Rana temporaria (common frog): 120919444
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Entry
120919444 CDS
T07929
Symbol
TSEN54
Name
(RefSeq) tRNA-splicing endonuclease subunit Sen54 isoform X1
KO
K15326
tRNA-splicing endonuclease subunit Sen54
Organism
rtem
Rana temporaria (common frog)
Brite
KEGG Orthology (KO) [BR:
rtem00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rtem03016
]
120919444 (TSEN54)
Transfer RNA biogenesis [BR:
rtem03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing endonuclease complex
120919444 (TSEN54)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
tRNA_int_end_N2
Motif
Other DBs
NCBI-GeneID:
120919444
NCBI-ProteinID:
XP_040187544
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All DBs
Position
12:60961551..61008404
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AA seq
501 aa
AA seq
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MLSPAELFAVRSRQQNIPQRSHGQKDFLSDGSEVQETKLQICRTEQWELLGEERVERLGS
LGRGVWKPEEELVELTRPAGKFWHTMGFTKAGRQCLLPEEGLYLLECGTIQLFYRDLALS
VQEAYEKLLSAGSIPLPYYQVYSHLKRLGYIVTRFNPSSVKTPYERQINLDSHVACSRKR
KRSSSPCLGSKPEASINNGKEQINVIAASTFCPSEENTPSSTVPLHQSSQQAIEEIDRCH
SDTHEKSPCKSSQLALETCKSASRFPTSSQWDFAKLCFPNCAPDQPCVKLRDPEPTLIPE
NVSGRPVDISCWLGKLNLRREKASRREQEQWDWERKYKISINADPKVKKCTNWKEYKALL
QENACQQDQDRPPHLWKSTVQPLLRPGSIKSTASVLEEITVMSQSTMLDENKRIQKMANL
PQIHYNLYQADGTSVFRKSKPGKPYAHLCVRSFDEQIPTLLTLKNLAYQSGDVPVVFALV
DYGEVAFYTFKDFQLPVDVYP
NT seq
1506 nt
NT seq
+upstream
nt +downstream
nt
atgttaagtccagcagagttgttcgcagtgcgaagtcggcagcagaacattcctcagcgc
tctcatgggcagaaggactttttatcagatggctcggaagttcaggagacgaagttgcag
atctgtcgtacagaacagtgggaactcttaggagaagaacgagttgagcgtttgggaagt
ttggggagaggagtatggaagccagaggaagaattagtggaactgacacggcctgcgggc
aaattttggcatacaatgggttttaccaaggcagggagacagtgcctgctgcccgaggaa
gggctctacctgcttgaatgtggcacaatccagcttttctatagggatctagcactgtct
gtccaggaggcctatgagaaactactttcagctggttcaatccccttgccatactaccag
gtttatagccatttgaagagactgggctacattgtcacacgctttaacccaagttctgta
aaaacgccatatgagaggcagataaacttggatagccatgttgcatgcagccgtaaacgc
aaaagaagctcaagtccttgtttgggatcaaagcctgaagcctcaataaacaatggcaaa
gaacaaatcaatgtgattgctgctagtaccttctgccccagtgaagagaatacaccatct
tccacagtgcccttacatcagagtagtcaacaagccatcgaagaaatagacagatgccat
tcagatacccatgaaaaatctccatgcaagtcttctcagcttgccctagaaacatgcaaa
tcagcatcaagatttccaaccagttctcaatgggactttgccaaactttgttttccaaat
tgtgcccctgatcaaccctgtgttaagcttcgagacccagagccgactctgataccagag
aacgtgtctggccgtcccgtggacatatcatgttggttagggaagctgaacttgcgtagg
gagaaggcatctcgaagagagcaagaacaatgggactgggagcgcaagtacaaaatcagt
atcaatgctgaccccaaagtaaagaaatgcaccaattggaaggaatacaaggcgctcctg
caggagaatgcatgtcagcaagaccaagatagacctccacatctctggaagagtactgtt
cagccactgctgaggcctggatctattaaatctacagcttctgttttggaagagatcaca
gtaatgagccagtctactatgctggatgagaacaagaggattcaaaagatggcaaacctt
ccacagatccactataacctgtatcaggctgatggaacctcggtatttaggaagtctaaa
ccaggaaagccctatgcacatttgtgtgtacgaagctttgatgagcagattcccactcta
ctcacgcttaagaacctggcctatcaaagcggagatgtacctgtggtgtttgctctggtg
gattatggagaagtggccttttacacgttcaaagactttcagctgcctgtggatgtatat
ccttga
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