Ralstonia pseudosolanacearum GMI1000: RSp0254
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Entry
RSp0254 CDS
T00071
Name
(GenBank) probable signal transduction eal-ggdef domains transmembrane protein
Organism
rso
Ralstonia pseudosolanacearum GMI1000
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAL
GGDEF
PAS_3
PAS_9
PAS_4
PAS
dCache_1
PAS_8
HAMP
Motif
Other DBs
NCBI-ProteinID:
CAD17405
UniProt:
Q8XT61
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Position
megaplasmid:328070..331606
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AA seq
1178 aa
AA seq
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MPKHAFFPTTLRGRLLALAAVAALPAVVVAIAGVALYRDRLTDHLEQRLSYETQSAAARV
GMVLSNADQLLSVVVADESVLRLDRDECTRFVSRVIHNQSDFATLGVADAHGKLVCTPVP
GAIGLDVADREFFRELIATGRPSLSNFLTGRTSHQPVIVATRAVVGPDGGIRGVAYAAIR
QSALMVAAGSASSGPVYLVDGAGTVLSGTHAALSGEGPGVTRGDLVSAAGPEPGATVFET
DADGTLRAYAAMAVPHATSGRLRLVRGIDATDMARQQRDVTLAGGGAIVLMLVLLLALIQ
MAMRRLVLPRVDALVDAARHYAAGDFSARVAEQGGARDELSLLERTFNEMRTAILRHDET
VHHLTERFQRVARATNDWIFDWDIATGESWANASLHRLLGSDALLAQGDEDGVSRTLTFQ
QFVHPEDMAAFGRGLRAALHSDRDAWHHVCRVIDASRAVRTVEIRASIYRGKDGRAVRMV
GGVTDISQRSAMEADLRASEANLRVAEQIALLGSWRWDVLRDTATWSSGMYLLTGVSPGP
PPSFAQQAQFFTGDSYNRLREAASRAVTEGVPYSLELEMIRRDGEHRWVLSRGNIERNER
EEVVALFGTMQDITERRESDEQLRLLRRVVESVPSGITVADAQQPDLPLVYVNPGFERMT
GYRAEEVLGRNCRFLHSSEPGQPALNEVRAALRDASEIRVLLRNFRKDGHAFLNNFLLSP
VRDSQGAVTHYVGIQDDVTEQEMTRARLAQHATVDPLTGLPNRTLLADRVQQGVEMAARQ
RSRFYVALINIDRFKVVNDSLGHLLGDEVLRRIAERLRDAADTVDTVARFGGDVFALVIS
HAGSHGTDLGFDLFAEPIRVEGHEVFVTASIGVAEYPAHGSDSETLVRHAEMAMYFAKQN
GRNRLEFFAPEMDIGVSYRLNLEHQIRAALEQGQFRLLYQPQIDTKTGRICGLEALIRWI
HPTRGLLPPAAFIPVAEESGLVVEIGNWVLAEAAQQRAAWHARGLGEDLTIAVNVSPLQF
KRGTVLPTLLRLQRQHGLGSGFLELEVTESMLMEGTERTIEDLTAIRQLGVRIAIDDFGT
GYSSLAYLKRLPIDLIKIDRAFVKDIDRDSNDAAICTTVVVLAHNLGVKVCAEGVEDAAQ
SAFLASHQCDVLQGYYFSEPLLPEAVTALLERDARFTV
NT seq
3537 nt
NT seq
+upstream
nt +downstream
nt
gtgccgaagcatgctttctttcccaccacgctgcgcggtcgcttgctcgccttggccgct
gtggccgcgttgccggccgtcgtcgtggcgatcgccggcgtggcgctctatcgggaccgg
ctgaccgatcacctcgaacaacgtctctcgtacgaaacccagagcgccgcggcgcgcgtg
ggcatggtgctgtccaacgcggaccagctgctgtcggtcgtggtggcggacgaatccgtc
ctgcgcctggaccgcgacgaatgcacccgcttcgtcagccgcgtcatccacaaccagagc
gacttcgccacgctgggcgttgccgatgcgcacggcaagctggtgtgcacgccggtgccg
ggggccatcgggctcgatgttgccgaccgcgagttttttcgcgagctgattgcgacaggg
cgtccgtcgctgtcgaatttcctgaccggccggacttcgcaccagcccgtcatcgttgcg
acgcgcgccgtggtcggccccgacggcggcatccggggcgtggcctacgcggcgatccgg
cagagcgcgctgatggtggcggccggcagcgcgtcgtcggggccggtctacctggtggac
ggcgcgggcacggtgctgtccggcacgcatgccgccctgtccggcgaggggcccggcgtc
acccggggcgacctggtgagcgcggccggccccgagcccggcgccacggtcttcgagacc
gacgccgacggcacgctgcgcgcctatgccgcgatggccgtgccccatgcgaccagcggg
cggctgcgcctcgtgcgcggtatcgatgcgaccgacatggcgcgccagcagcgcgacgtg
