Raphanus sativus (radish): 108813481
Help
Entry
108813481 CDS
T06014
Name
(RefSeq) isoamylase 1, chloroplastic isoform X1
KO
K01214
isoamylase [EC:
3.2.1.68
]
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz00500
Starch and sucrose metabolism
rsz01100
Metabolic pathways
rsz01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
108813481
Enzymes [BR:
rsz01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.68 isoamylase
108813481
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ISOA1-3_C
Alpha-amylase
CBM_48
GHL10
Motif
Other DBs
NCBI-GeneID:
108813481
NCBI-ProteinID:
XP_018441553
UniProt:
A0A6J0K1J4
LinkDB
All DBs
Position
6:50669759..50675860
Genome browser
AA seq
786 aa
AA seq
DB search
MDAIKCSSTFLHRTNLNTLFSNHTFPKPRTPNFNRRAAQPLSLSSAKDRTRTTEPENVAV
VEKPLKSTRFLVSDGLPSPFGATVRDNGVNFSVYSSNSVSATICLISLSDLLQNKVTEEI
QLDPSRNRTGHVWHVFLKGDFEDMLYGYRFDGKLSPEEGHYYDSSTILLDPYAKAIISRD
EFGVLGGDDNCWPQMACMVPTLDDEFDWEGDMPLKLSQKDLVIYEMHVRGFTRHESSNIE
FPGTYQGVAEKLDHLQELGINCIELMPCHEFNELEYYSYNPILGDHRVNFWGYSTIGFFS
PMVRYSSASSRNFAGRAINEFKTLVKQAHKRGIEVIMDVVLNHTAEGNEKGPILSFRGVD
NSVYYMLAPKGEFYNYSGCGNTFNCNHPVVRQFIVDCLRYWVTEMHVDGFRFDLGSIMSR
SSSLWDAANVYGADIEGDLLTTGTPVSCPPVLDMISNDPVLRGVKLIAEAWDAGGLYQVG
MFPHWGIWSEWNGKFRDVVRHFIKGTDGFSGAFAECLCGSPNLYQGGRKPWNSINFVCVH
DGFTLADLVTYNNKNNLANGEENNDGENHNCSWNCGEEGEFVSISVKRLRKRQMRNFFVS
LMVAQGVPMIYMGDEYGHTKGGNNNTYCHDNYLNYFRWDKKEEAHDDYFRFCRLLIKFRD
ECESLGLDDFPTSKRLQWHGIAPETPDWSESSRFVAFSLVDSVKKEIYVAFNTSHLATLV
TLPNRPGYRWEPFVDTSKPSPFDCITHDLPGRETAMKQYRHFLDANIYPMLSYSSIILLL
SPIDDS
NT seq
2361 nt
NT seq
+upstream
nt +downstream
nt
atggatgcaatcaaatgcagctccaccttcctccaccgcaccaatctcaacactctcttc
tctaaccacacgttccctaaaccccgcacgcccaatttcaaccggcgagccgcgcagcca
ctctcgctttcctccgccaaggacagaacaagaaccaccgaacccgaaaacgtcgccgta
gtggagaaacctcttaaatcaacgagattcctcgtctcggacggactcccttccccgttc
ggcgccaccgttagagacaacggcgtcaatttctccgtttactcttcgaactccgtctcc
gcaaccatctgcttgatctccctctccgatctccttcagaacaaagtgacggaggagatt
cagctcgatccgtcgaggaatagaacgggccacgtgtggcacgtgttcttaaaaggtgat
ttcgaagatatgttgtacggttacagattcgatgggaagttatctcctgaagaaggtcat
tactatgactcctccactatcttattggatccttacgctaaggcaattattagtagggat
gagtttggagttttgggaggtgatgataattgttggcctcaaatggcttgtatggtgccc
actcttgatgatgagtttgattgggaaggggatatgcctctgaagctttcacagaaggac
cttgtgatatatgaaatgcatgtgcgaggtttcacacggcatgaatctagcaacattgag
ttccctggcacgtaccagggtgttgcagagaagcttgaccatttgcaggagcttgggata
aattgcattgaattaatgccatgtcacgagtttaatgagctggagtattacagctacaat
ccgatattgggagatcacagggtaaatttttggggttattctaccattgggtttttctcg
cccatggtcagatactcatcagcaagctctcgcaactttgctggaagagccattaatgag
ttcaaaactcttgttaaacaagcacataaacgaggaattgaggttatcatggatgtcgtt
ttgaaccacactgccgaaggcaatgaaaaaggacctattttatcatttagaggagttgat
aatagtgtctattacatgcttgctccaaagggggagttctataattattcaggctgtggt
aatacatttaactgcaatcatcctgtagtgcgtcaattcatagtggattgcctgagatat
tgggtaacagaaatgcatgttgacggcttccgctttgatcttggttcaatcatgtcaagg
agtagcagcctttgggatgcagccaacgtttatggggctgatatagaaggtgacttgctg
accactggtacccctgttagctgccctcctgtacttgacatgataagtaatgacccagta
cttcgtggtgttaagctaatagctgaagcatgggatgctggtggcctttaccaagttggc
atgtttccacactggggtatatggtctgagtggaatggaaagttccgggatgttgttaga
cacttcataaaaggcaccgatggcttttccggtgcttttgctgaatgtctctgtggaagc
ccaaacttgtaccagggagggaggaaaccatggaacagcatcaattttgtatgtgtgcat
gatggttttactttggcagatttagtaacttacaacaataagaataacttggcaaatgga
gaagagaataatgatggagagaatcacaattgcagctggaactgcggagaggagggagag
tttgtgagtatctcggtgaagagattaaggaaacgacaaatgcgaaatttctttgtttcc
ctcatggttgcccagggtgtcccgatgatatacatgggagatgaatatggtcatacgaaa
ggggggaacaacaacacctattgccatgacaactatttgaactattttaggtgggataaa
aaggaagaagcacatgatgactacttcagattctgccgtcttctgatcaagtttcgtgat
gaatgtgaatcacttggccttgacgacttcccaacatcaaagcgtctgcaatggcatggt
attgctcctgagacgccagattggtctgaatcaagtcgatttgttgcattttcactggtg
gattcagtgaagaaagaaatatatgtagccttcaacacgagtcacttagccacacttgtt
acactgcctaaccggcctggataccgatgggagccattcgtagacacgagcaaaccaagc
cctttcgactgcataacacatgatctcccagggagagaaacggcgatgaagcaatacaga
cacttcttagatgcaaatatttacccgatgctcagttactcttccatcatcctcctcctt
tcacctatcgacgacagctga
DBGET
integrated database retrieval system
