Ralstonia solanacearum Po82: RSPO_c01227
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Entry
RSPO_c01227 CDS
T02005
Symbol
dnaE1
Name
(GenBank) dna polymerase III (alpha chain) protein
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
rsn
Ralstonia solanacearum Po82
Pathway
rsn03030
DNA replication
rsn03430
Mismatch repair
rsn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rsn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
RSPO_c01227 (dnaE1)
03430 Mismatch repair
RSPO_c01227 (dnaE1)
03440 Homologous recombination
RSPO_c01227 (dnaE1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rsn03032
]
RSPO_c01227 (dnaE1)
03400 DNA repair and recombination proteins [BR:
rsn03400
]
RSPO_c01227 (dnaE1)
Enzymes [BR:
rsn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
RSPO_c01227 (dnaE1)
DNA replication proteins [BR:
rsn03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
RSPO_c01227 (dnaE1)
DNA repair and recombination proteins [BR:
rsn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
RSPO_c01227 (dnaE1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
DNA_pol_IIIA_C
tRNA_anti-codon
Ski2_N
Motif
Other DBs
NCBI-ProteinID:
AEG68528
UniProt:
F6FZG0
LinkDB
All DBs
Position
1297115..1300639
Genome browser
AA seq
1174 aa
AA seq
DB search
MNSPRFVHLRLHSEYSIVDGNVRLDEAVKAAAADGMGALALTDLANAFGLVRFYKEARGK
GVKPVVGADVWITNHDERDKPGRLLLLVRNKQGYLNLCTLLARAWLSNQHRGRAEIAPEW
FDEPGVEDAPLSTGLLALSGAMGGDVGMALANGNEALARKLATHWSRVFPQAFYIELQRA
GQAGTEAYIQQAVKLAASMQLPVVATHPVQFMTQDDFTAHEARVCIAEGDLLANPRRTRR
FSTEQYFKKQDEMCALFADIPSALANTVQIAQRCNLTLELGKPKLPLFPTPDGMSLDDYL
VHLAKDGLEKRMEVLFPDAAVREAKRPEYYARLEFETGTIIKMGFPGYFLIVADFINWAK
NNGVPVGPGRGSGAGSLVAYALGITDLDPLKYNLLFERFLNPERVSMPDFDIDFCQHGRD
RVIHYVKEKYGKDAVSQIATFGTMAAKAAVRDVGRVLDLGYNFVDGVAKLIPFKPGKLVT
LEEAKKEEPLLAEREANEEEVKQLLELAQRVEGMTRNVGMHAGGVLIAPGKLTDFCPLYT
QGGEDAGVVSQYDKDDVEAVGLVKFDFLGLTTLTILDWAERYIRMLDPSRADWNCSHIPL
NDKPAFDILKAANTVAVFQLESRGMQGMLKDAKPDRFEDIIALVALYRPGPMDLIPSFCA
RKHGREKVEYPDPRVEPVLKETYGIMVYQEQVMQMAQIVGGYSLGGADLLRRAMGKKKAE
EMAEHRELFRGGAAKDGLSTEKADEIFDLMEKFAGYGFNKSHAAAYALLAYYTAWLKAHH
PAEFMAANMSLAMDDTDKVKILYDDAAGKNGLKVLPPDINASLYRFTPTDAKTIRYGLGG
VKGSGQGAIEDILRAREDGPFKDLFDFCERVDRRQVNRRTIEALVRAGAFDSLNDNRAQL
LVSIGLAMEAAEQKAAAANQVSLFDLMSGEDAEEHRPELLDEAPWSTKRKLQEEKQALGF
YLSGHLFDECRDEVRRFARTTLADLAREVNGNGNGNGGGYGSRDARNKTVSGVIVGLRTQ
MTQRGKMIVVMLDDGSQSEATEVTVFNELFDANRGLFKEDEVLIVQGNARHDTFTGGVRM
TAEAVMDLTQARSRYAEALGLVLRDDASAARLRELLTPYLATQASGVRVHISYAANGACC
KAVLGEQWQVTPSDEVLASFRSALSNENVYMIYG
NT seq
3525 nt
NT seq
+upstream
nt +downstream
nt
atgaattcgccgcgctttgtccatctccgtctccattccgaatactccatcgtcgacggc
aacgtccgtctggacgaggccgtcaaggccgccgccgccgatggcatgggcgccctggcg
ctgaccgacctcgccaacgccttcggcctggtgcgcttctacaaggaagcgcgcggcaag
ggcgtcaagcccgtcgtcggcgccgatgtgtggatcaccaatcacgatgagcgcgacaag
ccaggtcgcctgctgctgctggtgcgcaacaagcagggctacctgaacctgtgcacgctg
ctggcgcgggcgtggctgtcgaaccagcatcgcggccgcgcggagatcgctcccgagtgg
ttcgacgagcccggcgtggaagacgcgccgctgtccaccggcctgctggcattgtccggc
gcgatgggcggcgatgtcggcatggcgctggccaacggcaacgaggcgctggcgcgcaag
ctggcgacgcactggtcgcgcgtgtttccgcaggcgttctacatcgagctgcagcgcgcc
