Rhincodon typus (whale shark): 109910639
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Entry
109910639 CDS
T06055
Name
(RefSeq) glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1
KO
K00731
glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase [EC:
2.4.1.122
]
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp00512
Mucin type O-glycan biosynthesis
rtp00514
Other types of O-glycan biosynthesis
rtp01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00512 Mucin type O-glycan biosynthesis
109910639
00514 Other types of O-glycan biosynthesis
109910639
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
rtp01003
]
109910639
Enzymes [BR:
rtp01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.122 N-acetylgalactosaminide beta-1,3-galactosyltransferase
109910639
Glycosyltransferases [BR:
rtp01003
]
Glycan extension
Type 3 chain
109910639
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fringe
Galactosyl_T
Motif
Other DBs
NCBI-GeneID:
109910639
NCBI-ProteinID:
XP_020365443
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All DBs
Position
2:73187636..73218663
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AA seq
348 aa
AA seq
DB search
MAISRSVISLLMFCCGLGLGFIICRLAISAIKKEAPQHSHLIFNDPHGHLEDSHHHQHHQ
NLQGEMNFNADVSQHQDENRSVADELYKTVRILCWVMTGPQNLATKTKHVKATWSKKCNV
VLFMSSEEDKDFPTVGLGVKEGRDQLYWKTIKAFQYVHEHHLNDADWFMKADDDTYVVVD
NLRWLLSKYSPDQPIFFGRKFKPYVKQGYMSGGAGYVLSKEALKRFVDAFKTGKCTHFTS
TEDLAMGRCMETVNVEAGDSRDTNKRETFHPFPPEHHLSKSYLPKTFWYWNYCFYPAKEG
PECCSDLAVSFHYIDSKTMYYLEYMTYHLRPYGYKFRYNPDSLPKKLE
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
atggcaatttcacggtctgtaatttctctgctcatgttttgttgtgggttgggcttagga
ttcatcatatgcagactagcaattagtgcaataaaaaaagaagcacctcagcacagtcat
ctgattttcaatgaccctcatggccacttggaagactctcaccatcaccaacaccatcaa
aatcttcaaggagagatgaacttcaatgctgacgtcagtcaacatcaagatgaaaacaga
agtgttgcagatgagctatataagacagtgcgaatcctgtgctgggtgatgactgggccc
cagaaccttgccacaaagaccaaacatgtcaaagctacatggagcaaaaaatgtaatgtc
gtgcttttcatgagctcagaagaagataaagatttccctacagtgggactgggtgttaaa
gaaggcagggaccaattatattggaaaactattaaagcttttcagtatgttcatgaacat
cacttgaatgatgctgattggtttatgaaagcagatgatgacacttacgtagtggttgac
aatttgcgctggctgctatcaaagtactctcctgaccaaccgatattctttggcagaaaa
ttcaaaccatatgttaagcaaggatacatgagtggtggagctggatatgtgttgagcaag
gaagcactgaaaagatttgttgatgcctttaagaccgggaagtgcactcattttacatct
actgaagatttagctatggggagatgtatggagactgttaacgtagaagctggtgattcc
agggatacaaataaaagagaaacatttcatccctttccaccagaacatcatttatcaaaa
agctacctacccaaaaccttctggtactggaactattgtttttaccctgcaaaagaggga
cccgaatgttgctctgatctggcagtatcgtttcactacattgattccaagaccatgtac
tatttggaatacatgacttaccatctacgaccatatggctacaagtttagatataatcca
gattctctcccaaaaaagttggagtag
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