Raphanus sativus (radish): 108841924
Help
Entry
108841924 CDS
T06014
Name
(RefSeq) histone-lysine N-methyltransferase ATXR3
KO
K22748
[histone H3]-lysine4 N-trimethyltransferase ATXR3 [EC:
2.1.1.354
]
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz00310
Lysine degradation
rsz01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
108841924
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
rsz03036
]
108841924
Enzymes [BR:
rsz01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.354 [histone H3]-lysine4 N-trimethyltransferase
108841924
Chromosome and associated proteins [BR:
rsz03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
108841924
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SDG2_C
SET
GYF_2
GYF
F-box-like
Motif
Other DBs
NCBI-GeneID:
108841924
NCBI-ProteinID:
XP_018470209
UniProt:
A0A6J0MDN9
LinkDB
All DBs
Position
2:29262497..29273348
Genome browser
AA seq
2394 aa
AA seq
DB search
MRNGGVATCMPLLNIMDKLPTMEKKTLCGGGNNNDSKVAATSENGHTTDNKLPEFQPAKP
SASQPPKKKKKIVKVIRKVVVRKPKQRKDQGVQLSGESQVQKKEQDKKSEVVQGKGGESS
NKEENGGDSGFKDEVEEGELGTLNPDGVLENGEISPVKSLQRSEVEKGEISGETWKKDET
TKGDYSNLQYNKWNVERRDLPADKYRKEEREFRSWRDPGDEIEKGEFIPDRWHKMDTVKD
DHSYNRSRRNGVDREKYDYDYEHERTPPGGRFANEDTYRRREFRSGNDRATKISSKIVIE
ESLHKNEYNDPNNLGKEYSSTVNKLKRHGAEPDSFERKHFYADHGDYGSSKYRKLSDDSS
RSLHPDHYSRNSVERDYRDSYSSKNSSLEKYPRKHQDSYFPARSVSDRHAHSPARSDLSP
HDRSRYHGHRDRSSLHRERSPYARERSPYTFEKPSHARKKSPHDRSHHHDYRRSPSYSEW
SSDRRDGTSRYMEDPQSDRTRRNGHREISRKSGVRERRDSQAGMELEHKHRHRDSNGKES
TPSRKDLQGKNILYNNNPVVEKDSVCDSSKIPSACAKGKESVQVGEAPTEELPSMEVDMD
ICDTPPHEEPLAADSSLGKWFYLDYYGTEHGPAKLSELKALMEQGILFSDHMIKHSDNNR
WVTIENATSPVVNINTPSIVSDTVTQLVNPPEAPGNLLEDIADAAQAVPMEQGAGDSLPE
SLSIPDSNDIVVGHREDFQFDNRIASLLEGYTITPGRELETLGEAMQIEVELEETRRFVS
SEDIVWCYYQVVNQLLLNEESCGRSEPKTVAIEELKSENVDNSESDETGSWFSGRWSCKG
GDWIRHDEAFQDRDYKTKMVLNDGFPLCLMQKSGYEDPRWHHKDDLYNPCSSSKLELPLW
AFSGADERNQARGVKANVLSVVRLNSLVVSDQVPSVPDPLVKVRSREKFSSRHARPSPAS
CDSKRESVETISQTTACSSQDLQRFWKTDASVSTPGDRLYTVDDLHLHLGDWFYMDGAGQ
EQGPLPFSELQILVDKGLIKRHTSVFRKSDKIWVPVTSITKTSEISAKLQGKTPALPSDC
QSLDVSESQDFRHSEMDTSLSSFHAMHPQFLGYFRGKLHQLIMKTYKTREFSAAINDVLD
SWIHARQPKKETDKYMHQNSEFGSSSYTKRARLMAGESRDHSEVEDAQMFQKDELAFEDL
CGDATFHVEGSGSSGTVGMYWDLLDGHVLARVFHLLRYDVKSLAFASMTCRHWKAVVSSY
KDISRQVDLSSLGTNCTDSRLWSIMNTYNTEKIDSIILVGCTNVTSSMLEEILRLFPHIS
SVDITGCSQFGNLTLKYKKLSWLKCQHPRSGDLHSRLTSLKQTNVNKSKGLGGDTDDFGN
LKDYFDRVEKRDSANQLFRRSLYKRSKLYDARKSSAILSRDARIRRWAIKKSEHGYKRVE
EFLASSLRGIMMQNTFDFFVLKVAQIEEKMKNGYYVSHGLKSVKEDISRMCRQAIKERNR
GDSKDMNRIIILFIQLATCLEEVSMATSSYRRDELMKSWQDGSGLSSASKYNTKLSKSVT
EKKYMSRTGDTFGVNGALDYGEYASDREIKRRLSKLNRKSFGSGSETSSELSDNDNYSSA
SESESDIRSEGRSQDTRVEKYFTADESFDSVTEEREWGARMTKASLVPPVTRKYELIEEY
TIVADEEEVRRKMRVSLPEDYGEKLNAQRNGIEELDMELPEVKEYKPRKLLGNEVLEQEV