gggcaggccggtaccgaggcctacatccagcaggccgtgaagctggccgcgtcgatgcag
ctcccggtggtcgcgacgcatccggtgcagttcatgacgcaggacgacttcaccgcccat
gaggcgcgcgtctgcatcgccgagggcgatctgctggccaacccgcgccgcacccggcgt
ttcagcaccgagcagtatttcaagaagcaggacgagatgtgcgcgctgttcgccgatatc
ccgtccgcgctggccaacacggtgcagatcgcgcagcgctgcaacctgacgctggaactg
ggtaagcccaagctgccgctgttccccacgcccgacggcatgtcgctggacgactacctc
gtccacctggccaaggacgggctggaaaagcgcatggaagtgctgttccccgacgcggcc
gtgcgcgaggccaagcggcccgagtattacgcgcggctggagttcgagaccggcaccatc
atcaagatgggcttcccgggctacttcctgatcgtggcggacttcatcaactgggccaag
aacaacggcgtgccggtggggccgggccggggctcgggcgcgggctcgctggtggcgtat
gcgctgggcatcaccgacctggacccgctcaagtacaacctgctgttcgagcgcttcctg
aacccggaacgcgtgtcgatgcccgacttcgacatcgacttctgccagcacggccgcgac
cgcgtcatccactacgtgaaggagaagtacggcaaggacgccgtctcgcagatcgccacc
ttcggcaccatggccgccaaggccgccgtgcgcgacgtgggccgcgtgctggacctgggc
tacaacttcgtcgacggcgtggccaagctgatcccgttcaagccgggcaagctcgtcacg
ctggaggaagccaagaaggaagagccgctgctggccgagcgcgaggccaatgaagaagaa
gtcaagcagctgctcgaacttgcccagcgtgtcgaaggcatgacgcgcaacgtcggcatg
cacgcgggcggggtgctgatcgcgccgggcaagctgaccgatttctgcccgctctacacg
cagggcggtgaggatgccggcgtcgtcagccagtacgacaaggacgacgtggaagccgtc
ggcctggtcaagttcgacttcttgggcctgaccacgctcaccatcctggactgggccgag
cgctatatccgcatgctcgatccgtccagggcggattggaactgcagccacatcccgctg
aacgacaaaccggcgttcgacatcctcaaggccgccaatacggttgccgtgttccagctg
gaaagccgcggcatgcagggcatgctgaaggacgccaagcccgaccgctttgaagacatc
atcgccctggtggctttgtaccgcccgggcccgatggacctgatccccagcttctgtgcc
cgtaagcacggccgcgagaaggtggagtaccccgacccgcgcgtcgagccggtgctcaag
gagacctacggcatcatggtctaccaggagcaggtgatgcagatggcgcagatcgtcggc
ggctactcgctcggcggcgccgacttgctgcgccgtgcgatgggcaagaagaaggccgaa
gagatggccgagcaccgcgagctgttccgcggcggcgcggccaaggacggtctgtccacc
gagaaggccgacgagatcttcgacctgatggagaagttcgcgggctacggcttcaacaag
tcgcacgcggcggcgtatgcgctgctggcgtactacaccgcgtggctcaaggcgcatcac
ccggccgaattcatggcagccaacatgtcgctggccatggacgacaccgacaaggtcaag
atcctctacgacgacgcggccggcaagaatggcctcaaggtgctgccgcccgacatcaac
gccagcctgtaccgcttcacgcccaccgacgccaagaccatccgctatggcctgggcggc
gtgaagggcagcgggcagggtgccatcgaagacatcctgcgcgcgcgggaggacggtccg
ttcaaggacctgttcgacttctgcgagcgcgtcgatcgccgccaggtcaaccgccgcacc
atcgaagcgctggtgcgggccggcgccttcgatagcctcaacgacaaccgcgcgcaactg
ctggtctcgatcggcctggcgatggaggctgcggagcagaaggcggcagcggccaaccag
gtatcgctgttcgacctgatgagcggcgaggatgccgaggagcatcgccccgaactgctc
gacgaggcaccctggagcaccaagcgcaagttgcaggaagagaagcaggcgctgggcttc
tacctgtcgggccacctcttcgacgaatgtcgcgacgaggtccgccgctttgcccggacg
accctcgccgacctggcccgcgaggtcaacggcaacggcaacggtaatggcggtggctat
ggcagtcgtgacgcgcgcaacaagaccgtgtccggcgtgatcgtcggcctgcgcacgcag
atgacccagcgcggcaagatgatcgtcgtcatgctcgatgacggctcgcagagcgaggcc
accgaagtgacggtcttcaatgagctgttcgacgccaaccgcgggctgttcaaggaggac
gaagtgctgatcgtgcagggcaacgcgcggcacgacaccttcaccggcggggtgcggatg
acggccgaggccgtgatggacctgacccaggcgcgctcgcgctatgccgaggcgctgggc
ctggtgctgcgcgacgacgcctccgccgcgcggctgcgcgagctgctgacgccgtatctg
gcgacccaggcgtccggcgtgcgggtgcatatcagctacgccgccaacggcgcgtgctgc
aaagccgtgctcggcgagcaatggcaggtgacgccgtcggacgaggtgctggccagcttc
cgctcggcgctgtcgaacgagaacgtctacatgatctacggctga
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