KEGG   Rissa tridactyla (black-legged kittiwake): 128911294
Entry
128911294         CDS       T09443                                 
Symbol
CDH23
Name
(RefSeq) cadherin-23 isoform X1
  KO
K06813  cadherin 23
Organism
rtd  Rissa tridactyla (black-legged kittiwake)
Brite
KEGG Orthology (KO) [BR:rtd00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   03037 Cilium and associated proteins [BR:rtd03037]
    128911294 (CDH23)
   04515 Cell adhesion molecules [BR:rtd04515]
    128911294 (CDH23)
Cilium and associated proteins [BR:rtd03037]
 Primary cilia and associated proteins
  USH complex and associated proteins
   128911294 (CDH23)
Cell adhesion molecules [BR:rtd04515]
 Cadherins
  Major cadherins
   128911294 (CDH23)
SSDB
Motif
Pfam: Cadherin Cadherin_3
Other DBs
NCBI-GeneID: 128911294
NCBI-ProteinID: XP_054061933
LinkDB
Position
6:36592443..36802829
AA seq 3319 aa
MKRPTAAGSFLLPLLLLELLPLGRGNHLPYFINYFFDTYLLINEDTPVGSSVTQLLARDL
DNDPLVFGVVGEEASRFFAVESVTGVVWLRQPLDRETKSEFTVEFSVSDSQGVIKGTVNI
QVGDVNDNAPQFHNQPYSVRIPENTPVGTPIFIVNATDPDQGAGGSVLYSFQPPSNFFAI
DSGRGIVSVIRELDYEVTQAYQLQVNATDQDKNKPLSTLANLAITITDVQDMDPIFINLP
YSTNIYENSPPGTTVRMITAIDQDKGRPRGIGYTIVSGNTNSIFALDYISGALTLNGPLD
RENPFYSAGFILTVKATELNDDRTPSNATVTTTFNILVIDINDNAPEFNSSEYSVAIPEL
AQVGFALPLFIQVQDKDEGPNSVFEVYLVGNNSNHFIISPTSIQGKADIRVRVAVPLDFE
TIPRYEFSLFANESIPDHVGFARVKISLINENDNRPIFSKALYNISLFENATVGTTVLQV
HATDNDVGTYGKVSYFFSDDPDRFSLDKDTGVILLTARLDFETTQRYTLTVIARDGGGEE
TTGRVRINVLDVNDNIPTFQKEAYLGALRENEPSITQVVRLRASDEDSPPNNQITYSIVQ
ASAFRDYFDIMVSEGYGVISVNHPLDYEQVANGVIYLTVMAKDAGNPPLNSTVPVTIEVF
DENDNPPTFSKPSYIITVMEDIMAGATVLFLNATDMDRSREYGQESIIYSLEGSSHFRIN
ARSGEITTTSLLDREAKSEYILIVRAVDGGVGHHQKTGIAMVNITLLDINDNYPTWKDEP
YFINLVEMTPPNSDVTTVVAVDPDLGENGTVVYSIRPPNKFYSLNSTTGKIRTTGVLLDR
ENPNAQEAQLMRRIVVSVTDCGRPPLRATSSATVFVNLLDLNDNDPTFQNLPFTAEIAEG
LPAGSSVFQVVAIDLDEGPNGQVTYRMQVGMPRMDFLINSTSGLVTSTAVLDRERIAEYY
LRVVASDAGVPSKSSTSTLTVKVLDVNDESPTFFPAIYNVSLPENVARDFKVVRLNCTDA
DVGLNAELSYFITGGNQDGKFSVGFRDGVVRTVVSLDRETVASYTLILEAIDNGPTGNRR
TGTATVYVTVLDVNDNRPIFLQSSYEVSVPEDIPAASSIVQVKATDADEGINGRVWYRIV
KGNEHNHFRINPSSGLVMRGVRHLDREQNSSHVLEVEAYNTEQGPMRSSVRVIVYVEDVN
DEVPVFTQRQYNRLGLRETAGIGTSVAVVRATDRDTGNGGLVNYKILSGAEGKFEIDEST
GLITTIDYLDYETKTSYLMNVSATDQAPPNNQGFCSVYVSLLNELDEAVQFSNSSYEAVI
MENIPLGSEVLRVQARSIDNLNQITYKFDPNTNAQALSLFKINGITGVITVKGQVDREKG
DFYTLTVVADDGGPKIDSTVVTITVLDENDNSPQFDITSDSSVSVAEDSAIGKRVAVVLA
RDPDAGSNGQVTFSLTSGNIGRAFEIRTTNNTYGEVFVARPLDRELLDHYTLRIQASDGG
