Ralstonia pseudosolanacearum GMI1000: RSc1349
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Entry
RSc1349 CDS
T00071
Name
(GenBank) putative type III effector protein
Organism
rso
Ralstonia pseudosolanacearum GMI1000
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NEL
Motif
Other DBs
NCBI-ProteinID:
CAD15051
UniProt:
Q8XZP6
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Position
1435728..1437785
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AA seq
685 aa
AA seq
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MPTRVPSPTLGRSHPVTGAASTATSTAATATRSGPATAPASGRSREGLLAELPTGRTART
PSVSAAGAHAGRPAWNVQGAIEAMAALSPEREKRLFKKSASPQYRYAKGLTAEQRGQLES
ALEQRFRNPAAPAEARDSALAMWLSVQQARLRTHTAGHRNHHNLEQFQLAALSVPIPLLA
LGYRRQRRRYYSSPLRPEYRTAFNNFMRVIGDPSLSEAVRQTVAQRLEYHRRSEETIARH
ERQLLGEHGVMGLAESGYQIGTNYDHVNLTALEREAVVESRGSGVPPALHIQALQTERSR
VESGALRHQWLTRELRDAQARAGQGEAVAASAGPSSVRQVDAAESSAAAARLRRDTANDI
RRLRRPLAAEIKQWLKLAHAEPLPDPKAFDNELYANAFARLLERRRPLSLISYFARWDPV
VVDGAKVIQAIAKDANLRKEVFAAAETALGTCGDNVADGFANIVTMVDTHQLVDDVRSGK
LDQPALEAWGRQRYRLDSLITEVNQWMASRRRQAGQHSIMTERRVAREPLETMLHAKVAL
KTVLDLPKNLPSSMRHRLASALKPDDLKRLAETVQAKEADPVELARYLLSNDAWRGAMKA
LHPAAFAALRKRFAPEKDALAKEIPPQPTDPEGLEFLDERMAYAERTDAFTQKCRAAEDT
LLLSLAGRYALVPAVVGAGPSQGSR
NT seq
2058 nt
NT seq
+upstream
nt +downstream
nt
atgccaacccgcgttccgtcccccacccttggccgctcccatcccgtgacgggagcggcg
tcgaccgctacctccaccgctgccaccgcgacgcggtcgggccccgccacggcgcccgct
tccggacgatcccgggagggcttgctggcggagttgcctaccgggcgtacggcccgcacg
ccatccgtcagcgccgccggcgcgcacgcggggcggccggcgtggaatgtgcagggcgcc
atcgaggccatggccgcgctttcgccggaacgggagaagcgcctgttcaagaagtccgcc
tcgccgcagtaccggtacgccaagggcttgacggcggagcagcgcgggcaactggagtct
gcgctggagcagcggttccgcaatcccgcggctcccgccgaggcccgggattcggcgctg
gcgatgtggctgtccgttcagcaggcgcggttgcgcacgcatacggccggccatcgcaat
catcacaatctcgagcagtttcaactggcggccttgagcgttccgatcccgctgctggcg
ctgggctatcgcaggcagcggcggcggtactactcctcgccgctgcggccggaatatcgg
acggcgttcaacaacttcatgcgcgtcatcggcgatccctcgctgagcgaggcggttcgc
cagacggtcgcgcagcggctcgaatatcaccggcgcagcgaagaaaccatcgcccggcac
gaaaggcaactgctcggggagcacggcgtaatggggcttgccgaaagcgggtatcagatc
ggcacgaactacgatcatgtcaacctgaccgcgctggagcgggaggcggtggtcgagagc
cggggaagcggggttccaccggcgctgcacatccaggccttgcaaacggagcgctcgcgc
gttgagagcggggcgctgcggcatcagtggctgacccgcgaactgcgcgatgcgcaagcg
cgcgcggggcaaggcgaggctgtcgccgcttcggccggcccgtcgtctgtgcggcaagtc
gacgcggcggagtccagtgccgccgcggcccgcctgcgccgggataccgccaacgatatc
aggcgactgcggcggccgcttgcggcggagatcaagcagtggctcaagcttgcgcacgcg
gagccgttgccggaccccaaggctttcgacaacgaactgtacgccaacgcgttcgcccgt
ctgctggagcgccgccggccgctgagtctgatctcctatttcgcccgctgggatccggtt
gtcgtcgatggggcgaaggtcatccaggccattgcgaaagacgccaacctgcgcaaggag
gtgtttgccgcggcggaaaccgccttgggaacctgcggcgacaatgtggccgatgggttt
gccaacatcgtgacgatggttgacacgcatcagctcgtggacgacgtgcgcagcggcaag
ctggaccagccggcactggaggcttggggacgccagcggtaccgcctggacagcctgatc
acggaagtcaatcaatggatggcgagccggcgacgccaggcggggcagcactccatcatg
accgagaggcgcgtggccagggagccgctggaaacgatgctgcatgcgaaggtcgcgttg
aaaacggtactcgacctgcccaagaaccttccctccagcatgcgtcatcggcttgccagc
gcgctcaagccggatgatctgaagcggttggccgaaaccgtgcaggcgaaggaagccgat
ccggtcgagctggccaggtacctgctcagcaacgacgcgtggcgtggcgccatgaaggcg
ctgcaccccgccgcgtttgccgcgctgcgcaagcgttttgctccggaaaaggacgccctc
gccaaagagataccgccccagcccacggaccccgaggggctcgaattcctggacgagcgg
atggcctatgcggaacgcacggatgcgttcacgcaaaaatgccgtgccgccgaggacaca
ctcctgctgtcgctcgccgggcgctacgcgctcgtgcccgcggtggtgggcgccgggcct
tcgcaaggcagccgctag
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