Ramlibacter tataouinensis: Rta_27840
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Entry
Rta_27840 CDS
T01544
Name
(GenBank) Candidate virulence factor
KO
K03980
putative peptidoglycan lipid II flippase
Organism
rta
Ramlibacter tataouinensis
Brite
KEGG Orthology (KO) [BR:
rta00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
rta01011
]
Rta_27840
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rta02000
]
Rta_27840
Peptidoglycan biosynthesis and degradation proteins [BR:
rta01011
]
Precursor biosynthesis
Flippase
Rta_27840
Transporters [BR:
rta02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
Rta_27840
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
MurJ
Polysacc_synt_3
Polysacc_synt_C
Motif
Other DBs
NCBI-ProteinID:
AEG93887
UniProt:
F5Y547
LinkDB
All DBs
Position
complement(2964735..2966300)
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AA seq
521 aa
AA seq
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MSLFKAASTVSLLTLASRVTGLVRDLLMAATFGASALTDAFNVAFRIPNLFRRLFGEGAF
SQAFVPALAHARERDGEAMTKRLIDSVATVLAWALLVTCVLGVAGAPLLVWALASGLRQE
PASFEAAVLMTRWMFPYIGFMSLVALAAGILNTWRRFALPAATPVLLNLAMIAAAWLGAP
WFRSLGIEPIYAMAGGVMLGGVLQLGVQVPALRRLGLLPRIGLAWSRLREAWGDPGVRQV
LRMMGPALLGVSVAQLSLLINTQIASYLAPGSVTWLFYADRLMEFPTAMLGVALGVVLMP
QLAAAKAANDPQRYSAMLDWGLRLVVLLAVPSSVALLLFAQPLVATLFHYGRFTDRDVTQ
VSVALAGYGAGLLGLVAIKVLAPGFYASRDMRTPVRIAVVVLVLTQLMNLALVPLLQHAG
LALSIGLGALVNALWLLLGLRRRGSWTPSAGWGRFGLQVLAATALLAVFLMWAAGAFPWV
QLRAEGYKRVGLLALTLLGSFAIYFGALWAAGVKLRQFVTR
NT seq
1566 nt
NT seq
+upstream
nt +downstream
nt
gtgagccttttcaaagccgcttccaccgtctcgctcttgacactggcttcccgcgtcacc
ggcctggtacgcgacctgctgatggcggccaccttcggcgccagcgcgctgaccgacgcc
ttcaacgtcgccttccgcatccccaacctgttccgccggctgttcggcgagggcgccttc
agccaggccttcgtgccggcgctggcgcatgccagggaaagggacggcgaggccatgacc
aagcggctgatcgacagcgtggccaccgtgctggcctgggcgctgctggtcacctgcgtc
ctgggcgtggccggcgcgccgctgctggtctgggccctggccagcggcctgcggcaggag
cccgccagcttcgaagcggcggtgctgatgacccgctggatgttcccctacatcggcttc
atgtcgctggtggcgctggcggcgggcatcctcaacacctggaggcgcttcgccctgccg
gcggccacgccggtgctgctgaacctggcgatgatcgcggcggcctggctgggcgcgccc
tggttccgctcgctgggcatcgagcccatctatgccatggcgggcggtgtcatgctgggg
ggcgtgctgcagctgggggtgcaggtgccggcattgcggcggctggggctgctgccgcgc
atcgggctggcgtggtcccgcctgcgcgaggcctggggcgaccccggcgtgcgccaggtg
ctgcggatgatggggccggccctgctgggcgtcagcgtggcccagctgtcattgctgatc
aacacgcagatcgcctcctacctggcgcccggcagcgtcacttggcttttctacgccgac
cggctgatggagttccccaccgcgatgctgggcgtggcgctgggcgtggtgctcatgccc
cagctggcggcggccaaggcggcgaacgacccgcagcgctactcggccatgctggactgg
ggcttgcggctggtggtgctgctggcggtgcccagctcggtggcgctgctgctgttcgcg
cagcccctggtggccacgctgttccactatgggcgcttcaccgaccgcgacgtgacgcag
gtatccgtcgcgctggccggctacggtgcggggctgctgggcctggtggcgatcaaggtg
ctggcgccgggcttctacgccagccgcgacatgcgcacgccggtgcgcatcgcggtggtc
gtgctggtgctgacgcagctgatgaacctggccctggtgccgctgctgcagcacgccggg
ctggcgctgtccatcggcctgggggcgctggtcaatgccctgtggctgctgctcggcctg
cgccgccgcggcagctggacccccagcgccggctggggccgcttcggcctgcaggtgctg
gcggccacggccctgctggcggtgttcctgatgtgggcggcgggggctttcccgtgggtc
cagctgcgtgccgagggctacaaacgggtcggcctgctggccttgaccttgctgggttct
tttgctatctatttcggagcactctgggcggccggcgtgaagctgcggcagtttgtcacg
cgctga
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