VPPRRKEHTLRVNVLDVNDNPPIIDSPFGYNVSVSENVGGGTAVAQVRATDQDVGLNSVL
SYYITRGNEDLTFRMDRVTGEIATRPSPPDRERQSFYSLVITVEDEGNPSLSATTTVYVT
ILDENDNAPAFRQQLYEVTLDEGPATLNATLVTVQALDRDEGPNGTVAYAITEGNILDTF
HIDSATGQIRTVKELDYEISHGRYTLIVTATDQCPIVSRRLTSTTTVLVNLNDINDNCPT
FPRPYEGPFDVTEGQPGPRVWTFLAHDGDSGPSGQVEYSIIAGDPLGEFVISPVEGELRV
RKDAELDRENIPFYNLTIAARDRGVPPLSSTILVGIRVLDINDNDPVLLNLPMNLTLSEN
APISSFVTRILARDADQGPNALLTFDITAGNKENAFYINSTSGIIYVNHPLDRERVAEYR
LTITVKDNPENIRNARRDFDLLVISIADENDNRPLFTQSSYQAEVMENSPPGTLVTVLNG
PILALDSDEGSNAMVTYQLLEASLNFFVIDNRTGVISVKRGSMVDREALLDPLLEFTLVA
CDVGGLNSTASLVVTVLDDNDNRPIFQPASITAWLRENSPPGFSILQVTATDADSGLNQQ
LDYRIEGGGQDRFLIDTATGVIRVANISIDREERDAYRLTVVAVDQGTPALSGTATVSLF
IDDINDCRPEFINPIQTVSIPESAPPGTVVAEVTAIDRDLHPRLEYYLLEIVARDDTDAL
VPDQQGVFTVDFRTGAVKIKTPLNRELVATYEVTISVHDNASEVIDRSVSVPNAKLTVNV
LDVNDNTPRFRPFGVTYFTERILEGATQGTTLISISAVDPDKGANGQITYELLNLSPEGY
VCLEDQSAGKVVANRTVDYEEVQWLNFTIRASDNGSPRRSAEIPVYLQIVDINDNNPVFS
QPSYQKAVFEDVPLGTVILRVQATDADSGRFALIQYSLGDGEGKFGINPNTGDIYILSAL
DREKKDHYTLTAVARDNPGDVSSNRRENSVQVLVTVLDINDFRPQFSKSQFSTSVYENEP
AGTSVITMTATDLDEGDNGVVTYSIEGPGAEAFKINKDSGLITSRRRLQSYERFNLTVVA
TDKGHPPLWGTTMLHVDVIDINDNRPVFVRPPNGTILHIKEEIPLGSNVYEVYATDKDEG
LNGAVLYNLLKTGAGNKDWEYFSIDSVSGLIQTAMRLDREKQAVYNLIIVACDQGQPAYE
TMQPLQVALDDIDDNEPIFLRPPRDSPQYQALSVPEHSQPGTVVGNVTGAVDADEGSNAI
VYYFIAAGNQESNFHLSREGKLQVLRDLDREKDPYYSIIVKASSQRNWSPPRGQRAGRAQ
AWDLNGDLTLQEVRIFLDDINDQSPQFTKSEYTAGVATDAKVGSELIRVVAVDADIGNNS
LVLYNILGIRYIKQHSNDSEEVANIFSIGTLDGILRTFDLFTAYNPGYFVVDIMASDLVG
HNDTAIVGIYILRDDQRVKIIINEIPDKVRQFEEEFISLLSNITGAIVNTDDVQFHVDKK
GRVNFAQTELLIHVVNRDTNRILDVERVIQMIDENKEQLRNLFRNYNVLDVQPAITARAP
DDLSALQMAIIVLAVLLFLAAMLFILMNWYYRTVHKRKLKAIVAGSTGNRGFMDIMDMPN
TNKYSFDGANPVWLDPFCRNMELAAQAEHEDDLPENLSEITDLWNSPARTHGTFGREPSA
AKPEDDRYLRAAIQEYDNIAKLGQIMREGPIKLIQKELEEEEEHSPGQGSLRFRHKQPVE
LKGPDGIHVVHGSTGTLLASDLNSLPEDDQKVLGRSLETLTADCGGYSDHNARTESAKST
PLHKMREVIMESPLEITEL
NT seq 9960 nt   +upstreamnt  +downstreamnt
atgaagcgtcccactgctgctggcagctttctgcttcccctcttgctcctggagctgctc
cctttgggtcggggcaatcacctgccatacttcatcaactacttcttcgatacctacctg
ctgatcaacgaggacactcccgtgggctcctcggtgactcagctgctggcccgggacctg
gacaatgacccgttggtcttcggtgtggttggggaggaggccagccggttcttcgcagtg
gagagcgtgaccggcgtcgtctggctcaggcagcccttggacagagagactaagtcagaa
ttcacggttgaattttccgtcagtgacagccaaggggtgatcaaagggacggtgaacatc
caggtcggggatgtgaatgacaatgccccgcagttccacaaccagccctacagcgtccgc
atcccagagaatacaccggtgggcactccgattttcatagtgaacgccacggatccggac
cagggggcaggaggcagcgtgctttactccttccagcccccttccaatttctttgccatc
