Raphanus sativus (radish): 108817235
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Entry
108817235 CDS
T06014
Name
(RefSeq) anaphase-promoting complex subunit 1 isoform X1
KO
K03348
anaphase-promoting complex subunit 1
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
108817235
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rsz04121
]
108817235
03036 Chromosome and associated proteins [BR:
rsz03036
]
108817235
Ubiquitin system [BR:
rsz04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
APC/C
Other subunits
108817235
Chromosome and associated proteins [BR:
rsz03036
]
Eukaryotic type
Sister chromatid separation proteins
APC/C complex
108817235
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ANAPC1
APC1_C
Apc1_MidN
APC1_3rd
PC_rep
Motif
Other DBs
NCBI-GeneID:
108817235
NCBI-ProteinID:
XP_056858742
UniProt:
A0A9W3D4J2
LinkDB
All DBs
Position
2:25711227..25724180
Genome browser
AA seq
1807 aa
AA seq
DB search
MSPGVRPLTVLGKFKPFGLIAEATDSNPPDDDNVAGSYQYFLFDPDLTGQRDDDDDGNEA
SFSRQREHELFIRDNRIIWTSGSRVLKRFTLSSPIIKACWSHIGRGAEAFLCVLQIGCLT
IYNTSGEVVSVPLPRTVVSIWPLPFGILLQQAAEMYPTSSIPFSSASPALGSREMLRQRK
EVGNISPQNFHSTVAHGLTSKRDLSASHLILRDPLEEPGPIYLEERGKLNIMKDYDERTI
WSSNLFPLLTSYNKGKMQHSVWAVEFIESSHEASASCSSSAVPDTVIPKRVSFRRIWQAK
GAKKAASKVFLATDDAVPVICFLILEQKKLLSVGLQTVEINNEIMFDVKPDISWSVSAIA
AAPVVVTRSHLKIGLLPHLDIIVLSPENDLFLYSGKQCLCRYVLPSWLGESLVSGESAKT
DSGSQDLKITGLSDAVLGCINLSVNHSQIFRCALTSNPSSSLANDCIAAMAEGLPSDLYK
LFLSLLWGYGYSDQKGCSIHFEWEALCNIFLGICQKPTGVHLKQLKTSSESSWEFLLSSK
FHKTYSRFHSGITSINPLDREEIVPFCTKTGSGDRPDNSFELMVQSLDCLHAVYESLKMD
NLRKQDLHQLAVLLCNIAKFLGEKCYIDHYIRDFPRLSKITGACKTLSSSRKPPNIFRWL
ENCLRRGCLSTNLDDLPDLIRKDGCSTVNWARKIVSFYSVLFGDKPVGKKLTSGVPCNIA
PGSYSSNEELAILAMTGERFGLHQLDLLPSGVSLPLRHALDSCRESPPADWPAIAYVLLG
REDMAQSVFRNLSSSKEFEMQSNTSLISMSIPYMLHLHPVIVPSSLSESIGLENAKIEDT
NSVDGSVIDGMEHIFNSYTQLRYGRDLRLNEVRRLLCSARPVVIQTSANPTISDQEQQQD
QLWRIAQRTAVLPLGRGAFTLSTIHTLLTEAFTVPKLVLAGRLPAQQNAVVNLDPNVRSI
QELKTWPEFHNAVAAGLRLAPLQGKVSRTWIKYNKPGEPNAVHAGLLFGLGLQGYLHVLN
LSDIYQYFTQDHESTTVGLMLGLAASYRRTMQPDIAKALFFHVPTRYQASYADFEIPTLL
QSAALVSVGILFEGSAHLQTMQLLLGEIGRRSAGDNVLEREGYAVSAGFSLGLVALGRGG
DALGSLDSFVNRLLQYLGAKEERSLLAPSNEDLRSAAQVTDGSTPNVNITAPGAIIALAL
MYLKTDSEVIFSKLSIPQTRYDLECVRPDFIMLRVIARNLIMWSRIRPKSDWILSQVPEV
VKNGVSHLQDDMDDMYEVDVESLVQAYVNIVTGACISLGLRFSGTRDGNARDLLNSYALY
LLNEIKPVSAPPGNAFPKGISRYVDRGTLEMCLYLIVLSLSVVMAGSGDLQIFRLLRFLR
SRNSADGHANYGTQMAVSLATGFLFLGGGMRTFSTSNGSLAMLLITLYPRLPSGPNDNRC
HLQAFRHLYVLATEARWLQTIDVDSGLPVYAPLEVTVKETELYSETRYSEVTPCILPERA
ILKRICVCGPRYWPQQVELVPEEKHWWSFGDKSDPFNSGVIFVKRKVGACSYVDDPVGCQ
SLLSRAMHKVFGLRTLDESNSLANSHRELDSDSVDHLVSTFSSDPSLIAFAQLCCDKSWN
DRSDSDFKEFCLQVLFDCISKDRPALLQVYLSLYTTIGSMADLLVKSDSHMCDSLSISSL
KVALAYNEAVTSGRLASSGGFVQSIFLASLGKRCEEILNCSTELKTNLRDYLTSEAWPDD
DQKDVILLSWYLKWFSVPSPSIIKAVVEKIKSKSKISTSAIPLLRLVLPSTHISAISEID
RVFFPIN
NT seq
5424 nt
