KEGG   Raphanus sativus (radish): 108812769
Entry
108812769         CDS       T06014                                 
Name
(RefSeq) zinc finger CCCH domain-containing protein 5
  KO
K24273  U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa subunit-related protein
Organism
rsz  Raphanus sativus (radish)
Brite
KEGG Orthology (KO) [BR:rsz00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:rsz03041]
    108812769
Spliceosome [BR:rsz03041]
 Complex A
  U2 snRNP components
   U2 related factors
    108812769
 Complex B
    108812769
SSDB
Motif
Pfam: zf-CCCH RRM_1 zf_CCCH_4 zf-CCCH_4
Other DBs
NCBI-GeneID: 108812769
NCBI-ProteinID: XP_018440617
UniProt: A0A6J0JY52
LinkDB
Position
8:complement(1663426..1667396)
AA seq 730 aa
MTEPQSEKPEEGERLEESMEESKEKSAEMSRKEKRKAMKKLKRKQVRKEIASKEREEAEA
KLNDPAEQEKLKAIEEEEARKREKELKEFEESERAWREAMEIKRKKEEEEERRWKELEES
RKLLEASKDEDEDDDEYEYIEEGPPEIIFKGNEIILRKNKVRVPKKTVAQVDVNEIADRP
TSNPLPPGTEALSKSQNVSSAQQILDSVAQEVPNFGTEQDKAHCPFHLKTGACRFGPRCS
RVHFYPDKSCTILMKNMYNGPGIAWEQDEGLEYTEEEAEHCYEEFYEDVHTEFLKFGELI
NFKVCRNGSLHLKGNVYVHYRSLESALLAYQSINGRYFAGKQVNCEFVNISRWKVAICGE
YMKSRLKTCSRGSACNFIHCFRNPGGDYEWADYDKPPPRFWIRKMTALFGYSDEYLKHTE
REYSGSLSDVRSDQPTDSQRQPSRRSRSREHDHVRPSYRSRTNHSDTRESTRGHKLSRHE
ESCHGGDGSPRGTRDGSVEREMMYKEPRYGKETSRHESKWSEHSPGHGVTRKRRIHGRYS
DDDDDDSGEPSHKRKRSRRYGRRGSDSEVQGEVDDEEDARTHRSSSDRRSRKEGSSAADQ
KENHGDDRVHAVGEKSQRERSSSRYSHEGDSSESRHRPHKDRDINKHRRRYKTGDPDSSD
RSMKGKQGRESQEVERNGKRENVSGSSSDDEEREERHRERSGSRHRKRRRSHEQTPPKGP
EEEIERWRPI
NT seq 2193 nt   +upstreamnt  +downstreamnt
atgacggagccgcagagcgaaaagccggaagaaggagagcgactcgaagaatcgatggaa
gagagtaaagagaaatcggcggagatgagccgcaaggagaaacgaaaagcgatgaagaaa
ctgaagaggaagcaggtgaggaaggagatagcatcgaaggagagagaagaggcggaggct
aagttaaacgatccggcggagcaggagaagctgaaggcgatcgaggaagaggaggcgcgg
aaaagagagaaggagcttaaagagttcgaggagagtgagagagcttggagagaggctatg
gagattaagaggaagaaagaggaggaggaagagaggcgttggaaggagttagaggagtcg
agaaagcttcttgaggctagtaaggatgaggatgaggatgatgatgaatatgaatatata
gaagaagggcctccagagattatattcaagggtaatgagatcattctcaggaagaacaaa
gtgagggttccaaagaaaacagtagctcaggtggatgtaaatgagattgctgacaggcct
acatcaaatcctctacctcctggaacagaagctttgtcaaagtctcagaatgttagttct
gctcaacagattctggatagtgttgcacaggaagttcccaactttggtactgagcaggat
aaagctcattgtcctttccatttaaagactggagcttgtcgatttggcccgcgttgcagc
agagttcatttctaccctgataaatcgtgcactatacttatgaagaacatgtataatggt
cctggcattgcttgggaacaggatgaggggcttgagtatacagaagaggaagctgaacat
tgttacgaagaattttatgaagatgttcatacggagttcctgaagtttggagaacttatc
aatttcaaagtatgtagaaatggctcactccacttgaagggcaatgtgtatgtacactac
agatcactggaatcagctcttcttgcctaccagtccattaatggtcgatattttgccggt
aaacaggtgaactgcgaatttgtcaacatctcaagatggaaagtcgccatatgcggggag
tacatgaagtcgaggcttaaaacttgctctcgtggatctgcgtgcaactttatccattgt
ttccgaaaccctggtggagactatgaatgggctgactatgacaaaccacctccgagattc
tggattcgcaaaatgaccgctttatttggttattcagatgaatacttgaagcacacggag
cgtgaatattcagggtcgttaagtgatgttagatcagatcaaccaacagattcacagagg
caaccttcaagaagatctagatcgagggaacatgatcatgtgaggccttcttataggagc
cgtacgaatcacagtgatacacgggagagtactcgtggacacaaacttagtaggcacgaa
gagagctgtcatggtggagatggaagtcctagaggtaccagagacggtagtgtagagaga
gagatgatgtataaagagccacggtatggtaaagagacatcgcgtcacgaaagcaaatgg
tctgaacactctccgggacatggggtgacgaggaaaagaagaatccatgggaggtattcc
gatgatgatgatgatgattcaggagagcctagtcacaaacggaaacgctcaaggcgttat
ggcagaagaggctcagattcagaagttcaaggagaggtggacgatgaagaggacgctaga
acccatcggtctagttccgacaggaggtcaagaaaagaaggatcatcagctgctgatcag
aaggagaatcatggagatgatagggttcatgcagttggcgagaagtcgcagagggaaaga
agcagctcaagatattcgcacgagggagactcgagtgaaagtagacatcgtccgcataaa
gatagggacataaacaagcatagacgtagatacaagacgggtgatcctgattcttctgat
cgaagcatgaaaggaaaacaaggccgagaatcacaagaagtcgagagaaatggaaagaga
gagaatgtaagtggctcatcaagtgatgatgaggagagagaggaaagacacagagagaga
tctggtagtaggcataggaaacgaagaaggtcacacgagcagactcctcctaagggacca
gaggaggagattgagcgttggagaccaatatga

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