gacagcggccgtggcatcgtgtcggtgatacgggagctggactatgaagtgactcaggcg
taccagctccaggtcaacgcgacggaccaagataaaaacaagccgctgtctacgttggcc
aacctggcaatcaccattacagacgtgcaggacatggaccccatcttcatcaacctgccc
tacagcaccaacatctatgagaactcgcctccgggtaccactgtgcgcatgataacggcg
atcgaccaggacaagggccgtccccggggcatcggctacaccatcgtctcaggtaacacc
aacagcatctttgcgctggactacatcagtggagccttaaccttgaatgggccactggac
cgggagaaccccttctatagcgctggattcatcctcacggtgaaggcaacagagctgaac
gatgaccgcacaccctccaacgccaccgtcaccaccaccttcaacatcctagtcattgac
atcaatgacaacgcgcccgagttcaacagctcggagtacagcgtggccatcccggagctg
gcccaggtgggctttgcccttcccctcttcatccaggtgcaggacaaagacgagggaccc
aacagtgtttttgaggtttacctggtgggcaacaactccaaccacttcatcatctcaccg
acctccatccaggggaaggcagacatccgtgtccgcgtggcggtgccgctggactttgag
accattcctcgctacgaattttcgctctttgcaaacgagagcatcccggaccacgtcggc
tttgcacgcgtgaagatcagcctcatcaacgagaatgacaaccgccccatcttcagcaag
gccctgtacaatatcagcctctttgagaatgcaaccgtgggcaccaccgtcctccaggtc
cacgcaactgacaatgacgtgggcacatacggcaaagtcagttattttttcagcgatgac
cctgaccgtttctcgttggacaaagacacgggtgtaatcctcctgacggctcggctggac
tttgagaccacgcagcgctacaccctgaccgtcattgcccgggacggaggcggggaggag
acgacgggacgcgtccggatcaacgtcctcgacgtcaacgacaacatccccaccttccag
aaggaggcatacctgggggccctgcgggagaacgagccctccatcacccaggtggtccgg
ctccgggcgtctgacgaggactcccctccaaacaaccagatcacgtacagcatcgtgcag
gcgtccgccttccgtgactactttgacatcatggtgtcggaagggtacggagtgatcagt
gtgaaccaccccctcgactacgagcaggtggccaacggggttatttacctgactgtgatg
gccaaggatgccggcaacccgccgctcaacagcaccgtccccgtcaccatcgaggtgttt
gatgaaaacgacaacccccccacgttcagcaagccctcctacattataaccgtcatggag
gacatcatggcaggagccacagtgctgtttctcaatgccacggacatggaccggtccagg
gagtacgggcaagagtcgatcatctactccctggagggctcctcgcattttcggatcaat
gctcgctcaggagaaatcacaacaacatctttgctggaccgggaggccaaatccgaatac
atcctcattgtccgggcggtggatggaggcgtgggccaccatcagaagacaggcattgct
atggtgaacatcacgctgctggacatcaatgacaactatcccacctggaaggatgagcca
tacttcatcaacctggtggaaatgaccccccccaactcggacgtcaccacggtggtggcc
gtcgacccggacctgggggagaacgggacagtggtgtacagcatccgaccccccaacaag
ttctacagcctcaacagcaccacgggcaagatccgcaccaccggcgtgctgctggaccgg
gagaaccccaacgcccaggaggcccagctcatgcggaggatcgtggtgtcagtcactgac
tgcgggaggccgcccctgcgagctaccagcagcgccacggttttcgtcaacctgctggac
ctgaacgacaacgaccccactttccaaaatctgcccttcaccgccgagatcgccgagggc
cttcccgcgggctcctccgtcttccaggttgtggccatcgacctggacgagggtccaaat
gggcaggtgacgtaccgcatgcaggtggggatgccccgcatggatttcctcatcaacagc
accagcgggctcgtcacctccactgctgtgctggacagggagaggatcgctgagtactac
