Rhincodon typus (whale shark): 109935509
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Entry
109935509 CDS
T06055
Symbol
igdcc4
Name
(RefSeq) immunoglobulin superfamily DCC subclass member 4
KO
K22657
immunoglobulin superfamily DCC subclass member 4
Organism
rtp
Rhincodon typus (whale shark)
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
rtp04515
]
109935509 (igdcc4)
Cell adhesion molecules [BR:
rtp04515
]
Immunoglobulin superfamily
Nope
109935509 (igdcc4)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
fn3
I-set
Ig_3
Ig_2
ig
Pur_ac_phosph_N
V-set
C2-set_2
Adeno_E3_CR2
Interfer-bind
Mid2
Motif
Other DBs
NCBI-GeneID:
109935509
NCBI-ProteinID:
XP_020389734
LinkDB
All DBs
Position
33:21798329..21914109
Genome browser
AA seq
1277 aa
AA seq
DB search
MALGQLCWHCVLTWILTVIFSEDKVNSLDLSCSIGPLQVILQPNQAVVLDCNLPAVDQPA
NITWKKEGIPVVDEEQHHVVPNGSLYISYVPWDSKNQDGNSSEGSYTCMSQNSFGAITSR
TAVIRFSTLSQFHRQPESQMVEENGIARFECGIYGLPLPLITWEKNQSTIPNHERFTVLP
NGILQIVDVQEGDAGAYRCLAKSGKWTRYSQHATLTVLQGFKSVPTDVVIIAHPKNVTVI
AGQTAIMECLAYADPTPFVSWIREDGKPVATDVIIVGRANLMIAHAQQYHSGVYVCRANK
PRTRQFVTAAAKLRVLAPPMITQFPETISRIRASTARFACKSDGEPTPRIRWLKNGEDIM
PNGRVKIQNSGSLVINQIGLEDAAYYQCIAENSLGMACTTAKLAVTIREGLPSAPKSVSA
TPLSSTSILVSWERPEHNSEQIIGFSLHYQKAVGTNNVEYQFAVNNDTTDLQVKDLQPNT
NYTFYVVAYSQLGASRTSRSVIVQTMEDVPSTAPQLSLSIPTLSNIRASWLPLSPELSNG
KITKYRVDYCTLKEDQIYSIEVDGNETQVMLPIVQSKKMYKVRIAASTTIGYGAPSEWTR
HLIPERNKLIMVPFAPTEMKVKAKVDSLLVTWQPPSNQVQIQGYKLYYRKTDVEDLSKEL
NETNRDEHWTKGPIRLRRKVKQYEITGLVSDRLYEIKLIAFNKQDDGYAAIWKGKTEKAP
AVTLDLPVVLPPPTQLRAESNSSRAIWLHWTRPPFTTVQIANYTVRCSPSGLKNASLVTY
FTSSEEEIFITSLKPFTRYEFAVQSNGIGVDGPFSGIIEGLTLSDKPSTPPSDMKLNPLN
AYSVRVRWLPPTEPNGIIVEYIILYNANYTQPDDLWNSLSKEGHIFSTDVQGLESDTRYF
FKMGAKTVVGTGPYSTAKDVQTLSKGILGLHDLLDVHSVTGIIVGVCLGLLCILLCICAS
FCNSKRREDSSGPDTHLTTKHGHYRRARKTSSTHSISHPHAHELETLMSTAAEDLSLPVK
TTELTKVQVFMDTPLPDDDIQINLKGAERNKHLPSGLNRVEAEVIVHSELSASERNSTCE
DGDWQSKEDLRLKSISASSTENLHSEYIPMLSTDDWKTKESIESDCTAVVAAQDWSEDLQ
NKCTLVLPEKDSQSFDICKASLSPVATEGMNCVDAEKHRDITDPQDNSSFHSKTKNGTMK
TVESPGLTNGFESIKGWKGSVNGFTLKNRNSESSCLKNAETRLSRCQTVITDGDDAAHHF
IASTITTTSVSEKDLCH
NT seq
3834 nt
NT seq
+upstream
nt +downstream
nt
atggcgctcggacagctctgttggcactgcgtcttgacttggattctaaccgtgatattt
tcggaagacaaagtgaattctttggatttgagctgcagtattggccctttgcaggtaata
ctgcaacctaatcaagcagtcgtgttagattgcaaccttcctgctgtagatcagcctgcc
aacataacatggaaaaaagagggaattcctgttgtggatgaagaacagcaccatgtggtt
cccaatggatcactctacatttcatatgtaccatgggactctaagaatcaagatggaaac
agcagtgaagggagttatacctgcatgtcccagaattcatttggggccataactagtcgg
actgcagtgatcagattctccactttgtcacaatttcatcggcagccagaatcacagatg
gtggaggaaaatggaattgctcgttttgaatgtggaatttatggactcccattgccactt
atcacatgggagaaaaaccaatcaactattccaaatcacgaaagatttacagtcctccca
aatggaattctgcaaattgtagatgtgcaagagggtgatgctggagcatatcgctgttta
gctaaaagtggaaagtggacacgctacagtcagcatgctactctcactgtattacaagga
tttaaatctgtccctacagatgtagtcatcattgcccacccaaagaatgtaactgttatt
gctggtcaaactgccattatggagtgcttagcatatgctgatccaacaccatttgtttcc
tggattcgtgaggatggtaaacctgttgctacagatgtcatcatagttggaagggcaaac
cttatgattgcacatgcacagcaatatcattctggcgtatatgtctgccgtgcaaataaa
