Rhincodon typus (whale shark): 109925118
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Entry
109925118 CDS
T06055
Name
(RefSeq) cyclic nucleotide-gated cation channel alpha-4-like
KO
K04951
cyclic nucleotide gated channel alpha 4
Organism
rtp
Rhincodon typus (whale shark)
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
rtp04040
]
109925118
Ion channels [BR:
rtp04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
109925118
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GFIT
Motif
Pfam:
Ion_trans
CLZ
cNMP_binding
Motif
Other DBs
NCBI-GeneID:
109925118
NCBI-ProteinID:
XP_020380683
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Position
6:1336557..1347709
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AA seq
606 aa
AA seq
DB search
MQCGVQQSQQQTVCSKHTARLEDTHISTSEGQTGEDGETGRVRPRWILDPMGDWYIRWLA
VSTIPVIYNWIILVGRWSFTDLQSNYLSVWLFLDYLSDLIYLLSMAVRFNTGYLEQGILV
TDRWQIAARYARSHGFKLDLLSLVPTDLLYVQFGVHSPAIRLNRLLTVRCLPEFLQRLET
RVFYPNTYRVLRTSAILVASIHWNACAYFALSRHIGFGQDPWVYPNISDPDNARLRRQYL
YSFYFSTLVLSTIGNIPKPVREEEFLFVMVDFLIAVLVFASIVGNMESIISKLDKAAHSV
VPDHQLIRDYLRSQRVNTKLQRRVTEWSQHLRLYKKVTNERHILQLLPDKLQAEVATCVH
LQTLRKVQLFQSCEQRVLYQLVMRLQPQVFSPGDYVCRKGDIGRAMYIVQDGCLAVVADD
GLRQLAVLEAGNYFGEISILNIAGSKSGNRRTANIRSVGYSDLFALGKDDLTEVLVDFPE
AKEMLEAKGQEMLLRMGLLDGVVAPSEAEKGRAVRNVGPLQNSFDLLQTRMARLMAEIES
SFQKINFRLDHLEDVLGVDEDPERKRNVEDPRLTQDQIEESRIIPGSRARRDPTKLTPCS
SKTELK
NT seq
1821 nt
NT seq
+upstream
nt +downstream
nt
atgcagtgtggggttcaacagagtcagcagcagacagtgtgcagcaagcacacagctcgc
cttgaggatacccacatcagtacgagtgaaggacagacaggagaggatggtgaaactgga
cgggtgaggccacgttggatcctggaccccatgggggattggtatattcgatggctcgca
gtgtctacaatccccgtcatctacaactggatcattcttgttggcaggtggagcttcact
gaccttcagtccaactacctgtctgtgtggctctttctggattacctctcagacctcatc
tacctactgagtatggcagtcaggtttaacacaggatatctggagcagggaatcttagtg
acagaccgctggcagattgctgcaaggtatgctcggagccatggcttcaagttggacctg
ctgtccttggtgcccacagatctcctgtacgttcagtttggtgttcacagtccagctatc
cggctcaatcggctactcacagtccgctgtctcccggagttcctgcagcgcctggagacc
cgtgtgttctatcccaacacctaccgggtgctccgtacctctgccatcctggtggccagc
atccactggaatgcctgtgcctactttgccctgtccaggcacattggctttgggcaagac
ccttgggtatatcccaacatctcggaccctgacaatgcccgcttgaggcgccagtacctc
tacagtttctacttctccaccctggtcctgagcacaatagggaacatcccaaagcctgta
cgggaggaggagttcctctttgtgatggtggatttcctcatcgctgtgctggtctttgcg
agcattgtggggaacatggagtcgatcatctccaagctggacaaggcggctcacagtgtt
gtccccgatcaccagctgatcagggattacctccgctcccaacgggtcaacacgaagctg
cagcgacgagtgaccgagtggtctcagcacctgcgcctctacaagaaggtaaccaacgag
agacacatcctgcagctgctcccggacaagctgcaggctgaggttgcaacctgtgtccac
ctccagacgctcaggaaggtccagcttttccagtcctgtgagcagcgtgtgctgtaccag
ctggtgatgagactgcaacctcaagtcttcagccctggtgactatgtgtgtcggaaaggg
gacataggcagggccatgtacatcgtacaggatgggtgcctggcggtggttgctgacgat
ggactgagacaactcgctgtccttgaggctggcaactattttggagaaatcagcatcctc
aacattgcagggagtaaatctggaaaccggagaactgcaaatattcggagtgttggatat
tcggatctttttgccctggggaaggatgatctgactgaggtgctggtggatttcccagag
gctaaggagatgctggaggcaaagggccaggagatgctgttgaggatggggctgttggat
ggagttgttgcaccaagtgaagcggagaaggggagagcggtgaggaatgtggggccgctg
cagaattcctttgacttgttacaaaccagaatggctcgcctgatggcggaaattgaatcc
agttttcaaaagatcaactttcggcttgaccaccttgaagatgtgctgggggttgatgaa
gacccggaaaggaaaaggaatgtcgaggatcccaggttgacccaggatcaaattgaagaa
tccaggatcattccaggatccagagccagacgagacccaaccaagctcaccccgtgcagc
tcaaagactgagctgaagtga
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