Rhodovulum sulfidophilum: NHU_01375
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Entry
NHU_01375 CDS
T04143
Name
(GenBank) deoxyribodipyrimidine photo-lyase family protein
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
rsu
Rhodovulum sulfidophilum
Brite
KEGG Orthology (KO) [BR:
rsu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rsu03400
]
NHU_01375
Enzymes [BR:
rsu01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
NHU_01375
DNA repair and recombination proteins [BR:
rsu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
NHU_01375
Prokaryotic type
NHU_01375
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
BAQ68534
UniProt:
A0A0D6B1F2
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Position
1443628..1444857
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AA seq
409 aa
AA seq
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MGVTILSFGRDLRVEDHPALARAGQEAGAEGGAVLPVFIVDPAVWSAPEASARQWRVVAE
GLASLSAALAARGAALQVEIGPPAEVLDRLAARWPVSRGLALGAQPPSEAWARRRGLPWR
PVAAPRRPAPPLGELTAPPGLEPGPIPEARDLGLGFDPCPGRPRGGRSEAERALAAALAG
GDPDAALSAHLAWGALSAGEAARSPRLAPEEAGARRLASWLARRARFQRIPAADPAPVAA
PPDPGADARLAAWARGETGLPAVDAAMRALIHDGMLDAGRRGLLAAVGCGQLGLDPGACC
RVLARLSADYDPRLHGVQFRAAAARRVDPLRWARAADPEGVFLRRWLPELADLPPDALHA
PWTCPAAARRLGRRYPHPLVAPGPGRPAGSRSASPAARRQDSRQLAFDL
NT seq
1230 nt
NT seq
+upstream
nt +downstream
nt
atgggcgtgacgattctcagcttcgggcgcgatctgcgggtggaagaccatccggcgctg
gcccgtgcgggccaggaggcgggcgcggaaggcggtgcggtcctgccggttttcatcgtc
gatccggcggtctggtcggcgcccgaggcctctgcgcggcaatggcgtgtggtggccgag
ggtctggcctcgctttcggccgcgctcgcggcgcggggcgcggcgctgcaggtcgagatc
gggccgccggccgaggtgctggaccggcttgccgcgcgctggccggtctcgcgcgggctg
gcgctgggcgcccagccgccatccgaggcctgggcgcggcggcgcggcctgccctggaga
cccgtcgccgcgccccggcgcccggctccgccgctcggcgagctgaccgcgccgcccggg
ctggagccgggaccgatccccgaggcccgcgatctggggctcggtttcgatccctgcccg
gggcggccgcgcggtggccggtccgaggccgagcgggcgctggccgcggcactggcgggc
ggcgatcccgatgccgcgctgtcggcgcatctggcctggggcgcgctatcggcgggcgag
gcggcgcggtcgccccgccttgcgcccgaagaggcaggcgcgcgccgactcgcttcctgg
ctggcccggcgcgcccggtttcagcggatcccggccgccgatcccgcccctgtggccgcg
cccccggaccccggggccgatgcgcgactggcggcctgggcgcgcggcgagaccgggctg
cccgcggtcgatgccgcgatgcgtgcgctgatccatgacggcatgctcgacgccgggcgg
cgcgggcttctggcagcggtcggctgcggtcaactggggctcgatccgggcgcctgctgt
cgggtcctggcgcggctctcggccgattacgatccgcgcctgcatggggttcagttccgc
gcggcggcggcgcggcgcgtcgatccgctgcgctgggcgcgcgcggccgatcccgagggg
gtcttcctgcgcagatggctgcccgagctggccgatctgccgcccgacgcgctgcatgcg
ccctggacctgcccggcggcggcgcggcgattggggcgccgctatccgcatccgctggtc
gcccccggtcccggccgaccggcgggctctcggtccgcaagcccggccgcgcggcggcag
gattcgcggcaactggccttcgatctctga
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