Rhincodon typus (whale shark): 109917859
Help
Entry
109917859 CDS
T06055
Name
(RefSeq) ATP-dependent zinc metalloprotease YME1L1
KO
K08955
ATP-dependent metalloprotease [EC:3.4.24.-]
Organism
rtp
Rhincodon typus (whale shark)
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
rtp01002
]
109917859
Peptidases and inhibitors [BR:
rtp01002
]
Metallo peptidases
Family M41: FtsH endopeptidase family
109917859
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M41
AAA
AAA_lid_3
AAA_16
TIP49
RuvB_N
AAA_5
AAA_22
FumaraseC_C
Mg_chelatase
IstB_IS21
DUF815
AAA_17
Zeta_toxin
nSTAND3
AAA_14
Motif
Other DBs
NCBI-GeneID:
109917859
NCBI-ProteinID:
XP_048465498
LinkDB
All DBs
Position
2:complement(34971977..35032507)
Genome browser
AA seq
717 aa
AA seq
DB search
MFSLSTFQPQVTVPLSQLISTFHSLKSSASSVSSASIQCLQREAPPERDQVNEPVLNLRE
FGLSDLKTSQLTELTDRLLPCLSPTDSNTEQSSCWQISHVSSQSFFENKYGFSSNIFNVL
RASQLSRQYPRPLQTLCSKLHLCPIQEQIRGFKTLRSRARRLAVSDNLVESESIAPSSFM
KGLLLRDRGREVENLDSLIKTKNIPEAHQDAFKTGFAEGFLKAQALTQRTNDSLRRTRLV
LLFLLLLGIYGLSRTPFLSVRFRTTSGLDAAVDPIQMKNVTFEHVKGVEEAKQELQEVVE
FLKNPQKFTALGGKLPKGILLVGPPGNGKTLLARAVAGEADVPFYYASGSEFDEMFVGVG
ASRIRNLFREAKANAPCVIFIDELDSVGGKRIESPMHPYSRQTINQLLAEMDGFKPNEGV
IIIGATNFPEALDNALVRPGRFDMQVTVPRPDIRGRIEILKWYLGKVKVDPAIDAEIIAR
GTVGFSGAELENLVNQAALKAAVDEKDQVTMKDLEFAKDKILMGPERRSIEIDAKNKTIT
AYHESGHAIVAHFTKNAMPINKATIMPRGPTLGHVSLLPESDRWSETRAQLLAQMDVSMG
GRVAEELIFGTEQITTGASSDFDNATKIAKLMVTKFGMSDKLGVMTYSDPERVSPDTQSA
IEQEVRILLRDSYERAKQILKTHAKEHKNLAEALLKYETLDAKEIQMVLEGKRLELK
NT seq
2154 nt
NT seq
+upstream
nt +downstream
nt
atgttttccctgtctacgtttcagcctcaggtaactgtccctctaagtcagctgatcagc
actttccattcccttaaaagttcggcaagctcagtcagttctgcatcaatacagtgtctg
caacgagaagcacccccagaacgtgatcaagttaatgagcctgttcttaacttacgggaa
tttggattatctgatttgaaaaccagccaactaactgaattgacagacagattgctccca
tgtttgtctccaactgattcaaatactgaacagtcatcatgttggcaaatctcccacgtt
tcatcacagtctttttttgaaaataaatatggattttcgagcaacattttcaatgtgcta
cgtgcatctcagctttctcgacaatatcccaggccactacagactttatgttccaagctt
catctctgtccaatccaagagcaaattcgtggctttaagactctaaggtcaagagcaagg
aggctggcagtatcagataatttagttgaatcggaaagtattgctccttcttcttttatg
aaggggcttctgttaagagatcgaggaagagaggttgagaatttggacagcttgataaaa
acaaaaaacattcctgaggcacaccaagatgcatttaaaactggctttgcagagggattc
ctaaaagcacaagctcttacacagaggacaaatgactctttaagaagaacaagactggtt
cttctgttccttctcttgcttgggatttatggcctatccaggactccgttcttatctgta
cgatttcgcactacatcaggactggacgcagctgtggacccaattcagatgaaaaatgta
acctttgaacatgtgaaaggggtggaggaagcaaaacaggagctacaggaagtagtggaa
tttctgaaaaatcctcagaaattcactgcattaggaggcaaactacctaaaggcattctt
ttggtcggaccccctggaaatgggaaaaccctccttgcgagagctgttgcaggcgaagca
gatgtaccattctattatgcatcaggatcagaatttgatgaaatgtttgttggtgttgga
gcaagtaggataagaaatctgtttagggaggcaaaagcaaatgcaccctgtgtcatcttt
attgatgagctggattctgttggtgggaagagaatagaatcaccaatgcatccctattca
agacaaaccataaatcaactacttgcagagatggatggtttcaagcctaatgaaggtgtc
attataatcggagctacaaactttcctgaagcattggataatgctcttgttcggccaggt
agatttgatatgcaagttactgttcctagaccagatataagggggcgaatagaaatcctc
aagtggtatcttggcaaagttaaagttgacccagcaattgatgcagaaataatagctaga
ggcacagtgggtttctcgggagcagaactggagaacctcgtcaaccaggctgctctaaaa
gcagccgtagatgaaaaggatcaagttacaatgaaagacttggaatttgccaaggacaaa
atccttatgggtccagaacgcaggagtattgagattgatgctaaaaataaaactatcact
gcatatcatgaatccggtcatgcaatagtcgcacattttacaaaaaatgctatgcccatt
aacaaagctacaataatgccaagaggacctaccttgggacatgtgtcattgttaccagaa
agtgacaggtggagtgaaaccagagctcagttgcttgcacaaatggatgtcagcatgggt
gggagagtagccgaagaactcatctttggaacagaacaaattaccactggtgcttcgagt
gacttcgataatgcaaccaaaatagcaaagttgatggtcacaaaatttggaatgagtgat
aagcttggagtgatgacttattcggatccagagagagtaagcccagatacacaatctgct
attgaacaagaagtcaggatattattgagggattcttatgaaagagcaaagcaaatcttg
aagactcatgcaaaagaacacaaaaatcttgcagaggctttgttgaagtatgagacactg
gatgccaaagagatacaaatggttcttgagggaaagagactagaactaaaataa
DBGET
integrated database retrieval system
