcggtgctgctgcacacgctgacgacccagcttggggcggccgaa
gcccaaccggtgccccggctcgccgcggatgtggcgcagcgattcggcccgctcgccgag
gcctgggcggcggcgacagacacccccgcgcgcatccatgcgatcctggatcattacccg
gcgtgcggcctgccgcacgagcagtttcccaagggacagccgggatacgtggagggccaa
ccggaactgacgatgcgcaacctcttcaccctggcggcgaaggtcggcaccgatgcgctg
aaagcggataccggcacggaactgttcacgaaactcaccgagaagtgcgagactgccgaa
cggtcgtttcccgaccgggtgcgatacgtgccacattccaagcagactgcgcgcgagttt
cgcgaagagcgcttcgatcccgaacgggccgtggcgacgctggagcgcattcccaccctc
gcggcaggggtcatgcaggatgccgtcggcgcgcttcagcaggtgggcctgctggttgcg
cggcccgcgccggcggagcggctgcgcacggtatcgcccgcggcgatggagcgtgccgcc
acggtgctcagcgagcgggcgcacacggcctcggcgcagatcacgccactgctgcggacg
aacctgcgtgcgtggatcggggccgacctcggcgccgacgccgcgcgccttgccggactc
gagcacgccgtcaaatcggcgaactcgttgaagagcaagctgggctacatgatcgcctcg
aagccgtcgccggatctgcaggacgccgtctcgcgggtcaacgatgcgctgcgctacagc
atcgtgctgccgtcggacacgttcgtggcggcgtctcgccgcatcctcgcgggcctcgaa
aagcaggggcatgcgatgaccgcgcgaaccaaccacttcaaccgatcgggcaccccgttc
ggggcgctgagcgtgaccctgcaggccccgggcggcgacatcctgtgggaaatccagttc
cacacggagccgaccttcgcgctgaaggcgcgccaccacaacctgtacaagcaggcgcag
gaagagcggcatcggggcgcatcgtccgacgccatccgcgcgctgcttcggccggcgtgg
caagacttccgggcagtgccgttgccggccggatgcgaggagatcgaagactggcagcag
gagccgatccataccgcgacgtcgacccagccgctgcgcgcagggcagagtactgcgcag
cggatcgcgccctatctgcagccgctggtgcgcctgctcagcacgcaggcccatcgcatc
gaagcgcaggtctcgtcgaagctgcagcaactgctgcaaaagcatgacgggcagctgcgc
gaagacaagccgggcaactggcgcaatttcctcttcaagaaagagcgctccatcgcgcgc
aagatcgcgttgcgccaacgtaccaacgcacacctgacgccggaaaacgccgccgcgcgg
gtccgggataccctgcgctacgaagtcatcctgcccgtcgaaggattcggcaaggccgtc
gacacaatcctcaaagcgctcggcaggcacggtctgaaagcgatgcgcctgaaaaacgca
ttcatgcagcccgacacgacctacgccggcctcaatgtcaacttgcgttttgccgacgcc
cgcatccccggagacttcgagatccagttccatacggcccacagcctgagcaccaagctc
aaaatgcacagggattacgagaaagtccgggaattgccgcccgccaacgcgcgcgccgac
ggcgatgaagccagcctcgaattcaacgcggaacgcgagcgacgcctgcagaaaatgcgt
gacgcggcagccctggtgaagcgcccgcaaggtatcgaaaccgtgatcccgttcgaccac
taccaggatgcgtag
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