Ramlibacter tataouinensis: Rta_20950
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Entry
Rta_20950 CDS
T01544
Symbol
smc
Name
(GenBank) Candidate chromosome segregation protein
KO
K03529
chromosome segregation protein
Organism
rta
Ramlibacter tataouinensis
Brite
KEGG Orthology (KO) [BR:
rta00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
rta03036
]
Rta_20950 (smc)
Chromosome and associated proteins [BR:
rta03036
]
Prokaryotic type
Chromosome partitioning proteins
Condensin-like complex
Rta_20950 (smc)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
AAA_21
SMC_hinge
AAA_23
AAA_15
ABC_tran
AAA_29
DUF1664
Motif
Other DBs
NCBI-ProteinID:
AEG93189
UniProt:
F5XYL3
LinkDB
All DBs
Position
complement(2212545..2216249)
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AA seq
1234 aa
AA seq
DB search
MPSNSVAANAEAACASSRARAGPAGRSARAAAGTPWGPRYHPRHRGSASPAPVPANDNRF
RPPVRLTSIKLSGFKSFAEPTNFMLPGQLVGVVGPNGCGKSNIMDAVRWVLGESKASELR
GESMQDVIFNGTTTRKPASRSSVELVFDNADHRAGGQWSQFTEIAVKRVLTRDGTSSYYI
NNQPVRRRDVQDVFLGTGLGPRAYAIIGQGTISRIIESKPEELRLFLEEAAGVSKYKERR
RETENRLSDTRENLTRVEDILRELNANLDKLEKQAEVARRYNGLQADATLKQQQLWFLKR
SESEADQGKLKADAEKAVNDLESRVADLRRVESELETVRQAHYAAGDQVNQAQGQLYEAS
AEVGRLEAEIRFVVEGRQRAEQRLVQLKEQTAQWAARRDEASVELEALAGQGVEAEEQAV
LLAAQVEEQAQRLPELEEALRQAQARSAEQRASVAQVQQQIQVLAADQRNIEEQSRQLNQ
RRERLAADRNALAAPDEARLASLQQQLAAAQEAAEAADARLHELQEQVPQLDEERRGRQQ
ALNQHTAKQADLSARMEALKALQEKVRTDDKLKPWLARHGLDGLQALWSRIHVEPGWENA
LEAALRERLSSLEVSRLEMVRTFAADAPPAKLAFYSPPQAAVPEAAAALPRLADLLRLND
AGQKALLADWLHGCYTAASFEDALAARDRLKPGEVIYVRTGHCVTPHSVSFYAQDSERAG
LLARQQEIENLEKQLRAQALITEEARSALVRVEAAYTDASQRLVGVRREASETQSRAHEL
QVETLRLTQLAEQTRARSEQIAGDLAEVDAMLEELQERRVTAEARFEELDMQLADSQERH
AQLDERVLEAERRLTESREQQRSLERRAQEAQFAQRSLEARRGELQRTIETATQQAASVA
AEEQRAHDELSRLTDAAAQAGLQNALQLKSEREAALGAKRSEYDDLTAKLRASDERRLQL
ERELEPLRQRITDLQLKEQAARLGLEQYTQLLADAQADLEAVARSIADGSVRLSGLQGEI
DRLHREIAALGAVNLAALEELTSARERKQFLDAQSADLNEAITTLEDAIKKIDGETRELL
AGTFNTVNEHFGRMFPELFGGGNAKLVMTGEEILDAGVQVMAQPPGKKNQTIHLLSGGEK
ALTAIALVFAIFQLNPAPFCLLDEVDAPLDDANTERYAKLVSAMSKGTQFLFISHNKIAM
EMAEQLIGVTMQEQGVSRIVAVDMESAVSMVEAA
NT seq
3705 nt
NT seq
+upstream
nt +downstream
nt
atgccatcgaactcggtggcggcgaacgccgaggccgcgtgcgccagctcgcgcgcccgc
gcaggcccggcgggtcgaagtgcccgcgccgcggcaggtacgccatgggggccacggtat
catccgcgccaccgcgggtccgcaagcccggcgcctgttcccgcgaacgacaaccgcttc
cgtcctcccgtgcgtctcacctccatcaagctctccgggttcaagtcgttcgccgaaccc
accaacttcatgctgcccggccagctggtgggcgtggtcggccccaatggctgcggcaag
tccaacatcatggacgccgtgcgctgggtgctgggcgagtccaaggccagcgagctgcgc
ggcgagtccatgcaggacgtgatcttcaacggcacgaccacccgcaagccggcctcgcgc
tcctccgtggagctggtcttcgacaacgccgaccaccgcgccggcggccagtggagccag
ttcaccgagatcgccgtcaagcgcgtgctcacccgcgacggcaccagcagctactacatc
aacaaccagccggtgcgccggcgcgacgtgcaggacgtgttcctgggcaccggcctgggg
ccgcgtgcctacgccatcatcggccagggcacgatcagccgcatcatcgaatccaagccc
gaggaactgcgcctgttcctggaggaggctgccggcgtgtccaagtacaaggagcgccgg
cgcgaaaccgagaaccgcctgtccgacacgcgcgagaacctcacgcgggtggaggacatc
ctgcgcgagctcaatgccaacctcgacaagctggaaaagcaggccgaggtcgcgcgcagg
