Rissa tridactyla (black-legged kittiwake): 128918110
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Entry
128918110 CDS
T09443
Symbol
ITGB4
Name
(RefSeq) integrin beta-4 isoform X1
KO
K06525
integrin beta 4
Organism
rtd
Rissa tridactyla (black-legged kittiwake)
Pathway
rtd04510
Focal adhesion
rtd04512
ECM-receptor interaction
rtd04810
Regulation of actin cytoskeleton
rtd04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
rtd00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
128918110 (ITGB4)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
128918110 (ITGB4)
09142 Cell motility
04820 Cytoskeleton in muscle cells
128918110 (ITGB4)
04810 Regulation of actin cytoskeleton
128918110 (ITGB4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rtd04147
]
128918110 (ITGB4)
04515 Cell adhesion molecules [BR:
rtd04515
]
128918110 (ITGB4)
04090 CD molecules [BR:
rtd04090
]
128918110 (ITGB4)
Exosome [BR:
rtd04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
128918110 (ITGB4)
Exosomal proteins of bladder cancer cells
128918110 (ITGB4)
Cell adhesion molecules [BR:
rtd04515
]
Integrins
Integrin beta subunits
128918110 (ITGB4)
CD molecules [BR:
rtd04090
]
Proteins
128918110 (ITGB4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_beta
fn3
Calx-beta
Pur_ac_phosph_N
I-EGF_1
PSI_integrin
EGF_2
SEA
Motif
Other DBs
NCBI-GeneID:
128918110
NCBI-ProteinID:
XP_054077965
LinkDB
All DBs
Position
15:complement(7690543..7722797)
Genome browser
AA seq
1802 aa
AA seq
DB search
MCFRRMRMDVLPRACAALLLLSLLCATGLCQRSKDNRCVLSRAKSCTECLRVDKDCSFCT
DESFEEPRCNLRENLLRSGCGETSIVYTRGKMETQQNFSINTSLQRTQVSPQGMFMQLRA
GEEMSFNMDVFQPLESPVDLYILMDFSYSMSDDLDNLKSMGEKLAEFLQALTSNYTIGFG
KFVDKVSSPQTDMRPEKLREPWNNADSPFSFKNVIRLTSNIDSFSKELRKERISGNLDAP
EGGFDAILQTAVCKDKIGWRKDSTHLLVFSTESAFHYEADGTNVLAGILARNDEQCHLDD
NGTYAYDTKQDYPSVPTLVRLLGQHNIIPIFAVTNHSYSYYEKLHKYFPISEIGVLQEDS
SNIVELLRTAFERIRSKMDIRADFVPKAMKTEFTSLMYEKTESGSFHITRGEVGKFNVRV
KALEYIGGQHVCSLPEKDRQGVIHVKPTSLSDSLKVTASVICDVCPCEQQKQVNSPKCSF
HGDFACGQCICHPGWRGDTCDCSPASSPNNEACIRPGDVEPCSGRGECLCGKCQCYSEDL
TQRFDGPFCQYDVLQCPRTSGFLCNDRGRCSKGACVCQSGWEGPGCECPTSNDTCIDSRG
GICNNHGRCECGRCICDKASLYTSSTCEISYSLGFQAVCESIRDCVRCQAWGTGNMKGNC
SKCHLQIQMVEELKKEEASEYCSFQDEEDDCTYHYTLEGDPTILPNTTVHVQKKKECPPG
SFLWLIPLLIFLILLLGLLLLLCWKFCACCKACLALLPCCARGRTVGFKEDHYMLRHSLM
SSDHLDTPMVRSGSLKGRDTIRWKINNNVHKQGLTSLAAANPKDLIPYGLSLRLTRLFTQ
NLVKPDTRECEQLRKEVDENLNEVFKRIPGCHKVQQTKFRLQPNSGKRQDHTIVDTVLTA
PRSAKPEIIKVVEKHVSHETFNDLKVSPGYYTVTSDQDAHGMVEFQESVELVDVRVPLFI
REDDDDEKQLQVEAIDVPTGIAEIGRRLVNITIIKEQASSLITFLQPAYSHSRFDKLAKI
PVLREIIENGKSQVTYRTRDLTAKNGRDYTFTEGDLVFQPGETRKEVQVPLLELTEIDTL
LHNCQLKQFAIDLLHPKHGAKIGRYPQTTVTIADPEVVDGVPLMTGLGQVSQSPKGRLSA
PLNPNADALSSREIRFNWFPPPGKPLGYKVKYWIQGDPESEARLIDVKALSAELSNLYPF
CDYEMQVCAYNAMGEGAYSDIIHCRTLEEVPSEPGRLAFNVVSSTVTQLSWAEPAETNGE
ITAYEVSYGLVNEDNVPIGPMKKVLVEDPKKRMVLIENLRESQPYRYMVKARNGAGWGPE
REATINLATQPKRPMSIPIIPDVPIIDAEGGEDYDSYLMYSADVLRSPAGSKHPSVSDDS
EHLLNGRVDFSFPGSGSGTLTRTTNTSYHQLSSHMQQEHRVMGSSSLTRDYSTMLMGHDY