ctgcgggtggtggccagcgatgccggtgtgccctccaagagctccactagcaccttgact
gtcaaagttctggacgtgaacgacgagagccccaccttcttcccagccatatacaatgtg
tcactgcccgaaaatgtggcccgggatttcaaagtggtccggctcaactgcacggatgct
gatgttgggctgaacgctgagctcagctacttcatcacgggtgggaaccaggatggcaaa
ttcagcgtcggcttcagggatggggtggtcaggacggtggtgagtctggacagggagaca
gtggcgtcgtacacactgatcctggaggccatcgacaatggccccacggggaaccggcgc
accgggactgccactgtgtacgtgaccgtcctggacgtcaacgacaaccgacccatcttc
cttcagagcagctatgaagtcagcgtccccgaggacatcccggccgccagcagcatagtg
caggtgaaagccacagatgcggatgaaggcataaacggcagagtgtggtacaggattgtc
aagggaaacgagcacaaccacttccgcatcaatcccagcagcgggctggtgatgcgcggc
gtgcggcacctggacagggagcaaaactcctctcacgtcctggaggtggaggcctacaac
acggagcagggacctatgaggagctcggtgcgggtgatcgtctacgtggaagacgtcaat
gatgaggtgccggtgttcacccagcggcagtacaaccgcctggggctgcgggagacggcg
gggatagggacttcggtggcagtggtccgggccaccgaccgagacacagggaacggcgga
ctggtgaactacaaaatcctgtcaggcgccgaagggaagtttgagattgatgaaagcaca
ggcctcatcacgacgatagattacttggactacgagaccaaaaccagctacctgatgaac
gtctctgccacggaccaggcacctcccaacaaccagggcttctgcagtgtctacgtcagc
ctactgaatgagctggatgaggccgtgcaattctccaatagcagctacgaggccgtgatc
atggagaacatccccttgggctctgaggtgctccgggtccaggcccgctccatcgacaac
ctcaaccagatcacctacaagtttgaccccaacaccaatgcccaggcactctccctcttt
aagatcaacgggatcactggtgtgataacagtcaaaggccaggtggatcgagagaaaggg
gatttctataccttgacagtggtggccgatgatggaggaccaaagatcgactccacggtg
gtgaccatcacagtcctggacgagaacgacaacagcccccagttcgacatcacctccgac
tcctccgtcagcgtggcggaggacagtgccatcggcaagcgggtggccgtggtcctggcc
cgcgacccggacgcgggcagcaacgggcaggtgactttctcgctgacgtcggggaacatc
ggcagggctttcgagatccgtaccaccaacaacacctacggcgaggtgtttgtggcacgg
ccactggaccgggagctgctggatcactacaccttacggatccaagcctcggatggcggc
gtgcctccccgcaggaaggagcacactctgcgagtgaacgtcctcgacgtcaatgacaac
ccccccatcatcgacagccccttcggctacaatgtgagcgtgagtgagaacgtcggcggg
ggcacggcggtggcccaggtacgtgccaccgaccaggacgttggcctcaacagcgtcctc
tcctactacatcacccgtgggaacgaggacctgaccttccgcatggaccgcgtcaccggc
gagatcgccacccggccctccccgcccgaccgcgagcggcagagcttctacagcctggtg
atcaccgttgaggacgagggcaacccttccctgtcggccaccacgacagtgtacgtcacc
atcctggacgagaacgacaacgctcctgctttccgacagcagctgtacgaggtgaccctc
gatgaaggtcctgccacactcaacgccaccctcgtcactgtgcaggccctggaccgggat
gagggacccaatggcacggttgcatatgccatcaccgaaggcaacatcttggataccttc
cacatcgacagtgccacgggacagatccgcacggtgaaggagctggactacgagatcagc
catgggcgctacaccttgatcgtcactgccactgaccagtgccccatcgtctcgcgccgg
ctgacatcgaccaccacggtgctggtgaacctcaacgatatcaatgacaactgccccacc
ttcccacggccctacgagggtcccttcgatgtcacagaagggcagcctggcccgcgtgtc
