KEGG   Rhodanobacter thiooxydans: LRK53_02635
Entry
LRK53_02635       CDS       T08065                                 
Symbol
cas3f
Name
(GenBank) type I-F CRISPR-associated helicase Cas3f
  KO
K07012  CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4]
Organism
rth  Rhodanobacter thiooxydans
Brite
KEGG Orthology (KO) [BR:rth00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:rth02048]
    LRK53_02635 (cas3f)
Enzymes [BR:rth01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     LRK53_02635 (cas3f)
Prokaryotic defense system [BR:rth02048]
 CRISPR-Cas system
  Type I CRISPR-Cas system
   Type I signiture cas proteins
    LRK53_02635 (cas3f)
SSDB
Motif
Pfam: Cas3_I-F_Cas2 Cas3-like_C DEAD Cas3_HD HD
Other DBs
NCBI-ProteinID: UJJ55320
LinkDB
Position
complement(605602..609039)
AA seq 1145 aa
MNVLLVSQCDKRALTETRRILDQFAERRGDRTWQTPITQAGLDTLRRLLRKTARKNTAVA
CHWIRGADHSELLWVVGDARRFNAEGTVPTNTTSSDVLRKGDENDWHSAQDIRLLAQLAA
LLHDLGKASVAFQLRLVGKLDERNRYRHEWVSLRLFLAFVGKDDDAGWLSRLASEEEGND
ADWTAPDRYLRDGVDAGIERTPFRALAAQAPLAAAIGWLIVTHHRLPLVPVPRPDDSGQD
WLGKRAGRFEQTWLETPLAQVAHDWNEIDQHSTAGQALPYWQLAGELPAMAPAWRTQARR
GAKALLQLRARRDADWLGNPYAMHLARLALMLADHHYSSLGADDAGNPVAERTRFVQAGQ
RVFANTRKDRQGKTRLNQSLLEHLLGVGHTASLIAHALPNFERHLPRLANHRGLRKRSGD
ARFAWQDKAFDAAAGLREAAREHGAFIVNMASTGCGKTLANARVLYALADPQLGLRMSYA
LGLRTLTLQTGRSYRHDLHLNDDELAVMVGGSANHALFEHYEAKAEASGSASVQALIEED
SHVLYEGNVTDHPLLSRALADPEIRKLISAPMLVCTVDHLAPATESLRAGRQIAPMLRLM
SSDLVLDELDDYELDDLPALTRLMHWAGLLGSRVVLSSATLPPALVEGMFMAYRAGRRHY
QRNRGRDGSAERPVEVPCLWTDEFSAQADTLSDVDGFATAHARFVERRVAKLQGAEPLRL
AELLPIDIAARQHERIHAEFASHVRDSCLRLHRDHAQPDPVTGKRVSFGLVRMANIDPIF
EVASRLYTQTAPEGTRIHLCVYHARFPLVQRSAIEAMLDAAFNRRNEDAVWQLPQIRCAL
DMHPEPDQLFMVLASPVCEVGRDWDADWAVAEPSSMRSLIQLAGRVQRHRRKPPHAPNVL
VFDTNLKGIERRDGRQPVFTRPGFETERDNGRFLLVSHSLHMLLAENEYRHIDAQPRIRP
RTLQLQPCERWVDLEQARIRAAMLPMPPAPATRSTRRSAAPSPRLERDYAPAAWESPRAA
LTGVLAQQQPFRHDEQPGTTLAWLPEEDGDALQPHRVEDAPGGKRGEKLYISAKELLHEV
ALNVAPGISCWGEFDLSSLVGEQAEAQDLPLDLAARRFTTVEVPFLKENHQGWRWHPWLG
FTRQR
NT seq 3438 nt   +upstreamnt  +downstreamnt
atgaatgtgctgctggtcagccagtgcgacaagcgcgcactcaccgaaacccggcgcatc
ctcgaccagttcgccgaacggcgtggcgaccgtacctggcagacaccgattacccaggcc
gggctggataccttgcggagactcttgcgcaagaccgcacgcaagaacaccgcggtggcc
tgccactggatacgcggcgccgaccacagcgagctcttgtgggtcgtcggtgacgcgcga
cgcttcaacgccgagggcacggtgccgaccaacaccacgtccagcgacgtattgcgcaag
ggcgacgagaacgattggcacagcgcgcaggacattcgtctgctggcccagctcgccgca
ctgctgcacgaccttggcaaggccagcgtggcgttccagctacgcctcgttggcaagctc
gacgagcgcaaccgctaccgtcacgaatgggtatcgctgcggctgttcctggccttcgtg
ggcaaggacgacgatgccggctggctgagccggctcgccagcgaggaggaaggcaacgac
gccgactggaccgcaccggaccgttacctgcgcgatggggtggatgcaggtatcgagcgc
acgccatttcgcgctctcgccgcgcaggcacctctcgccgccgcgatcggctggttgatc
gtcacgcatcaccgcctgccgctcgtccccgtgcccagaccggacgacagcggccaggac
tggctgggcaagcgcgcgggtcgcttcgagcagacctggctggaaactccgctggcgcaa
