Rhincodon typus (whale shark): 109922237
Help
Entry
109922237 CDS
T06055
Name
(RefSeq) POU domain, class 5, transcription factor 3
KO
K09367
POU domain transcription factor, class 5
Organism
rtp
Rhincodon typus (whale shark)
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rtp03000
]
109922237
03021 Transcription machinery [BR:
rtp03021
]
109922237
Transcription factors [BR:
rtp03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
109922237
Transcription machinery [BR:
rtp03021
]
Eukaryotic type
RNA polymerase III system
Other transcription-related factors
Octamer transcription factors
109922237
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pou
Homeodomain
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
109922237
NCBI-ProteinID:
XP_048472644
LinkDB
All DBs
Position
35:complement(23477859..23503843)
Genome browser
AA seq
270 aa
AA seq
DB search
MSVSPVQVLVRRWRRRIGPVATDGICGDFTVGWVRCRERRGSGGWLAVQETPTSEDLKHF
AKKLKKKRIIMGFTQAEVGLALGALYGKMFSQTTICRFEALQLSYKNMCKLRPLLQRWLE
EAKDNENFQELCSMEQRLATARKRKRRTSIDSNVKGLLEAAFIKCPKPSAQEIIQIADDL
NLEKDVVRVWFCNRRQKGKRALFHGGEDSEGVPGYGPLPMQHAPLGLPSPLAPHQGYVGE
AIGTVYTPHFHKGSLYRQQPAPAPGTMHSS
NT seq
813 nt
NT seq
+upstream
nt +downstream
nt
atgtcggtcagtccggtgcaggtgttggtgaggcgttggcggaggagaattggcccggtg
gcaacagatggtatctgtggtgactttactgttggttgggtccgatgtagagagcggcga
ggcagtggaggatggttggcagtgcaggagacccctacttcagaggatttgaagcacttt
gctaaaaaactgaagaagaaacggataattatggggttcacacaggctgaggtgggcctg
gctctcggcgctctgtacggcaagatgttcagccagaccaccatctgcaggttcgaagcg
ctgcagctgagctacaagaacatgtgtaagctgaggcccctgctccagcggtggttggag
gaggctaaggacaatgagaacttccaggagctgtgcagcatggaacagaggctggcaaca
gcccggaagaggaaacggcgtacaagcattgacagtaacgtgaaggggctgctggaggct
gccttcataaagtgtccaaaaccgtccgctcaggagattatccagatcgcagatgacctc
aatctggagaaagatgtcgtccgagtctggttctgcaatcggcgtcagaaaggaaagcgg
gcgctgttccacggcggagaggattctgagggagtgcccggctatggcccgctacccatg
caacatgccccactggggctgcccagtccacttgccccccaccaggggtacgttggggaa
gccatcggcactgtgtacactccccacttccacaaggggagcctgtaccgacaacagcct
gcgccagcgcctgggacgatgcactcgagctag
DBGET
integrated database retrieval system