tggaccttcctggcccacgatggtgactcgggacccagtgggcaagtggagtacagcatc
atcgctggggacccccttggggaatttgtgatctccccggtggaaggggagctgcgggtg
cggaaggatgccgagctggaccgcgagaacatccccttctataacctcaccatcgccgcc
cgggaccggggggtgccccccctcagctccacgatcctagtgggcatccgcgtgctggac
atcaacgacaatgaccccgtgctcctcaacctccccatgaacctcaccctcagcgagaat
gcccccatctccagcttcgtcacccgcatccttgcccgggacgcagatcaggggccgaac
gcactcctgaccttcgacataactgcgggcaacaaggagaatgccttctacatcaacagc
accagcggcatcatctacgtaaaccacccgctggacagggagcgggtggcagagtacagg
ctgaccatcacagtgaaggacaaccccgagaacatacgcaatgccaggcgggatttcgac
ctgctggtcatttccatagcggatgagaatgacaaccgccccctcttcacccagagctcc
taccaggctgaggtgatggagaactcgcccccagggaccctggtcacggtgctcaatgga
cccatcctagctctggacagtgatgagggcagcaacgccatggtgacctaccagctcctg
gaggcatctctgaacttctttgttatcgacaacaggacaggtgtcatttcagtgaaacgt
ggcagcatggtagaccgagaggctttgctggaccctctgctggagttcacgctggtggct
tgtgatgtgggagggctgaacagcactgccagcctagtggtgaccgtcctggatgacaat
gacaaccgccccatcttccagccagcttccatcacggcatggctgcgggaaaacagcccc
ccaggcttctccatcctccaggtgacagccacagatgctgacagtggcctcaaccagcag
ctggattaccggattgagggtggcggccaggacaggttcctgatcgacaccgccacgggg
gtgatccgggtggccaacatcagcatcgaccgggaggagcgggatgcctaccggctgaca
gtggtggccgtggaccagggcacgccagcgctctcgggcaccgccaccgtcagcctcttc
atcgacgacatcaacgactgcaggcccgagttcatcaaccccatccagacggtcagcatc
cctgagtcggccccccccggcaccgtggtggctgaggtgactgccatcgaccgggacctc
caccctcgcctggagtactacctgctggagatcgtggcccgtgacgacacagacgcactg
gtgcccgaccagcaaggagtgttcacagtggattttaggacaggagctgtgaagatcaaa
actcccctcaaccgggaactggtggccacctacgaggtcaccatctccgtccacgataat
gccagcgaagtcatcgaccgctccgtcagcgtgcccaacgccaagctgacagtcaatgtc
ttggacgtcaatgacaacaccccccgcttccgcccctttggggtcacctacttcacggag
aggatcctggagggagccacacagggcaccacactcatctccatctcagcggtggacccg
gacaaaggtgccaatgggcagatcacctacgagctgctgaacctctccccggaaggctac
gtctgtcttgaagaccagtcagcagggaaggtcgtggccaacaggacggtggactatgag
gaggtgcagtggctgaacttcaccatccgagcttccgacaacggctctccccgcagatcc
gctgagatccctgtgtacctccagatagtggacatcaatgacaacaatcctgttttcagc
caaccatcctaccagaaagctgtctttgaggacgtgccattgggtacggtcatcctgagg
gtccaggccacggatgcagattctgggcgttttgctctcatccagtacagcctgggggat
ggagagggcaagtttgggataaatcccaacacgggtgacatctacatcctgtcagccctg
gaccgggagaagaaggatcactacacgctgacagctgtagccagggacaaccccggggac
gtgtccagtaaccgtcgggagaactccgtgcaggtgctggtcacagtcctggacattaac
gacttcaggccccagttcagcaagagccagttcagcaccagcgtctacgagaacgagccg
gcggggacgtcggtgatcaccatgaccgccaccgacctggatgaaggggataacggcgta