gtcgcccatgactggaacgagatcgaccagcactccacggcggggcaagccttgccgtac
tggcagttggcgggcgagcttcccgccatggcacccgcatggcgcacgcaggcccggcgc
ggcgccaaggccttgctgcagcttcgtgcacggcgcgatgcggattggctgggcaatccc
tacgcgatgcatctggcccggctcgcgctgatgctggccgaccatcactattccagcctg
ggcgcggacgacgccggcaatccggtggccgagcgaacgcgtttcgtgcaggcgggtcag
cgcgtgtttgccaacacccgcaaggacaggcaggggaaaacccggctcaaccagtcgctg
ctggaacacctcctcggcgtcggccataccgccagcctgatcgcccatgcgctgcccaat
ttcgagcgccacttgcctcgcctcgccaaccaccgcggcctgcgcaagcgcagcggcgac
gcacgcttcgcctggcaggacaaggccttcgatgccgccgccggcctgcgcgaggcagcg
cgcgaacatggcgctttcatcgtcaacatggcctccaccggctgcggcaagacgctggcc
aacgcccgcgtcctgtatgccctggccgacccgcaactgggcctgcggatgagttatgcg
ctggggttgcgcacgctcaccttgcagacgggacgcagctatcgccacgacctgcacttg
aacgatgacgagctggcggtgatggtgggcggatcggccaatcacgccctgttcgaacat
tacgaagcgaaagccgaagccagcggctcagcgtccgtgcaggcgctgatcgaggaagac
agccacgtgctctacgagggcaacgtgaccgaccacccgttgctgtcgcgtgcgctggcc
gaccccgagatccgcaagctgatctccgcgccgatgctggtatgcaccgtcgatcacctc
gcgcccgccaccgaatcgctgcgtgccggccgccagatcgcgccgatgctgcggctgatg
agcagcgacctggtgctcgacgaactggacgactacgagctcgatgacctgcccgcgctg
acccggctgatgcactgggctggcctgctcggcagccgcgtggtgctgtcctcggccacc
ctgccgccggccctggtggagggcatgttcatggcctatcgcgccggtcgccgccactac
cagcgcaaccgtgggcgcgacggtagtgccgagcggcctgtcgaagtgccttgcctgtgg
acagacgaattcagtgcgcaagccgacaccctttccgacgttgacggcttcgccaccgcc
cacgcgcgtttcgtcgaacgtcgcgtggccaagctgcaaggcgccgaacccctgcgcctc
gccgagctgctgccgatcgacatcgccgccagacaacacgagcgcatccatgccgagttt
gccagtcatgtgcgcgactcgtgcctgcgcctgcaccgcgatcacgcccaaccggatccc
gtcaccggcaagcgcgtcagcttcggcctggtgcgcatggccaacatcgacccgatcttc
gaggtggccagcaggctctacacgcagaccgcgccggagggtacacgcatccacctgtgc
gtgtatcacgcccgttttccgctggtgcagcgctcggccatcgaagccatgctggatgcc
gcgttcaatcgacgcaatgaagacgcggtatggcaactgccgcagatacggtgcgcactc
gatatgcaccccgaacccgaccagctgttcatggtactggcctcgccggtgtgcgaagtg
ggccgcgactgggatgccgactgggcggtagccgaaccgtcctcaatgcgctcgctgatc
cagctcgccggccgcgtgcagcgccatcgacgcaagccaccgcacgcacccaacgtgctg
gtgttcgataccaacctcaaaggcatcgaacggcgtgacggccgccagccggtattcacc
cgccccggcttcgagaccgaacgcgacaacggccgtttcctgctggtcagccacagcctg
cacatgctccttgccgagaacgaataccgccatatcgacgcccagccgcgcatccgaccg
cgcacgctccagctgcagccatgcgagcgctgggtggatctggaacaggcgcgtatccgc
gccgccatgctgccgatgccacctgcgccagccactcgctccacacgccgcagcgctgca
ccatccccacggctggaacgcgattacgcgcccgcggcctgggaatctccccgggccgcg
cttaccggtgtgctggcgcagcagcaaccgtttcgccacgacgagcaacccggcaccacg
ctggcttggctgccggaagaggatggggacgctttgcagccgcaccgtgtggaagacgcg
ccgggtggcaaacgtggcgagaagctctatatctccgccaaggaactgcttcacgaagtc
gcgctgaatgttgctcccggcatcagctgctggggcgagttcgacctgtcgtcgctggtg
ggcgagcaggccgaagcgcaggacctgccgctcgatcttgccgcccgcagattcaccacc
gtggaagtgccttttctcaaagagaaccatcaaggttggcgctggcacccatggctcggc
ttcaccagacaacgctga

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