Raoultella terrigena: NCTC13098_01251
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Entry
NCTC13098_01251 CDS
T06046
Name
(GenBank) translocation protein TolB
KO
K01730
oligogalacturonide lyase [EC:
4.2.2.6
]
Organism
rtg
Raoultella terrigena
Pathway
rtg00040
Pentose and glucuronate interconversions
rtg01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rtg00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
NCTC13098_01251
Enzymes [BR:
rtg01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.6 oligogalacturonide lyase
NCTC13098_01251
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Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase22
PD40
Motif
Other DBs
NCBI-ProteinID:
VDR24952
UniProt:
A0A3P8KTA9
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All DBs
Position
1:complement(1034929..1035846)
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AA seq
305 aa
AA seq
DB search
MAKGMRVKLNYEVSRDPDTGAEVTRLTPPEVTCHRNYFYQKCFFNDGSHLLFAGEFDGHW
NYYLLDIAAAEAVQLTEGAGDNTFGGFLSPDDTSLYYVKNDRTLLEVNLTTLQEREVYRV
ADEWVGYGTWVANSDCSKLVGIEIAKSDWTPLNDWQTFHDFFHKGPHCRLLGVDLQTGES
RTIHEEKNWLGHPIYRPFDDHTVAFCHEGPHDLVDARMWMVNEDGTGVRKVKEHAEGESC
THEFWVPDGSALVYVSYLKGQQGRTVYRFNPDSGVNEALMQMPACSHLMSNLTARCWWAT
VPVPR
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atggctaaaggcatgcgggtaaaactcaactatgaagtcagccgcgatcccgataccggg
gcagaggtcacccgcttaacccctccggaagtgacctgccatcgtaactatttctatcag
aaatgctttttcaacgacggtagccacctgctgttcgccggtgaattcgacgggcactgg
aactactacctgctggacatcgccgctgccgaagccgtccagctcaccgaaggggccggc
gacaacaccttcggcggcttcctctcgccggacgacacttccctctattacgttaaaaat
gaccgcacgctgctggaagttaacctcaccaccctgcaggagcgcgaagtctatcgcgtt
gccgacgagtgggtgggctacggaacctgggtcgccaacagcgactgcagcaagctggtc
ggcattgagatcgccaaaagcgactggacgccgctcaacgactggcagaccttccacgac
ttcttccataagggcccgcactgccgcctgctgggcgtcgatttgcaaaccggtgaaagc
cgcaccatccatgaagagaaaaactggctgggccatcccatttatcggccgtttgatgac
cacaccgtcgccttctgccacgaaggcccgcacgatctcgtcgatgcccgcatgtggatg
gtgaatgaagacggcaccggcgtgcgtaaagtcaaagagcatgccgagggcgaaagctgc
acccacgaattctgggtgcccgacggctcggcgctggtgtacgtctcctacctcaagggt
cagcagggacgcaccgtttaccgctttaatccggatagcggcgttaacgaagcgctgatg
cagatgcccgcctgttcgcatctgatgagtaatttgacggcacgctgctggtgggcgacg
gttccggtaccccggtag
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