ccccggacgcgacaatttgtcactgctgctgccaagttacgagtgctggccccaccaatg
attacacaatttcctgagacaatctctcgcattcgagcaagcactgctagatttgcctgt
aaatctgatggtgaacccactcctagaattcgctggctgaaaaacggagaggacataatg
cctaatggacgcgtgaagatccagaacagtggcagtttagtgattaatcaaattgggctg
gaggatgctgcttactaccagtgtattgcagagaatagtcttggaatggcatgcactaca
gccaaacttgctgtgacaattcgagagggtttgccgagtgctcccaaaagcgtgtctgct
acacctttatcaagtacttcgatcttggtgtcctgggagcgcccagaacacaacagtgaa
cagattattggattttcccttcactatcaaaaggcagtaggtacaaacaatgttgaatac
cagtttgcagtgaataatgacactacagaccttcaagtaaaagacttgcaaccaaacact
aattataccttttatgttgttgcttactcccaacttggtgccagtcggacctctcgttct
gtgattgtgcaaactatggaagatgtcccaagtactgctcctcagttgtccttatcgatt
cccaccttgtctaatatacgggcatcctggcttcctctttctccagagctcagcaatggt
aaaataacaaaatatcgcgttgattactgcacgttgaaagaagatcaaatttattcaatc
gaagttgatggaaatgagacacaagttatgcttcctattgtacaatcaaagaaaatgtac
aaagttcggattgcagcaagcaccactataggatatggtgcaccatcagaatggacccgg
cacctaatccctgaacgaaataagctaataatggttccctttgctccaacagaaatgaag
gtgaaggcaaaagtagactctctgctggtcacatggcagccaccatctaatcaagtccag
atccagggttacaagctttattacagaaaaacagatgtagaagatttgagcaaagaatta
aatgaaacaaatagagatgaacactggacaaaaggaccaatacgacttagaagaaaagtg
aagcaatatgaaattactggattagtttcagaccgactttacgaaattaagttgattgca
ttcaacaaacaagatgatggatatgcagcaatatggaaaggaaaaactgaaaaagcacct
gctgtgaccttggatctcccagtagtgctaccacctccaacccagctccgtgcagaatcc
aacagttccagggcaatttggttacactggacccgaccaccattcactacagtccaaatt
gcaaattatactgtgcgttgcagtccatcagggctcaagaatgcttctcttgtgacgtat
ttcacaagctctgaagaagagatttttatcactagcctgaagccatttaccagatacgaa
tttgcagttcagtccaatggaattggtgttgatggacctttcagtggcattattgagggg
ctgaccttgtctgacaaaccatcaactcctccatcagacatgaagttgaatccacttaat
gcctattctgtcagagttcgatggctgcctccaactgaaccaaatggcattatagttgaa
tacattattttgtataatgcaaactacacacaacctgatgacttgtggaattcactatcc
aaggaaggacacatattcagtaccgatgtgcagggactagagagtgacactcgctacttc
ttcaagatgggtgcaaagacagttgtcggaacaggaccatactccacagcaaaagatgtg
caaactctgtctaaaggaatattagggctgcatgatcttcttgatgtacattcagtgaca
ggcatcattgtgggtgtgtgtctcggactcctttgcattctcctctgcatctgtgccagt
ttctgcaacagcaagcggagagaagattcctcaggccctgatacccacctgaccaccaaa
catggtcactatcgcagggcaagaaaaacttcttcaactcacagtatttcccatccccac
gcacacgaactggaaacactaatgtctactgcagctgaagatctgtccctgcctgtcaag
acaaccgaactcactaaggttcaagtatttatggatacccctcttccagatgatgacatt
caaataaatttaaagggtgcagaaaggaacaaacacctgccttcaggtttgaatcgtgtt
gaagctgaagtcatagttcattctgaactatcagcatcagaaagaaactccacttgtgag
gacggagattggcaaagtaaggaagatctgcggcttaagtccatctcggcttcatctaca
gaaaatcttcacagtgagtatattcctatgttatcaactgatgactggaagacaaaggaa
agcattgagagtgactgcactgctgttgtagcagctcaagactggagtgaagatcttcaa
aacaaatgtactcttgttttgcccgagaaggatagtcagtcttttgatatttgcaaggct
tctttgtctcctgttgcaactgaagggatgaattgcgttgatgcagaaaagcacagggac
atcactgatcctcaggacaactcatcatttcattctaagactaaaaatggcacgatgaag
accgttgaatcccctgggctcactaatggttttgagagcattaagggttggaaaggatcg
gttaatggtttcactttgaaaaacagaaactcagaatcctcatgcctgaaaaatgcagaa
actcgactttctagatgccagactgtgatcacagatggggatgatgctgctcatcacttc
attgcctctactatcactactacctcagtatctgagaaagacttgtgtcattaa
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