Rissa tridactyla (black-legged kittiwake): 128902238
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Entry
128902238 CDS
T09443
Symbol
RNF38
Name
(RefSeq) E3 ubiquitin-protein ligase RNF38 isoform X1
KO
K19041
E3 ubiquitin-protein ligase RNF38/44 [EC:
2.3.2.27
]
Organism
rtd
Rissa tridactyla (black-legged kittiwake)
Brite
KEGG Orthology (KO) [BR:
rtd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rtd04121
]
128902238 (RNF38)
Enzymes [BR:
rtd01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
128902238 (RNF38)
Ubiquitin system [BR:
rtd04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
128902238 (RNF38)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-rbx1
zf-C3HC4_2
zf-C3HC4
zf-RING_5
zf-C3HC4_3
zf-ANAPC11
zf-RING_UBOX
zf-RING_16
zf-RING-like
Motif
Other DBs
NCBI-GeneID:
128902238
NCBI-ProteinID:
XP_054040784
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All DBs
Position
Z:complement(35622953..35739538)
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AA seq
661 aa
AA seq
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MPVAARSAPRGAQSRACFLAHAHRRDSGAAPRGEESGGQRPQPLRQAGEAGRHGRWVASS
AAPFLPSFSSSSPPPPASSAASSPAAEAAAAASTSPPAACLLPTPPRTRARSRSGFPGLA
MSGGAARLPPPPAICPPPPPLHGPSLPEPGVRSQSRGSPAGHGAPRAAPGARGPPPGSIG
TSFQCHSIHQDHICNDDSDKSEDSPSPKRQRLSHSVFDYTAASPAPSPPMRPWEMTSNRQ
PSLARTNQHHFSGERCNTPARNRRSPPVRRQRARRDRLSRHNSISQDENYHHLSYGQQQA
IEEPRAFHPPNVSPRMLHPAAHPPQQNAVMVDIHDQIHQGTVPVSYTVTTVAPHGIPLCT
GQHIPACSTPQVPGCSVVFSGQHLPVCSVPPPMLQACSVQHLPVPYAAFPPLISSDPFLL
HPPHISTHHPPHLPPPGQFVPFQAQQSRSPLQRIENEVELLGEHLPVGGFTYSPSAHPPT
LPPSAPLQFLTHDPLHQEVSFGVPYPPFMPRRLTGRSRYRSQQPIPPHPYHPSLLPYVLS
MLPVPPAVGPAFSFELDVEDGEVENYEALLNLAERLGEAKPRGLTKADIEQLPSYRFNPN
NHQSEQTLCVVCMCDFESRQLLRVLPCNHEFHAKCVDKWLKANRTCPICRADASEVHRDS
E
NT seq
1986 nt
NT seq
+upstream
nt +downstream
nt
atgccggtggccgcccgctcagcgccccgcggggcgcagtcccgcgcctgtttcctcgcc
cacgcccaccggcgggacagcggcgccgctccgcgcggcgaggagagcggcggccagcgg
ccccaacccctccgccaggccggcgaggcgggccggcacggtagatgggtggcttcttcc
gccgcccccttcctgccttccttctcctcctcctctccgccgccccccgcctcctccgct
gcctcctcccccgctgccgaggccgccgccgccgcctccacctcccccccggctgcctgc
ctcctcccgacgcccccccggacccgcgctcgctcccgctccggcttcccaggactcgcc
atgagcggcggtgccgctcgcttaccgccgccccccgccatctgcccgccgccgccgccc
ctccacgggccgagcctgccggagccaggagtgcgcagccagagccggggtagccccgcc
ggccacggcgcaccccgcgccgccccgggcgccaggggcccgccaccaggtagcattggt
acatcctttcaatgccactcaatccatcaagatcacatttgtaatgatgacagtgacaag
agtgaagacagtcctagtcccaagcggcaacgcctttcccattcagtctttgactataca
gcagcatcaccagccccatcaccaccaatgcgaccatgggagatgacatcaaacaggcag
ccttctttggctcggaccaaccaacaccacttctcaggggaacgatgcaacacacctgca
cgaaacaggaggagtcctcctgttcgacgtcagagagcaaggagagatcgtttgtctagg
cataattccattagccaggatgaaaactatcaccatctctcctatggacagcagcaagca
atagaagagccccgagcctttcacccaccgaatgtatctcctcgtatgttgcacccagct
gctcatccaccacagcagaacgcagtgatggttgacattcatgatcagatccatcagggc
acagttcctgtctcatacacagtgacaacggtggctccgcatgggataccactctgcaca
ggccagcacatcccagcctgcagcacgccgcaggtcccagggtgctcagtggttttcagt
gggcagcatcttccagtttgcagtgtgcctcccccaatgcttcaggcgtgctcagtccag
cacctaccagtaccatatgctgcatttccacccctcatttctagtgacccattccttttg
catcctcctcatatctctactcaccatcctcctcacttgccacctccaggacaatttgtt
cctttccaagcacagcagtcgcggtcgccacttcaaaggatagaaaatgaagtagaactg
cttggagaacatcttcctgtaggaggttttacatactctccctcagcccatccaccaaca
ctgcctccctcagctcctctccaattcttaacccacgatcctttacaccaggaggtgtca
tttggtgtaccttacccaccttttatgcctcgaagactcacaggccgcagcagataccgg
tcacagcagccaataccaccacacccttaccaccccagcctattaccttatgtgctatca
atgcttccagtgccacctgcagttggaccagctttcagctttgagttggatgtggaagat
ggcgaggtagaaaactatgaggcactgctgaatttggcagaacgtctgggagaagccaag
ccacgaggactgacaaaggcggacattgaacagcttccatcctacagattcaatccaaac
aaccaccagtcagaacagacattgtgtgtggtgtgcatgtgtgattttgagtcaaggcag
ctacttagagtcttaccctgtaaccatgaattccatgctaagtgtgttgataaatggctg
aaggcaaatcgtacctgcccaatttgtagagctgatgcttcggaagtgcatcgtgattca
gaatga
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