YGIDPYTHNLLLDSMPGELDWSLQDKHSFIEDVVLRALNRKVRFLTGSGNTPMVYPLRPV
IEELKENSREECDIQTMRMCQGVLKAIESRSGDTYVSYRKGLGVVCNKQGGFVEDDFVVE
FLGEVYPVWKWFEKQDGIRSLQENKTDPAPEFYNIYLERPKGDADGYDLVVVDAMHKANY
ASRICHSCRPNCEAKVTAVDGHYQIGIYSVRPIEYGEEITFDYNSVTESKEEYEASVCLC
GSHVCRGSYLNLTGEGAFQKVLKEWHGLLDRHRLMLEACMLNSVSEEDYLELGRAGLGSC
LLGGLPDWVIAYSAHLVRFINFERTKLPVEILKHNMEEKIKYFSDIHLDVEKSDAEVQAE
GVYNQRLQNLAVTLDKVRYVMRRVFGDPKNAPPPLEKLTPEETVSFLWNGDGSLVEELLQ
CLSPHVEVGIVDKLRSKIRAHDPSGSADVLKDLQRSLLWLRDEIRDLPCTYKCRNDAAAD
LIHIYAYTKCLFKVREYKSFMSSPVHISPLDLGAKYADKLGEGIKEYRKTYGENYCLGQL
IYWYEQTNTDPDLTLVKATRGCLSLPEVASFYAKAHKPSKHRVYGPKTVKTMVSQMSKQP
QKPWAKDKIWMFKSSLGVLGSPMFDTVLNNSSLDRELVQWLRNRRHVFQATWDS
NT seq
7185 nt
NT seq
+upstream
nt +downstream
nt
atgagaaatgggggtgtcgccacatgcatgcctctactgaatatcatggacaagcttcct
actatggagaagaagacgctttgtggaggagggaacaacaatgattccaaggttgctgct
acttcggagaatggtcacactactgataataagctcccggagtttcagccagctaaaccc
tcagcgtctcagccacctaagaagaagaagaaaattgttaaggttattcgtaaagttgtc
gtcaggaagcccaagcagcggaaagatcagggagtgcaactttctggagaatcacaggtc
cagaagaaagagcaggataagaagagtgaagttgtgcaagggaaaggaggagaaagtagc
aataaagaagaaaacggtggagattctgggtttaaggatgaagtggaagagggtgaatta
ggtacgttaaatcctgatggggttctggagaacggtgagatttctccagtgaagtcattg
cagagaagtgaggtcgaaaaaggagagatttctggggagacttggaagaaagatgaaact
acgaagggggattacagtaacctgcaatataacaaatggaatgtggagaggagggattta
cccgcagataagtacaggaaagaagagagagaattcagatcatggagagatcctggtgat
gaaattgagaaaggggagttcattccagacagatggcataagatggatacagtcaaggat
gatcatagttacaacagatctcgaaggaacggagttgacagagagaaatatgattatgac
tatgaacatgaacgtactccgccaggtgggaggtttgccaatgaggatacttatcgccgg
agagagttcagaagtgggaatgacagggctacaaaaatcagttctaaaattgtaatagag
gaaagtttacataagaacgaatacaacgatcccaataatcttgggaaagagtactcttct
actgtgaacaaactgaagcgacatggagctgaaccggatagttttgagcgcaaacatttt
tatgctgatcatggggactatgggagctccaagtatagaaaactttctgatgattcttcc
cgatctcttcacccagaccactattcacggaactctgttgagagagactacagagattcc
tattcatcaaaaaactcatctctggaaaagtatcctagaaagcatcaagactcatatttc
cctgccaggtctgtttcagacagacatgcacacagccctgcacgatctgatctgtcccca
cacgaccggtctaggtaccatggccacagggatagaagttccctccatcgggagaggtcg
ccatatgcccgggagagatcgccatatacctttgagaagccttcacatgctcgtaaaaag
tctccacatgaccgcagccatcaccatgattatagaagaagtccaagttactctgagtgg
tccagtgatcgcagggatggtacttctagatatatggaagatccccagagcgatcgtacc
aggcgtaatggccatagagaaataagcagaaagagtggagttagggagaggagggattcc
caggctggtatggagctagagcataagcacagacatagggattctaatggaaaagagtcg
accccatcaagaaaagacttgcaaggtaaaaacattttatataacaataacccggtggtt
gagaaagattctgtatgtgattcatccaagattccaagtgcgtgtgcaaagggaaaagag
tctgtgcaagttggtgaagctcctaccgaagagttgccatcaatggaggtagatatggac
atttgtgatacaccacctcatgaggagcctttggcggcagattcatccttggggaagtgg
ttttatcttgattactatggcacggaacatgggcctgcaaagttgtccgagcttaaagct