acgctggccggcggcggcgccatcgtgctgatgctggtgttgctgctggcgctgatccag
atggcgatgcggcgcctggtgctgccgcgcgtcgatgcgctggtcgatgccgcacggcac
tatgccgcgggtgacttctccgcgcgcgtggccgagcagggcggcgcccgcgacgagctg
tcgctgctcgagcgcaccttcaacgagatgcgcacggccatcctgcgccacgacgagacc
gtccaccacctgaccgagcgcttccagcgcgtggcgcgcgccaccaacgactggatcttc
gactgggacatcgccacgggcgagtcctgggccaacgccagcctgcaccgcctgctcggc
agcgacgcgctgctggcgcagggcgacgaggacggcgtgtcgcgcacgctgaccttccag
cagttcgtgcatcccgaagacatggcggcattcggccggggcctgcgggccgcgctgcat
tcggatcgcgatgcctggcaccacgtctgccgcgtgatcgacgccagccgcgcggtgcgc
acggtggagatccgcgccagcatctatcgcggcaaggacgggcgcgccgtgcgcatggtc
ggcggggtcaccgacatctcgcagcgctcggccatggaggcggatctgcgcgccagcgag
gccaacctgcgcgtggccgagcagatcgccctgctcggcagctggcgctgggacgtgctg
cgcgacaccgccacctggtcgtcgggcatgtacctgctgaccggcgtgtcgccggggccg
ccgccgtcgttcgcgcagcaggcgcagttcttcaccggcgacagctacaaccgcctgcgc
gaggcggccagccgcgccgtcaccgagggcgtgccgtactcgctggagctggagatgatc
cgccgcgacggcgagcaccgctgggtgctctcgcgcggcaacatcgagcgcaacgagcgc
gaagaggtggtggcgctgttcggcaccatgcaggacatcaccgagcggcgcgagtccgat
gagcagttgcgcctgctgcggcgcgtggtcgagtcggtgccgtcgggcatcaccgtggcc
gatgcgcagcagccggacctgccgctggtctacgtcaaccccggcttcgagcgcatgacc
ggctaccgcgcggaggaggtgctgggccgcaactgccgcttcctgcattcgtccgagccg
gggcagcccgcgctgaacgaggtgcgcgccgcgctgcgcgatgccagcgagatccgcgtg
ctgctgcgcaatttccgcaaggacggccatgcgttcctcaacaactttctgctctcgccg
gtgcgcgacagccagggcgcggtcacacactacgtcggcatccaggacgacgtgaccgag
caggagatgacacgcgcgcgcctggcccagcacgccaccgtcgatccgctgaccggcctg
cccaaccgcacgttgctggccgaccgcgtgcagcagggggtggagatggccgcgcgccag
cgcagccgcttctacgtcgcgctgatcaacatcgaccgcttcaaggtcgtcaacgacagc
ctggggcacctgctgggcgacgaggtgctgcgccgcatcgccgagcgcctgcgcgatgcg
gccgacaccgtcgatacggtggcgcgcttcggcggcgacgtcttcgcgctggtgatctcg
cacgcgggctcgcacggcaccgatctcggtttcgacctgttcgccgagccgatccgcgtg
gaggggcacgaggtgttcgtgaccgccagcatcggcgtggcggagtatccggcgcacggc
tcggacagcgagaccctggtgcgccacgccgagatggcgatgtatttcgccaagcagaac
ggccgcaaccggctggagttcttcgcgcccgagatggatatcggcgtgtcgtaccggctg
aacctggagcaccagattcgcgccgcgctggagcagggccagttccgcctgctgtaccag
ccgcagatcgacaccaagaccggccgcatctgcggtctggaggcgctgatccgctggatc
cacccgacgcgcgggctgctgccgccggcggcgttcatcccggtggccgaagagagcggg
ctggtggtcgagatcggcaactgggtgctggccgaagccgcgcagcagcgcgccgcatgg
catgcgcgcgggctgggcgaggacctgaccatcgcggtcaacgtatcgccgctgcagttc
aagcgcggcaccgtgctgccgacgctgctgaggctgcagcgccagcatggcctgggctcg
ggctttctcgagctggaggtgaccgagtcgatgctgatggagggcaccgagcgcaccatc
gaagacctgaccgccattcgccagctgggggtgcgcatcgccatcgacgacttcggcacg
ggctattccagcctggcgtacctcaagcgcctgccgatcgacctgatcaagatcgaccgt
gccttcgtcaaggacatcgaccgcgactccaacgacgcggccatctgcacgacggtggtg
gtgctggcccacaacctgggcgtgaaggtgtgcgcggaaggcgtcgaagacgcggcgcag
tcggccttcctcgcctcccaccagtgcgatgtgctgcagggctattacttctccgagccg
ctgctgcccgaagccgtgacggcgctgctggagcgcgacgcgcgcttcacggtgtag
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