PGRFLPPIHEDAGRTIPRPRDVGFRSRAKVKGYYPSTGFRDSIIMTDGSAGICKYIDSRL
PLGVPDTPTRLVFSALGPTSLKVSWQEPHCEKEVQGYSVQYQLLNGGEVHRLTIPNPCQN
SVVVEDLLPNHSYIFKVKAQSEEGWGPEREGVITIESQVDPQSPLSPVPGSPFTLSTPSA
PGPLVFTALSPDSLQLSWERPRKPNGSILGYMVTCEMLHGGGEPRNIYVEGDNPETTLTV
PHLSENVPYKFKVQAKTTQGFGPEREGIITIESQDGGTFSQFGGQQYMREEVYNFPTEYT
TKTSISHSSLDPHFTDGMLMTTQRVESASSTLTKQVTKEFVSRTVMSSGTLSKQMERQFY
EA
NT seq
5409 nt
NT seq
+upstream
nt +downstream
nt
atgtgtttcaggaggatgaggatggatgtgctgccacgggcatgtgccgcgctgctcctc
ctgtccctgctctgtgccaccggcctctgccaaaggagcaaagataaccgttgtgtgctg
tcccgggcaaagagctgcaccgagtgcctccgagtagacaaggactgctccttctgcact
gatgagagctttgaagagcctcgttgcaacttgcgggagaacttgctgcggtccggctgc
ggggagaccagcattgtctacaccaggggcaagatggagacccagcagaatttcagtatc
aacacgtccctgcagaggacacaggtgtccccccagggcatgttcatgcagctgcgagct
ggggaggagatgagcttcaacatggatgtcttccagcccttggagagccctgtggatctc
tacatcctcatggacttctcctattctatgtctgacgatctggacaacctcaaaagcatg
ggcgaaaaactagcggagttcctgcaagccctgacctccaattacaccatcggattcggc
aagtttgtggacaaagtctcatcccctcagacagacatgagacctgagaagctgcgcgaa
ccctggaacaatgccgactcccccttctccttcaagaacgtcatccgcctcaccagcaac
atcgacagcttcagcaaggagctcaggaaagagcgcatctctggcaacctggatgcccct
gagggtggctttgatgccatcctgcagacagctgtttgcaaggataagatcggctggagg
aaggacagcactcacctgctcgtgttctccactgaatccgcctttcactatgaagctgac
ggtaccaacgtcctggcagggatcctggcgcgaaatgatgagcagtgtcacctcgacgac
aacggcacctacgcgtatgacaccaagcaggactatccttcggtgcccaccctggtgcgc
ctgctgggccaacacaacatcatccccatctttgctgtcaccaaccactcctacagttac
tatgagaagcttcacaagtatttccccatctctgagatcggggtgctccaggaggactct
tccaacatcgtggagctgctccgcacagcctttgagcgcatccgctccaagatggacatc
cgagctgatttcgtccccaaagccatgaagacagagttcacctccttgatgtatgaaaag
acagaatctggctccttccacatcacccgtggagaagtgggcaagttcaacgtgcgtgtg
aaagcacttgagtacatcggcgggcagcacgtctgcagcctccctgagaaagaccggcag
ggagttatccacgtgaaacccacgtccctgagtgacagcctcaaagtcacagcctctgtc
atctgtgacgtgtgtccttgtgaacagcaaaaacaggttaactcacccaagtgcagcttc
catggggactttgcctgcggacagtgcatctgccacccaggctggcgaggggacacgtgc
gactgctccccagcgtcatcccccaacaacgaagcctgcatccgccccggggatgtggag
ccgtgctcgggccggggggagtgcctgtgtgggaagtgccagtgctactccgaggacctg
acgcagcgctttgatgggccgttctgccagtacgacgtcctgcagtgcccgcgtacctcc
ggcttcctctgcaatgatcgcggccgctgctccaagggcgcctgcgtgtgccagagtggc
tgggagggtccgggctgtgaatgtcccacaagcaacgacacctgcatcgacagccgaggg
ggcatttgcaataaccatgggaggtgcgaatgcggcagatgcatctgtgacaaggcttcg
ctgtacaccagctccacctgcgaaatcagctactccctgggcttccaggcggtgtgtgag
agcatccgggactgcgttcgctgccaggcctggggaaccggcaacatgaaagggaactgc
agcaagtgccacctccagatccagatggtggaagagctgaagaaagaggaggccagcgag
tactgctcattccaggatgaggaggacgattgcacgtaccactacaccctggagggagac
cccaccatcctccccaacaccaccgtccacgtgcagaagaaaaaagagtgcccgccgggg
agcttcctctggctcatccctctgctcatcttcctcatcctgctcctggggctgctgctg
ctgctctgctggaagttctgcgcctgctgcaaggcttgcctggccctgcttccctgctgc
gcacgaggtcgcaccgttggcttcaaggaggaccactacatgcttcgccacagcctcatg
tcctccgaccacctggacacccctatggtccgcagtgggtccctcaaaggtcgggacacc
atccgctggaagatcaacaacaacgttcacaagcagggcttaacctccctcgctgccgcc
aaccccaaagatctcattccctatgggctgtctctgaggctgacacggcttttcacgcag
aacctggtgaagccggacacccgggagtgtgagcagctgcgcaaggaagtcgatgagaat