cttatggagcaaggcattcttttctctgaccatatgattaaacattcagataataatagg
tgggtcactattgaaaatgcaacatctcctgtggtcaacataaatactccatcaatcgtg
tcagataccgtgacgcagctcgtgaatcctcctgaagctcctggtaatttattagaagat
attgcagatgctgcccaagcagttcctatggagcaaggagctggagattccttgcctgaa
tcattgtccataccagatagtaatgatattgtagtaggccatcgcgaagattttcagttt
gataacaggatcgcgagtctcttggagggctatactatcacccctggcagggaacttgaa
acacttggagaagctatgcagattgaagttgagcttgaagagacgagaagatttgtgagt
tccgaagatatcgtctggtgctactatcaagtggtaaatcagttgctattaaatgaggag
tcgtgtggacgttcagagcccaagacagtggcgatcgaagaactgaagtcagaaaatgtt
gataattctgagagcgatgagacaggcagctggttttcaggtcgttggtcttgcaaaggc
ggggactggataagacacgatgaagcttttcaagatagagattacaaaactaaaatggtt
ctgaatgatggtttcccattatgcctgatgcagaagtctgggtatgaggatcctcgctgg
catcacaaggatgatttgtataatccttgcagcagctctaagttggaacttcccttgtgg
gctttttctggtgcagatgagagaaatcaggcgaggggggtaaaggctaatgtgctttct
gtagttaggcttaactcattggtcgttagtgatcaagtaccatcagttcctgatcccctt
gtaaaagttcgtagtagggaaaaattctcttcaaggcatgctcgtccatcccctgcatct
tgtgattccaagagggaatcagtcgaaactatttctcaaacaacagcttgcagtagtcaa
gatttgcagagattttggaaaactgacgcatctgttagcacccctggggatcgtctgtat
acagtcgatgatttgcatttgcatttgggtgattggttctacatggatggggctgggcaa
gaacaaggacctctgccattttcagaactccagatattggttgataaaggtttaataaag
cgtcacactagtgtcttcaggaaatctgacaaaatttgggtacctgttacttctatcact
aaaacttctgaaatcagtgccaagcttcaggggaaaaccccagctctgccttcagattgt
caaagccttgatgtctcagagtcacaggatttcagacattctgaaatggacacaagtcta
agctcgttccatgctatgcatcctcagtttcttggttatttccgtgggaaactccatcaa
ttgattatgaaaacatacaagactcgggaattttctgctgccataaacgatgttttagac
tcttggatccatgcaagacagccaaagaaagagactgacaagtacatgcaccagaattca
gagtttggttcatcatcctatacgaaaagagctcgattgatggctggtgagagtagagac
cattctgaagtggaagatgcacaaatgtttcagaaggatgagttggcatttgaagattta
tgtggggacgctaccttccatgttgaaggaagtggatcttctggcaccgtggggatgtac
tgggatctgttagatggtcacgtgttagcacgggtctttcatttgttgagatatgatgta
aagtcacttgcatttgcgtccatgacttgtagacattggaaggccgttgttagttcatac
aaggatatttcaagacaagttgacttatcgtcgttgggtaccaactgcacagattctagg
ctctggagtatcatgaacacttacaacacggagaagattgattctattattctggttggt
tgtacaaacgtgacttccagcatgcttgaggaaattcttcgtttatttccccacatatct
tctgtagacatcacaggctgctcccagttcggaaatttgactttgaaatataaaaaacta
agttggctcaaatgccagcatcctcgatcaggtgacttgcattccaggttaacgagtttg
aaacagactaatgttaataagtctaagggcttaggaggagataccgatgattttggtaac
cttaaggattactttgatcgagtggaaaagcgagactcagccaatcagttgttccgaaga
agtttatacaaacgctcaaaattgtatgatgcaaggaaatcatcggcaattctatccagg
gatgctcgtatcaggcgatgggcaattaagaagtcagaacacgggtataagagagtggag
gaattccttgcttcaagccttaggggcatcatgatgcagaatacttttgacttctttgtt
ttaaaggttgctcagatagaggaaaaaatgaaaaacggttactacgttagtcatggtttg
aaatctgtgaaggaggatatcagccggatgtgcaggcaagcaattaaagagaggaatcgg
ggagattccaaagacatgaacagaatcatcatactgtttattcaacttgccacatgttta