tacaacggcctgcaggccgacgccacgctgaagcagcagcagctgtggttcctgaagcgc
tccgagagcgaggccgaccagggcaagctcaaggccgacgcggaaaaagccgtgaacgac
ctggagtcgcgcgtcgccgacctgcgccgcgtggaaagcgagctggagaccgtgcgccag
gcgcactacgccgccggcgaccaggtcaaccaggcccagggccagctgtacgaggccagc
gccgaggtcggccggctggaggccgagatccgcttcgtggtcgaaggccgccagcgcgcc
gagcagcgcctggtccagctgaaggagcagacggcccagtgggcggcgcggcgcgacgaa
gcttcggtcgagctcgaggccctggccgggcagggcgtggaggccgaggaacaggcggtg
ctgctggccgctcaggtcgaggagcaggcgcagcgcctgcccgagctggaagaggcgctg
cgccaggcccaggcacgctcggccgagcagcgcgccagcgtcgcccaggtgcagcagcag
atccaggtgctggcggccgaccagcgcaacatcgaggagcagtcgcgccagctcaatcag
cggcgcgagcggctggcggcggaccgcaacgcgctggccgcgcccgacgaagcccgcctg
gccagcctgcagcagcagctggccgccgcgcaggaagcggccgaggccgccgacgcccgc
ctgcacgagctgcaggagcaggtgccgcagctggacgaggaacgccgcggccgccagcag
gcgctgaaccagcacacggccaagcaggccgacctgtcggcccgcatggaggcgctcaag
gcgctgcaggagaaggtccggaccgacgacaagctcaagccctggctggcccggcacggc
ctggacggcctgcaggcgctgtggagccgcatccacgtcgagcccggctgggagaacgcg
ctggaggccgcgctgcgcgagcggctgtcctcgctggaggtgtcgcgcctggaaatggtg
cgtaccttcgcggccgatgcgccgccggccaagctggcgttctacagcccgccgcaggcc
gccgtccccgaagcggctgccgcgctgccgcgcctggccgacctgctgcgcctgaacgac
gccggccagaaggcgctgctggccgattggctgcacggctgctacaccgcggccagtttc
gaggacgcgctggccgcccgcgacaggctcaagccgggcgaggtcatctacgtccggacc
ggccattgcgtcacgccgcacagcgtgagcttctatgcccaggattccgagcgggccggc
ctgctggcgcgccagcaggagatcgagaacctggagaagcagctgcgggcccaggcgctg
atcaccgaggaggcgcgctcggccctggtgcgggtggaggccgcgtacaccgacgcgtcc
cagcgcctggtgggcgtgcggcgcgaggcgtctgaaacgcagagccgtgcccacgagctg
caggtcgagaccctgcgcctgacgcaactggccgagcagacccgggcccgcagcgagcag
atcgccggcgacctggccgaggtcgacgcgatgctggaggaactgcaggagcgccgcgtc
acggccgaggcccgcttcgaggaactggacatgcagctggccgacagccaggagcggcat
gcccagctggacgagcgcgtgctcgaggccgagcgccggctgaccgagtcgcgcgagcag
cagcgcagcctggaacgccgggcgcaagaggcgcagttcgcccagcgctcgctggaggcg
cgccgcggcgagctgcagcgcaccatcgagaccgccacgcagcaggccgcgtctgtcgcg
gcggaggagcagcgtgcgcacgacgagctgtcgcgcctgaccgatgccgcggcgcaggcc
ggcctgcagaacgccctgcagctcaagtcggagcgcgaggccgctctgggtgccaagcgc
agcgagtacgacgacctcaccgccaagctgcgcgccagcgacgagcgccggctgcagctg
gagcgcgagctggaaccgctgcgccagcgcatcaccgacctgcagctcaaggagcaggcg
gcgcgcctgggcctggagcagtacacccaactgctggccgacgcgcaggccgacctggaa
gcggtggccaggtccattgcggacggcagtgtgcgcctgtcgggcctgcagggcgagatc
gaccgcctgcaccgcgagatcgcggcgctgggcgcggtgaacctggcggcgctggaggag
ctgacctcggcgcgcgagcgcaagcagttcctggacgcccagtcggccgacctgaacgag
gccatcaccacgctggaggacgcgatcaagaagatcgacggcgagacgcgcgagctgctg
gccggcaccttcaacaccgtgaacgagcacttcggccggatgttcccggagctgttcggc
ggcggcaacgccaagctggtgatgaccggcgaggagatcctggacgccggcgtgcaggtg
atggcccagccgcccggcaagaagaaccagaccatccacctgctgtccggcggcgagaag
gcgctcacggccatcgccctggtgttcgccatcttccagctcaaccccgcgccgttctgc
ctcctggacgaggtggacgcgccgctggacgacgccaacaccgagcgctatgccaagctg
gtttccgccatgtccaagggcacgcagttcctgttcatcagccataacaagatcgccatg
gagatggccgagcagctgatcggcgtgaccatgcaggagcagggcgtctcgcgcatcgtg
gcggtggacatggaatcggccgtgtccatggtcgaggcggcctga
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