Raphanus sativus (radish): 108809005
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Entry
108809005 CDS
T06014
Name
(RefSeq) hydroxymethylglutaryl-CoA lyase, mitochondrial isoform X1
KO
K01640
hydroxymethylglutaryl-CoA lyase [EC:
4.1.3.4
]
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz00280
Valine, leucine and isoleucine degradation
rsz00650
Butanoate metabolism
rsz01100
Metabolic pathways
rsz04146
Peroxisome
Module
rsz_M00036
Leucine degradation, leucine => acetoacetate + acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
108809005
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
108809005
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
108809005
Enzymes [BR:
rsz01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.3 Oxo-acid-lyases
4.1.3.4 hydroxymethylglutaryl-CoA lyase
108809005
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Motif
Pfam:
HMGL-like
JUPITER
Motif
Other DBs
NCBI-GeneID:
108809005
NCBI-ProteinID:
XP_018436627
UniProt:
A0A6J0JLU8
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Position
6:complement(45394612..45396725)
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AA seq
412 aa
AA seq
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MQRNGMRRAHSLWCKSLTNNLHHHHHPSIPVTTTTMSSLEELSSIDRIQRRVTDCNDGKS
FCMHSRKVSQRQLLLGNSSVSGTLWESKHFHTLPHSLNKQHQLLREVPKFVKIVEVGPRD
GLQNEKNIVPTSVKVELIRRLVSAGLPVVEATSFVSPKWVPQLADAKNVMDAVNTLHGAA
RLPVLTPNLKGFEAAVSAGAKEVAIFASASESFSLSNINCSIEESLLRYRAVSTAAKEHS
IPVRAYVSCAVGCPVEGAVPPSKVAHVVKELYDMGCFEISLGDTIGIGTPGSVVPMLEAV
MAAVPAEKLAVHFHDTYGQALANILVSLQMGINIVDSSVAGLGGCPYAKGASGNVATEDV
VYMLNGLGVQTNVDLGKLIAAGDFISKHLGRPNGSKAAVALSHQITADASKL
NT seq
1239 nt
NT seq
+upstream
nt +downstream
nt
atgcagaggaatgggatgagaagagcccattctttatggtgcaagagtttaacaaacaac
ttgcatcatcatcatcatccgtctattccagtcaccaccaccaccatgtctagtttggag
gagctgagctccatagacaggatccagaggagggtaacagattgcaatgatggtaaaagc
ttctgtatgcattctcggaaagtatctcaacgacaacttttacttgggaactcatcagtt
tctggcactctatgggaatccaaacattttcacaccttaccacattcacttaacaagcag
caccagctccttagagaagtacccaagtttgtgaagattgtagaagttggtccaagggat
ggccttcagaacgagaaaaacattgttcccacttctgttaaggtcgaactcattcggaga
ttggtttctgctggtttgcccgttgtcgaagctactagctttgtctctcctaaatgggtt
ccccagcttgcagatgcaaagaatgtaatggatgcagttaatactctacatggggcggct
cgattgcctgttcttactcccaatcttaaaggttttgaagcagctgtctctgcaggtgct
aaggaagttgcaatctttgcatcggcttccgagtcattctctttgtcaaatattaactgt
tccattgaagagtctctcttgagatatcgtgctgtttccaccgctgcaaaggagcattcc
attcctgtccgtgcgtatgtatcttgcgcggtggggtgtccagtggaaggagcggttcca
ccttcaaaagtagcgcatgttgtcaaagagctctatgacatgggctgctttgagatttct
cttggtgatacaattggaatcggcactcctggttctgtggttcccatgcttgaagccgtg
atggcagctgtgccagcggaaaaactggctgttcacttccacgatacctacggacaagct
cttgcaaacatattggtctctctccaaatgggaataaacatagtagactcatcggttgct
ggattagggggttgcccatatgcaaaaggagcgtcaggaaatgtagcaacagaagatgtg
gtttacatgttaaacggtttgggggtccaaaccaacgtcgacttgggaaagctaatagct
gctggagatttcatcagcaagcatcttggccgtcctaacggttccaaagccgctgttgct
ctcagccatcagatcacagctgatgcctccaagctatga
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