gaagaggtctctatggccacttcttcatatagaagagatgaattgatgaagtcatggcaa
gatggctcagggttgtcatcagcttcgaagtacaacacgaagttgagcaaatctgttact
gaaaagaagtacatgagcaggactggtgacacatttggtgtaaatggtgcgttggactac
ggagaatatgcatctgaccgcgaaatcaaaaggcgtttgtctaaactgaatcgtaaatca
tttggttcgggaagtgaaacttcgtccgagctatctgataatgacaattacagctcagcc
tcagaaagcgaatctgatatccgttcagaaggtcgatcacaggacacacgtgttgaaaaa
tactttacagcagacgaatcctttgattctgtgaccgaagagcgcgaatggggtgcacgt
atgaccaaagctagtcttgtgccaccagtcacaaggaaatatgaactgattgaagagtac
acgattgtcgctgatgaggaggaggtacgacgaaagatgcgggtttctttgccagaggac
tatggtgagaagctgaatgcacaacgaaatggcattgaagagttagatatggagcttcct
gaagtcaaggagtataaaccaagaaagcttcttggcaacgaggttttagagcaagaggtt
tatggaatcgatccttacacccataacctcttacttgattcaatgcccggagaattggac
tggtcactgcaggataaacattcatttatagaagatgtagtcttacgtgccctgaacagg
aaagttaggtttctcactggatctggaaacacccccatggtataccctttaagacctgtg
attgaagagctcaaagagaattctcgtgaagagtgtgatatacaaacaatgaggatgtgt
caaggcgtcttaaaggctatagaaagtcgttctggtgatacttatgtatcttatcggaag
ggcctcggtgttgtgtgcaacaaacaaggtggttttgtagaagacgattttgttgttgaa
tttctcggagaggtttatcctgtttggaagtggtttgaaaagcaagatggaattcgttcc
ttacaggaaaacaaaactgatcctgcaccagagttttacaatatatatcttgagagacca
aagggtgacgctgatggatatgatttagttgttgttgatgccatgcacaaggctaattat
gcgagtcgaatttgtcactcttgccgacctaactgtgaagctaaggttactgcggtagat
ggacactaccaaattggcatctattcagtacgtcctattgaatatggcgaggagataact
tttgattataattctgtaactgagagtaaggaagaatatgaagcgtctgtttgcttgtgt
ggtagccatgtatgccgaggcagctacttgaatctcactggtgaaggtgcttttcagaag
gtgttgaaggaatggcatggtctactggatcgacatagactgatgctagaagcttgtatg
ctgaattcagtttcagaagaagattatcttgagttgggaagagctggactgggaagttgt
ttgcttggtgggctgccagattgggtgattgcgtattctgctcacctggtgcggttcatc
aatttcgagagaactaagcttccagtggaaattcttaagcataatatggaagaaaagata
aaatatttctcagacatacaccttgatgttgagaaaagtgatgctgaggttcaggctgag
ggcgtctacaaccagaggcttcagaatttggcagtcacgcttgacaaggtaagatatgtt
atgagacgtgtgtttggggatccaaagaacgctcctccgccgctggagaagcttactcct
gaagaaacagtctcctttttatggaacggggatggctccttagttgaggagcttcttcag
tgcctgtcaccacacgtggaagtggggattgttgataaactcagatccaagattcgtgcc
catgatccatctggatctgcagacgtcctcaaggatcttcaaagatcattactttggttg
agagatgagatccgagatctaccttgcacatacaagtgtcgtaatgatgctgcagctgat
ctgattcacatatatgcctatacaaagtgccttttcaaagttcgggaatacaagtcattt
atgtcttctcctgtacacattagccctttagatttgggggcgaaatatgcggacaagtta
ggtgagggtataaaggagtaccggaaaacgtatggcgagaactattgcctcggccagctg
atttactggtatgaacagacgaacactgatccagatcttacgttggtgaaagcaaccaga
ggttgcctctctttacccgaagtagcttccttctacgcaaaggctcataaaccatcgaag
catcgtgtttatggcccaaagacggtgaaaacaatggtttcacagatgtcaaagcaacct
caaaaaccgtgggcaaaggacaaaatatggatgttcaaaagcagcctgggagtgctagga
agcccgatgttcgatactgtactcaacaactcgtcactagatagagaactggtgcagtgg
ctaagaaacagacggcatgtctttcaagcgacatgggatagttag
DBGET
integrated database retrieval system
