Raphanus sativus (radish): 108813537
Help
Entry
108813537 CDS
T06014
Name
(RefSeq) protein TRANSPARENT TESTA 9
KO
K19513
protein CLEC16A
Organism
rsz
Raphanus sativus (radish)
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rsz04131
]
108813537
03029 Mitochondrial biogenesis [BR:
rsz03029
]
108813537
Membrane trafficking [BR:
rsz04131
]
Autophagy
Mitophagy
PINK1-Parkin associated proteins
108813537
Mitochondrial biogenesis [BR:
rsz03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-dependent mechanism factors
108813537
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FPL
CLEC16A_C
Motif
Other DBs
NCBI-GeneID:
108813537
NCBI-ProteinID:
XP_056845227
UniProt:
A0A9W3C138
LinkDB
All DBs
Position
6:23978615..23983420
Genome browser
AA seq
851 aa
AA seq
DB search
MWFSFLRPRDRFSLLELRHLTEQLRKIQIVNETNKDFVVEALRSIAEILTYGDQHDPSFF
EFFMEKQVMGEFVRILRVSRTVTVSVQLLQTMSIMIQNLKSEQAIYYLFSNEYVNYLITY
TFDFQHEELLSYYISFLRAVSGKLNKHTISLLLKTENDVVVSFPLYVEGIKFAFHEENMI
RTAVRSLTLNVYHVGDESVNDYVVSPPHTEYFSKLVSFFQKQCIDLSAMVLNTLESPSSD
SGGKLFSAVDGIEDTLYYFSDVISAGIPDIGRLVTDHILQNLTLPLLLPSLCSEAVNDVS
IDPITSLYLLCCILRIVKIKDLANITAATLFCPVKAFIASFLVKPNSSLAPERPRFGHRH
QDNGVAEEADQQCPSNGVLSEDGNSHVCSENTTKSTFNDSNITFRETLLQYISEGDDVQA
QGSLFVLATLLQTKELEESMLDAFGILPQRKQHKKLLLQSLVGEDSDEEQLFSPNGSMRD
GSSELDWCQRRLEEHFGVCCSLRGAAVSPLIHRHQVVDALVSLLCRENISAETLWCGGWL
LRQLLPYSQAEFNHKHLKMLNDSYEKCKEALIREIKGSWPDLLIKVLFDEWKKCKKVIEA
PSPQKDPISVILQLDRCSSNDNTVSDSSFTAGEKLCEVVKVFVLLHQLQIFLLGRPLPEQ
PPIHPPADRSETSRATASGLDASVPKPGTEVKLVDAVPCWIAFERGKEREFSFLALSSGV
SGWIVLAEKSLSKPDHGIVRIIAPLAGCDPRIDEKQPRWLHLRIRPSTLPFLDPIKRGVY
KKLKSKGLVDGKWTVAFRSDEFCHSAYSMVVHEMDLQCSEVERRLKPLLELDRNQQDQST
ITSDAFPSSSS
NT seq
2556 nt
NT seq
+upstream
nt +downstream
nt
atgtggttttccttcttaagacccagagatcgattctccttgctcgaactcaggcatctg
actgagcagttgaggaaaattcagatagtgaacgagaccaataaggactttgttgtggag
gcactgagatcaatcgcggagatactaacctacggcgatcagcatgatccctcattcttt
gagttttttatggagaagcaagtcatgggagagtttgtacgtatcttgagggttagcaga
acagtaacagtttctgttcagttgttgcagaccatgagtattatgatccagaacctcaaa
agtgaacaagccatctactacttgttcagtaacgaatatgtaaactatttgataacatat
acgtttgacttccaacatgaagagcttctatcttactacatatccttccttagagctgtt
agtgggaaactaaacaagcatacgatatcattgcttttgaagaccgagaacgatgtagta
gtttcttttcccctttatgtcgaaggcattaagtttgcatttcacgaagagaacatgata
cgcactgcagttcgttccctgactcttaatgtatatcacgttggtgatgaatctgtgaat
gactatgtagttagcccaccgcacaccgagtacttttcaaaactagtttcatttttccaa
aagcaatgcattgatctaagtgcaatggtgttgaacactttagagagcccatcctcagac
tcaggaggaaaattgttttctgccgttgatgggatcgaggacaccttgtactactttagt
gatgttatctctgctggcatacctgatatcgggaggctggtaacagatcacattctgcag
aatctaactctcccacttcttctcccgtctctatgctctgaggctgtaaatgatgtttca
attgatcctatcacttctctatatctcctttgctgcatcctacggatagttaaaatcaaa
gatttggcaaatattaccgctgctactcttttctgccctgtaaaagctttcattgcaagt
ttcctagtgaagcctaatagtagccttgctcctgaacgccctagatttggacataggcat
caagacaatggtgttgccgaggaagcagatcaacagtgtccaagcaatggagtattgagt
gaggatgggaattcccacgtttgcagtgaaaatactaccaaaagtaccttcaacgattca
aatattacatttagggagaccttacttcaatatatttctgagggagatgatgtgcaagct
cagggttccttgtttgtgctagccactttgttgcagacaaaagaacttgaagagtcaatg
ctagatgctttcggcattcttcctcagcgtaagcagcacaaaaaacttttgctgcaatct
ttggttggggaggactccgacgaagaacaactattttcaccgaatggttctatgagagat
ggaagtagtgaacttgattggtgtcaacggaggctggaggagcattttggagtatgctgt
tcattgcgtggggctgcagtgtccccccttatacatagacatcaggtggtggatgcattg
gtcagtcttctctgccgtgaaaacatatctgcagaaacattatggtgtggaggatggctt
ttgcgccagttgcttccttatagccaggcagaatttaatcataaacatctgaagatgctg
aatgattcatatgagaaatgcaaagaagcactaatccgggagattaaaggttcctggcct
gatctactcatcaaagtactgtttgatgagtggaaaaagtgcaaaaaagtgattgaagct
ccatctcctcaaaaagaccctatatctgttattctccagctggatagatgctcttctaat
gataacactgttagcgattcatcattcacagcaggggaaaaattgtgcgaggtggtaaag
gtttttgtgcttcttcatcaactccagatcttcttgcttggtaggcccttgccagagcag
cctcctatccatcctcctgccgacagatctgaaacgtctcgcgcaacagcttccggtttg
gatgcttcagtccccaaacctggcaccgaagtgaagctagttgatgctgtaccatgttgg
attgcctttgaaagaggcaaggaacgtgaattctcgtttctagcattatcatctggtgtg
tctgggtggatcgtccttgctgaaaagtcactttcgaagccagatcacggaatcgtccgt
attattgcacctttagccggctgcgatccgcgaatagatgaaaagcaaccaagatggcta
cacttgagaatccgaccatctacgttacctttcttggatccaataaagcgaggagtctac
aagaagctcaagtccaaaggtctagtagatggaaaatggacagtagcattcaggagcgat
gagttttgtcactctgcttactcaatggttgtacatgagatggatctacaatgcagcgag
gtggaaaggaggttaaagccattgcttgaacttgatagaaaccagcaagatcaatcaacc
attacttctgatgccttcccttcatcttcgtcctga
DBGET
integrated database retrieval system