NT seq
+upstream
nt +downstream
nt
atgtctccaggggttcgcccacttaccgtcctcggaaagttcaaacctttcggtctaatc
gctgaagccaccgactcgaatcctccggacgacgataatgttgccggttcctaccagtat
tttctcttcgatcctgatctcacgggtcagcgagacgatgatgatgatggcaatgaagct
agcttctcgcggcagagagagcatgagctcttcatccgagataaccgcataatctggaca
agcggttcacgagtgctcaagcggtttaccttgtcttctcccatcatcaaggcatgctgg
agtcacattggtcgaggagcggaagcttttctttgtgtcttacaaattggttgtttaaca
atatacaacacttcgggcgaagtagtatctgttccgcttccacgcactgtcgtatcaata
tggcctctaccgtttggtatacttcttcagcaagctgctgaaatgtatccaacctcgagt
attccattttcttctgctagccccgctcttggttctcgtgagatgctgcgccaaagaaaa
gaagttgggaatatttcgcctcagaactttcattccacagtcgcgcatggccttactagc
aaaagagacttgtctgcttcccatttgattctaagagatccattagaggaacctgggcca
atctatctagaagagaggggaaagttgaacataatgaaggactacgatgaaagaacaata
tggtcaagtaacctttttcctcttttgacctcgtataacaaaggcaagatgcaacattct
gtgtgggcagtcgaatttatagagtctagccatgaagcttctgcgtcatgttcaagcagc
gctgttcctgatactgttatcccgaaacgagtatcttttcgcagaatatggcaagccaaa
ggtgctaagaaagctgcatctaaggtctttttggcaactgatgatgcagtcccagtaatt
tgctttctgattctagaacaaaagaaactgttatcggtgggactccaaactgttgagatc
aataatgaaattatgtttgacgtcaagcctgacataagctggagtgtctctgcaattgct
gctgcacctgttgttgtgacacgttctcatttgaaaatagggctgcttccacatttggat
atcattgttttatctccagaaaatgacctctttctttattcaggaaaacaatgcctctgt
aggtatgtactaccttcttggttgggggagagtcttgtttctggtgagtctgcaaaaaca
gattcaggttcccaggatctgaagatcacaggattgtctgatgctgtgttaggatgtatc
aatctgtcagtaaatcattcacagatctttcggtgtgccttaactagtaacccttcatct
tcacttgcaaacgattgcatagcagccatggctgagggattaccatccgatttgtacaag
ttgtttctctctcttctttggggatatggttattctgaccagaagggttgcagtattcat
tttgaatgggaagcgttgtgcaacatttttctggggatctgtcaaaaacctactggtgtg
catctgaagcaactcaagacatcatctgagtcctcctgggaatttcttctcagcagcaag
tttcataagacctactctaggttccacagtggtataacttcaatcaatcccctggatcgg
gaagaaattgtcccattttgtactaagactggtagtggagatagaccagacaactcattt
gaattaatggtccagagtttagattgtcttcatgcagtatatgagagtttgaagatggat
aatctacgaaaacaggatttgcatcagctagctgttttattgtgcaatattgccaagttt
ctgggtgagaagtgttacatagatcactacatacgtgattttcctcgtctttccaaaatt
actggggcatgcaaaaccctttcttcgagcagaaaacctccaaatatattcagatggctt
gagaactgtttaagacgtggatgtttatccacaaaccttgatgacctaccagatttgatc
cgtaaagatgggtgctccactgtgaactgggcaaggaaaattgtttccttctacagtgtg
ttatttggtgataagccagtcggaaagaaacttacgtcaggtgtcccctgtaatattgcc
ccaggatcatattccagtaacgaggaacttgctatcttggctatgactggagagagattt
gggcttcaccaactggatttgctaccttccggtgtatctctccctctgagacatgcactt
gatagctgtcgagaatctcctccagctgactggccagcaattgcttatgtgcttcttggt
cgagaagatatggcccaatccgtcttcagaaatttgagctcatctaaggaatttgagatg
cagtcaaatacgagtttaatatccatgtccataccctacatgctgcatttgcatccagta
attgttccatcctctttatctgagtcaattggcttggaaaacgctaagattgaggataca
aattctgtggatggttctgtgatagatggaatggagcatatcttcaattcctatacgcag
ttacggtatggccgagatctacgactgaatgaggttcgacgtcttttgtgctctgcacga
cctgtggtcattcaaacttctgctaaccctactatatctgatcaggagcagcaacaggac