ctgaacgaggttttcaagcgcatccccggctgccacaaggttcagcagaccaagttcagg
ttacagcccaattctgggaaaaggcaggaccacaccattgtggacacggtgctcaccgcc
cctcgctcagccaagccagagatcatcaaagtggtggaaaagcacgtttcccacgagact
ttcaatgacctgaaggtttcaccgggttattacaccgtgacctcagaccaagatgctcat
gggatggtggagtttcaagagtctgtggagctggtggatgtccgtgtcccacttttcatc
agggaggatgatgacgatgagaagcagctgcaggtggaggccattgatgtccccactggc
atcgcagagattggacgccggcttgtcaacatcaccatcatcaaagaacaagccagcagc
ctcatcaccttcttgcagccagcctattcccacagccgctttgataagctggccaagatc
cctgtcctccgggagatcatagaaaacgggaaatcccaagttacctacaggacccgggat
ctcaccgccaagaatggcagggactacaccttcacagagggtgacctggtcttccagccc
ggagagacccgaaaggaggtgcaggtccccttgctggagctgaccgaaatagataccctc
ttacacaactgccagctcaagcagttcgccatcgacctcctccatcccaagcacggcgcc
aagatcgggcgatacccccagaccacggtgaccatcgcggacccagaggtggtggatggt
gtccccttgatgactggcctgggacaggtctcgcagtcccccaaaggccgcctgagtgca
ccgcttaatcccaacgctgacgctctcagctccagggaaatccgcttcaactggtttcct
ccaccgggaaaacctctggggtacaaggtgaaatactggatccaaggagaccccgagtca
gaagcccgtctcatcgatgtcaaagccctatcagcagagctgagtaacctctaccccttc
tgtgactacgagatgcaagtctgcgcctacaatgccatgggtgaaggggcttactccgac
atcatccactgccgcacacttgaggaggtccccagcgagccaggacgcttggctttcaat
gtcgtgtcttccaccgtgacgcagctgagctgggctgagcctgcagaaaccaatggggag
atcacggcttatgaagtcagttatggactcgtcaacgaggacaacgtacccattggccca
atgaagaaggtgctggttgaagacccaaagaagcgcatggtgctgatagaaaacctgcgg
gagtcccagccctatcgctacatggtgaaggccagaaatggtgctggctggggacctgag
agagaagccaccatcaaccttgctacgcagcccaagcgcccgatgtccatccccatcatc
cctgacgtccccatcattgatgcagagggaggtgaggactacgacagctacctgatgtac
agtgcagatgtgcttcgctctccagctggcagcaagcatcccagtgtctctgacgattca
gagcacttgctgaatggccgagtggacttctccttccctggcagtggcagtggcacactg
acgaggacaacaaacaccagctaccaccaactgagctcacacatgcagcaggagcacagg
gtgatggggagctcctcactgacaagagactactccacgatgctaatggggcacgattac
ccggggagattcctccctcccatccatgaagatgctgggaggacaatcccacggccccgg
gatgtgggtttcaggagcagggcaaaggtgaagggttactaccccagcactggctttcgg
gactctataatcatgactgatgggtccgcggggatttgcaagtacatagactccaggctg
ccactgggcgtccccgacacccccacacgcctggtgttctctgccctgggacccacctcc
ctgaaggtgagctggcaggagccgcactgcgagaaggaggtgcagggctacagcgtgcag
taccagctcctcaatggaggagaggtgcaccgactcaccattcccaacccctgccagaac
tcggtggtggtggaggacctgctgcccaaccactcctacatcttcaaggtgaaggcacag
agcgaggaaggctggggccctgagagggaaggagtcatcaccatagagtctcaggtggac
ccgcaaagcccactcagccctgtaccaggttcacccttcacgctgagcacacccagtgct
cccggaccactggttttcactgccctcagccctgactccctgcagctcagctgggaaaga
ccccgcaagcccaatgggtccatcttgggctacatggtcacctgtgagatgctgcatgga
ggaggggagcccaggaatatctatgttgaaggagacaatccagaaactacccttactgtg
ccccacctgagtgagaacgtcccatacaagttcaaagtgcaagccaagaccacccaaggc
tttgggccagagagagaaggcatcatcaccatcgaatctcaggatggaggcactttctcc
cagtttggagggcagcagtacatgagagaagaagtgtataacttccccaccgaatacact
accaaaaccagcatcagccattcctccctggatccccacttcacagacggcatgctgatg
acgacccagcgagtggagagcgccagcagcaccctcaccaaacaggtcaccaaagagttc
gtgagccggacagtgatgtccagcgggaccctcagcaaacagatggagaggcagttctac
gaggcctga
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integrated database retrieval system
