Ramlibacter tataouinensis: Rta_13360
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Entry
Rta_13360 CDS
T01544
Name
(GenBank) signal transduction protein : sensor, GAF domain; transcriptional regulator, Fis family-like protein
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
rta
Ramlibacter tataouinensis
Brite
KEGG Orthology (KO) [BR:
rta00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rta03000
]
Rta_13360
Transcription factors [BR:
rta03000
]
Prokaryotic type
Helix-turn-helix
Other families
Rta_13360
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_8
GAF
HTH_29
HTH_22
HTH_7
HTH_23
HTH_28
Xre-like-HTH
HTH_17
HTH_50
HTH_IclR
CBM26
HTH_30
Motif
Other DBs
NCBI-ProteinID:
AEG92423
UniProt:
F5Y3E9
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All DBs
Position
complement(1390345..1391472)
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AA seq
375 aa
AA seq
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MNASQDARAQQRLQQIAQARDAVMAEGRPATEALVDGGWDRSWIARSWRRCLDSGRRPQE
RVSFDLVPAQAARRVEEASQTLLYAARPVMERLCRAIANTRYFAILTDAEGVVIHVDGAI
DRTDRRAQLITRIGVDLSERAVGTTAIGAVLAELQPVWLHRGEHFFEDTSVYSCAGAPLF
GPDGRCVGMLDLTGIETLERPELKHLVAQSARSIENALALSHPHALLLRLNWPGRALGDD
GDGLVCVDADGWVLSVNATARQMVSGVNAGGGARVHCSELFAVPWEVLFDAARQDAPREV
PLWSGLTLQVLAQSPGQLPRLRGPAPDPRLPLKDLETELIRKAVNEARGNVMQAARVLGI
SRATVYRKLGTRPKG
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
atgaacgccagtcaggatgcacgcgcgcagcagcggctgcagcagatcgcgcaggcccgc
gacgccgtcatggccgagggccgcccggcgaccgaggccctggtggacggcgggtgggac
cgcagctggatcgcgcgctcgtggcggcgctgcctggacagcggccggcgaccgcaggag
cgcgtgtccttcgatctggtgccggcccaggccgcgcgccgcgtcgaggaggccagccag
accctgctctacgcggcgcgcccggtcatggagcggctgtgccgcgcgatcgccaacacc
cgctacttcgccatcctcaccgacgccgagggggtcgtcatccacgtggacggcgccatc
gaccgcacggaccggcgggcccaactgatcacccgcatcggcgtggacctgtccgagcgc
gcggtcggcaccaccgccattggcgccgtgctggccgagctgcagccggtgtggctgcac
cggggcgagcatttcttcgaggacaccagcgtctacagctgcgccggcgcgcccctgttc
gggccggatggccgctgcgtgggcatgctggacctgaccggcatcgagacgctggagcgc
cccgaactcaagcacctggtggcccagtcggcgcgcagcatcgagaacgcgctggcgctg
tcgcacccccacgcgctgctgctgcggctgaactggccggggcgcgcgctgggcgacgac
ggcgacggcctggtgtgcgtggacgcggacggctgggtcctgtcggtgaacgccacggcg
cggcagatggtctcgggcgtgaacgcgggcggcggcgcgcgcgtgcactgcagcgagctg
ttcgccgtgccctgggaggtgctgttcgacgcggcccgccaggacgcgccgcgcgaggtg
ccgctgtggtccggcctgacgctgcaggtgctggcccagtcgcccggccagctgccgcgc
ctgcgcggcccggcgccggacccacgcctgccgctgaaggacctggagaccgagctgatc
cgcaaggccgtgaacgaggcccgcggcaacgtgatgcaggccgcgcgcgtgctgggcatc
agccgggcgacggtgtaccgcaagctgggtacccggcccaaggggtga
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