cagctttggcgtatagcacagaggactgctgtacttcccctcgggcgtggagcattcaca
ttatcaacaatacacacgcttttaactgaggcgtttactgtaccaaagcttgttttggct
ggtcggctgcctgctcaacaaaatgccgtggttaatctagatccaaacgtcaggagtatt
caagaacttaagacctggccagagtttcataatgctgttgctgctgggttacgactggca
ccgcttcagggaaaagtgtccagaacgtggattaaatacaataaacctggagagccaaat
gctgttcatgctggacttctgtttgggctgggattacagggatatttgcatgtgttaaac
cttagtgacatataccaatatttcactcaggaccatgagagcaccacggtaggtttgatg
cttggtctggcagcttcgtacaggagaacaatgcaacctgatattgcaaaggctctcttt
ttccatgttcctactcgataccaagcttcatatgctgactttgagataccaacgcttctg
cagtctgcagctttagtctccgtcggcattctatttgaaggatcggcacacctgcagaca
atgcaattacttctgggtgaaattggccgcagaagtgcaggggacaatgtacttgaaagg
gagggttatgctgtatctgcaggattctcacttggtcttgttgctcttggccgtggaggt
gacgcgctaggttctttggactcctttgtcaatcgcttactccagtatctgggagcaaaa
gaggaaagatctctccttgcaccatcaaatgaagatctccgaagcgctgcacaggtgaca
gacggaagcactccaaatgttaatataactgcacctggagcgataatcgccctcgcatta
atgtatcttaagacagactcagaggtcatcttctcgaagctctctattccacaaacacgt
tacgatttggagtgcgtaaggcctgatttcataatgctccgggtcattgctcggaacctg
ataatgtggagcaggatccgtcctaaaagtgattggattctttctcaagtccccgaagta
gtaaaaaacggtgtcagccacctccaagatgacatggatgatatgtatgaagtggacgtt
gaatcccttgtgcaggcatatgtcaatatagtgactggggcatgcatttcacttgggctg
agattttctggtacaagggatggaaatgctcgtgatttacttaacagctatgctctctat
cttttgaatgagatcaagcctgtttctgcgccacctggaaatgcatttcccaagggaata
tctagatatgttgatcggggaacgcttgaaatgtgtctttatcttattgttctttccctt
tcagtggtcatggcgggatctggagacttgcaaatatttcggttgctgagatttctccgc
agccgaaactctgctgatggacatgctaactatggcactcaaatggcggtgagcttagcc
acgggtttcttatttcttggtggtggtatgcgaacattttcaacgagtaatggctcactt
gcaatgttgcttatcactctctatccgcggttgccttctggaccaaatgacaatcgttgt
cacctccaggcattcaggcatttatatgtccttgcaacagaggctcgttggctgcagact
attgatgttgattccggtcttcctgtatatgctcctctagaagtcacagtaaaagagaca
gaactatattctgaaacaagatattccgaggttaccccgtgcattctgccagagcgtgct
attctaaagagaatttgtgtctgtggtcctcgatactggccccaacaagttgagcttgtc
ccagaagagaaacattggtggagctttggggacaagagtgatcccttcaattctggtgtt
atttttgtcaaaaggaaagtaggagcttgttcgtatgttgatgatccagttgggtgtcag
tcactgctttcacgagcaatgcacaaggtttttggtttaagaactctggacgaatctaat
tcgcttgctaatagtcatagagaactggattctgatagcgttgatcacttggtcagcact
ttctcatctgatccaagcctaatagcctttgcacagttgtgttgtgacaaatcttggaat
gacagatctgattctgatttcaaggagttctgtctgcaagtgttgtttgactgtataagc
aaggatagaccagctcttttgcaggtttatttatcgttgtatacaaccattggttcaatg
gctgatcttctcgtcaaaagcgatagtcatatgtgtgattcactttccatctcaagcctc
aaggttgctcttgcctacaacgaggcggtaacaagtggaagattggcctcttcaggtggc
tttgttcaatcaatcttcttagcatcactaggaaaacgatgtgaagagattttgaattgt
tcgacggagctgaagactaatttgagagattatttgacctcagaggcatggcctgatgat
gatcagaaagacgtgatccttctctcatggtacttgaaatggttcagtgtaccgtctcca
tcgatcatcaaagcagtagtggagaagatcaaatccaagtccaagatctcaacttccgca
atacctttgttacggttagtgttacctagtacgcatattagtgcgataagtgagattgat
agggtcttttttcccatcaattga
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