gtgacctacagcatcgagggccccggcgcagaggctttcaagatcaataaagactcgggg
ctcatcacatcccggcggcgcttgcagtcctacgagaggttcaacctgactgtggtggcc
acagacaaggggcacccgcctctctgggggaccaccatgctccacgtggacgtcatcgac
atcaatgacaaccgccccgtcttcgtccgcccgcccaatggcaccatcctgcacatcaag
gaggagatccccctggggtccaacgtctatgaggtctacgccacggacaaagacgagggc
ctcaacggagcagtgctctacaacctgctgaaaaccggggcggggaacaaagactgggag
tatttcagcatcgactcagtcagcgggctgatccagacggccatgcggctggaccgggag
aagcaggcggtgtacaatctgatcatcgtggcctgtgaccagggccagccagcctatgag
accatgcagcctctccaggtcgcactcgatgacattgatgacaatgagcccatcttcctc
aggccacccagggacagtccccagtaccaggcactttccgtccctgagcactcacagcca
ggcaccgtggtgggaaatgtcactggggcagtggatgcagatgagggctccaacgccatc
gtctactacttcatagcagctgggaaccaggagagcaacttccatctgagccgggagggg
aagctgcaggtcttgcgagacctggaccgggagaaggacccatactactccatcatagtc
aaagcgtccagccagaggaactggtcccctccccggggccagcgggcgggcagagcccag
gcctgggacctcaacggggacctgacccttcaggaggtgcggatcttcctggatgacatc
aatgaccagtccccccagttcaccaagtcagagtacacagcaggggtcgccaccgacgcc
aaggtgggatcggagctgatcagagtggtcgcagtggacgctgatataggcaataacagc
ctggtcctgtacaacatcttgggtatccgctatatcaagcagcactccaacgactccgag
gaggtggccaacatcttcagcattggaacccttgatggaatcctgcgaacctttgacctc
ttcacggcctacaaccccggctacttcgtggtggacatcatggcctctgatctggtgggc
cacaacgacacggccattgtggggatttacatcctgcgggatgaccagcgggtcaaaatc
atcatcaatgagatccctgacaaagttaggcagttcgaagaggagttcatcagtctgctc
tccaacatcacaggcgccattgtcaacacagatgatgtgcagttccatgttgacaagaaa
ggtcgggtgaactttgcacagacagagcttctgatccacgtggtgaacagggataccaac
cgcatcctggacgtggagcgggtgattcagatgatagatgagaacaaggagcagctgagg
aacctcttcaggaactacaatgtgctggatgtgcagcccgccatcaccgcccgggcccca
gatgacctctcggctctgcagatggcgatcatcgtgctggccgtcctgctcttcctggct
gccatgctcttcatcctcatgaactggtactaccggacagtgcacaagaggaaattgaaa
gccatagtggctggctccaccgggaacagaggcttcatggacatcatggacatgccaaac
accaacaagtactcctttgatggggccaaccctgtgtggctggaccccttctgcaggaac
atggagctggcggcacaggcggagcatgaggacgacctgccggagaacctgagtgagatc
accgacctctggaacagcccggcccgcactcacgggaccttcggcagagagccctccgcg
gccaagcccgaggatgaccgctacctgcgggcagccatccaggagtacgacaacattgcc
aagcttgggcagatcatgcgggagggacccatcaagctgatccagaaggagctggaggag
gaggaggagcacagccccggccagggcagcctccgcttccgacacaagcagccggtggag
ctgaaaggtcctgacggcatccacgtggtgcacggcagcacgggcacgctgctcgcctcc
gacctcaacagcctgcccgaggacgaccagaaggtgctgggtcgctcgctggagactctg
accgccgactgcgggggctacagcgaccacaacgcccgcaccgagtcggccaagtccacc
cccttgcacaagatgcgggaggtgatcatggagagcccgctggagatcaccgagttatga

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