Ruminococcus torques: RTO_19450
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Entry
RTO_19450 CDS
T02606
Name
(GenBank) DNA topoisomerase IV subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
rto
Ruminococcus torques
Brite
KEGG Orthology (KO) [BR:
rto00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rto03032
]
RTO_19450
03400 DNA repair and recombination proteins [BR:
rto03400
]
RTO_19450
Enzymes [BR:
rto01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
RTO_19450
DNA replication proteins [BR:
rto03032
]
Prokaryotic type
DNA Topoisomerases
RTO_19450
DNA repair and recombination proteins [BR:
rto03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
RTO_19450
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
HATPase_c_3
Motif
Other DBs
NCBI-ProteinID:
CBL26491
UniProt:
D4M5H9
LinkDB
All DBs
Position
2017458..2019380
Genome browser
AA seq
640 aa
AA seq
DB search
MAGNNTYDAGSIAVLEGLEAVRKRPGMYIGSVSTKGLNHLIYEIVDNAVDEHLAGFCSEI
QVTLEKDGSATVSDNGRGVPVDMHQKGVSAARLVYTTLHAGGKFDDSAYKTSGGLHGVGS
SVVNALSTYMDVKISRDGFVHHDRYERGIPVIELEDGLLPKIGKTRKTGTTVNFLPDDTI
FEKTKFKAEEVKSRLHETAYLNPNLTIVFDDKREGSVEHIVYHEPEGIIGFIQDLNRKKE
VLHDPVYFKGEADGIEVEVTLQYVNEFHENVLGFCNNIYNAEGGTHLTGFKTTFTTVMNQ
YAREIGILKEKDANFTGADIRNGMTAIVSIKHPDPRFEGQTKTKLDNPDAAKAVSKVTGE
EIVRFFDRNLDTLKTVLSSAEKAAKIRKTEEKAKTNLLTKQKYSFDSNGKLANCESRDPK
KCEIFIVEGDSAGGSAKTARNRNYQAILPIRGKILNVEKASIDKVLANAEIKTMINAFGC
GFSEGYGNDFDITKLRYDKIIIMADADVDGAHISTLLLTLFYRFMPELIFEGHVYIAMPP
LYKAMPKSGEEEYLYDDKALERYRKTHTGPFTLQRYKGLGEMDAEQLWETTLDPERRMLK
RVEIEDARMASSVTEMLMGTEVPPRRNFIYENATEAELDI
NT seq
1923 nt
NT seq
+upstream
nt +downstream
nt
atggcgggaaataatacatacgatgcagggagtatcgcggtattggaaggtcttgaggca
gtacggaaacgcccgggaatgtacataggaagtgtttctacaaaaggactgaatcatctg
atctatgagatcgtggacaatgcagtagatgagcacctggcaggattctgcagtgagatc
caggtgacattggaaaaagacggatctgcaaccgtttcagataatggtcgtggagttccg
gttgatatgcatcagaagggtgtatctgcggctcgtctggtttatacgacactccatgca
ggtggtaagtttgatgattctgcatataagacaagtggtggacttcacggagtaggttcc
tctgttgtaaatgctctttctacttatatggatgtgaagatcagcagggatggatttgtt
catcatgaccggtacgagagaggaatcccggtgatcgaactggaagatggacttcttcct
aagatcggaaagacgagaaagacgggaacaacggtaaattttctgccggatgatacgatc
tttgagaagacgaagttcaaagcggaagaggttaagagccgtctgcatgagactgcgtat
ctgaatccgaatctgacgatcgtgtttgatgataagagagagggaagtgttgagcacatc
gtttatcacgaaccggaaggaatcattggatttatccaggatctgaaccgtaagaaagaa
gtacttcatgacccggtttattttaaaggggaagcagacgggattgaagtagaggtaaca
ctgcagtatgtgaatgagtttcatgagaatgtacttggattttgtaataatatttataat
gcagagggcggaacacatctgacaggatttaagacaacctttacaactgtcatgaaccag
tatgcgagagagataggaatcctgaaagaaaaggatgcgaattttaccggtgcagatatc
cgtaacggaatgacagcaattgtatccattaagcacccagatccgagatttgaggggcag
acgaagacaaagttggataacccggatgcggcgaaagcagtcagcaaggtaacaggagaa
gagattgttcgtttcttcgatcgaaatctggatacacttaagacagttctttccagtgcg
gagaaagctgcgaagatccgtaagacagaagagaaggcaaagaccaatctcctgacaaag
cagaagtattcttttgacagtaacggaaagctggcaaactgtgagagcagagatccgaag
aagtgtgagatctttatcgtcgagggagattccgccggcggttctgcgaagacagcgaga
aacagaaattatcaggcaattcttccgattcgtggtaagatcttaaatgttgagaaagca
agtattgataaggtgcttgccaatgcagagatcaagacgatgatcaatgcatttggctgc
ggattttctgaaggatacggaaatgactttgatattacaaagttgagatatgataagatc
atcatcatggccgatgccgatgtcgatggtgcacatatttctaccttattgctcacctta
ttctatcgctttatgccggagcttatttttgaaggacatgtatatattgcaatgccgcca
ctttataaggcaatgccaaagagtggagaagaagagtatctgtatgatgataaggcactg
gaacgttatagaaagacacatacaggtccgttcacacttcagcgttacaaaggtcttgga
gagatggatgcggagcagctctgggagacaacactggatccggagagacgtatgttaaaa
cgagtagagattgaggatgcccgaatggcttcgagcgtaacggagatgctgatgggaact
gaagtaccgccgcgtcgtaattttatctatgaaaatgcgacagaggcagaactggatatc
taa
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