Rissa tridactyla (black-legged kittiwake): 128900925
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Entry
128900925 CDS
T09443
Symbol
GATAD2B
Name
(RefSeq) transcriptional repressor p66-beta
KO
K23194
transcriptional repressor p66
Organism
rtd
Rissa tridactyla (black-legged kittiwake)
Pathway
rtd03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
rtd00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
128900925 (GATAD2B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rtd03000
]
128900925 (GATAD2B)
03036 Chromosome and associated proteins [BR:
rtd03036
]
128900925 (GATAD2B)
Transcription factors [BR:
rtd03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
128900925 (GATAD2B)
Chromosome and associated proteins [BR:
rtd03036
]
Eukaryotic type
Chromatin remodeling factors
NuRD complex
128900925 (GATAD2B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
P66_CC
GATA
FAM76
LIM
DUF4004
DUF4603
Spc29
Motif
Other DBs
NCBI-GeneID:
128900925
NCBI-ProteinID:
XP_054038562
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All DBs
Position
23:1168471..1211419
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AA seq
591 aa
AA seq
DB search
MDRMTEDALRLNLLKRSLDQADDRDDVLAKRLKMEGHEAMERLKMLALLKRKDLSGIEVP
HELPVKQDGVKVYEEKLNGSLRPHGDGRTAGRPGKENINDEPVDMSARRSDQDRGRLTPS
PDIIVLSDNEASSPRSSSRMEERLKAANLEMFKGKSIEERQQLIKQLRDELRLEEARLVL
LKKLRQSQLQKENVVQKTPVVQNAASIVQPSPAHVGQQGLSKLPSRPGAQGVEPQNLRTL
QGHSVIRSATNTTLPHMLMSQRVIAPNPAQLQGQRVPPKPGLIRTTTPSMNPAINYQPQS
SSSVPCQRTSSSAIYMNLASHIQPGTVNRVSSPLPSPSALNDAANSQAAAKLALRKQLEK
TLLEIPPPKPPAPLLHFLPSAANSEFIYMVGLEEVVQSVIDSQGKSCASLLRVEPFVCAQ
CRTDFTPHWKQEKNGKILCEQCMTSNQKKALKAEHTNRLKNAFVKALQQEQEIEQRLQQQ
AALSPTTAPAVSSVSKQENIMRHHTLRQAPQPQSTLQRGIPTSARSMLSNFAQAPQLSVA
GGLLGMPGVNIAYLNAGIGGHKASSLADRQREYLLDMIPPRSISQSISGQK
NT seq
1776 nt
NT seq
+upstream
nt +downstream
nt
atggacagaatgacggaggatgctctgcgcctgaacctcttgaaacggagcttggaccaa
gcagatgaccgggatgatgtcctggcaaagagattgaaaatggaaggacatgaggcgatg
gagcgcctgaagatgctggcactgctgaagaggaaagacctctcgggcatcgaggtgccc
cacgagctgccggtgaagcaggatggtgtgaaagtctatgaagaaaagctgaatgggagc
cttaggccccatggggatggcaggactgcagggaggccagggaaggaaaacattaacgat
gagccggtggatatgagcgcgaggagaagtgaccaggacaggggacgattaaccccttcg
ccggatataattgtcctctctgataatgaagcgtccagtccccgctccagctctcgcatg
gaggaaagacttaaggcagcaaatcttgaaatgtttaagggtaaaagcatagaggagcga
cagcagctgatcaagcagcttcgggatgagctacggctggaggaggccaggcttgtgttg
ctgaagaaactgaggcaaagtcagctgcaaaaggagaatgtggtacagaagactccggtt
gtccagaatgcggcgtctattgtccagccatctcctgctcacgtgggacagcagggactg
tccaagcttccctccaggcctggagctcagggggttgagcctcagaacttaaggacatta
cagggtcacagtgtcattaggtctgccacaaacacgactctgccccatatgcttatgtcg
cagcgtgtgatcgctccgaaccctgcccagttacaagggcagcgggttcctcctaagcct
ggcctcatccgcactacaactccgagcatgaatccagccatcaactaccaaccgcaatca
agttcttctgttccttgccagcgtacgtcgtcttcagccatctatatgaaccttgcctct
cacatccagcctggcaccgtcaacagagtgtcgtctccgctccccagccccagtgctctg
aatgatgccgccaactcccaggcagccgccaagcttgccctccgcaagcagctggaaaag
acgctgctggagatcccaccccccaaaccacccgctcccctcctgcatttcttgcccagc
gcagccaacagcgagttcatctacatggtggggctggaggaggtggtgcagagcgtcatc
gacagtcaagggaaaagctgcgcgtccctcctgcgcgtggagccctttgtctgcgcccag
tgccgcaccgacttcaccccccactggaagcaggagaaaaacgggaagatcctgtgcgag
cagtgcatgacttccaatcagaagaaggcgctgaaggcagagcacaccaaccggctgaag
aacgcctttgtgaaagctttgcagcaggagcaggagatcgagcagaggctacagcagcag
gcggccttgtcccccaccacggccccggccgtctccagcgtcagcaaacaggagaacatc
atgcggcaccacacgctccggcaggctccgcagccccagagcactttgcagcgtggcatc
cccacctctgcccgctccatgctttccaactttgcgcaggcaccccagctctcggtggcg
ggtggtctcctcggcatgccaggtgttaacatcgcttacctgaacgctggcattggaggc
cacaaagcgtcgagtttggcggaccggcagcgggaataccttttggatatgatcccaccc
cgctctatatcgcagtccatcagcggacagaaataa
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