Rhincodon typus (whale shark): 109935898
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Entry
109935898 CDS
T06055
Name
(RefSeq) probable E3 ubiquitin-protein ligase HERC3 isoform X1
Organism
rtp
Rhincodon typus (whale shark)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
RCC1
RCC1_2
Motif
Other DBs
NCBI-GeneID:
109935898
NCBI-ProteinID:
XP_048471198
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All DBs
Position
1:complement(168333878..168390347)
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AA seq
1009 aa
AA seq
DB search
MLCWGELGSASGQNPCSQSEEILKGERVHHVCSREGVTVFVLKNGKVYTKARGRKRKSKS
GSFVHFKEQKIHFADSGSSHILFLSKTGSLYYSEVNSKQLEAQAKEFSILKPQLLKGLND
RNVIQVACGNNHSLALTKDGQLFAWGQNTYGQLGLGTTDASQHNHQRVISLIGMPVAQIT
AGGEHSFALSLSGAVFGWGRNNHGQLGLKDTEDRHKPSHVKLLDCKKVVHVACGEEHTAV
LTKDGLVFTFGAGCYGQLGHNSTEDETKPHLVGYQIFGKKVSQIACGSYHTLVFVQSSGK
IYSFGRGDKGQLGNRETKDQLVPLLVNIMDIVNKNGNGNDHETKSVVRRIFAGGNQSFAE
CDRAVDLVSSTDQSALSTLSAFRRIMTVDNLLEQELNKNKRKAIVRAFSSPQVLCGSFLD
VSKNGHFKTNGETSGLDLSAVYQGFMNLAKNSLTLQVKNAVENNLIPSLPRSPTCVETLR
VYIIIPELVAVLGESGYSAMLLESLNRSILSLEESYFKILECWWCTMPYNFFMRLVRMYQ
KESHHLLQLTMKGTSPCNPQLHNSLKILQTLYKVNLNRDAKILEGNFYIPVMQVLKCSLT
LMNGFNVPQIHLQSYFTALRMVAQQLKPYPCIFDLETKLALLNLECRILQNNQIFQPLQL
QISRASIFQDALQGLKTQSAAYFTTIQVRFNGEPCYGHGVSQEFFTLFTQELYSNGRLFK
PKKCSKLLWFPKWLQEPEMDEAFYLVGILCRFAVSNGFICNFHFPLALYKKLLNVPPTLD
DLKELSPTLGKSFQDILDYEYDDIEDIYCQNFTINKKTADGNIIQQELIPDGSNIPLQKH
NRKQYVDAVVDYKLNISVKKQFEAFSRGFRSIYSLPIVDTFLPEELRDVIQGNTKYEWEL
LEQNAKYCDYQQTDRAVRNFWKVFASLPEEKKKRFLVFLSGTDRIPAGGIRNYCITILKS
RTNEPDSSYPRAYTCSKTLDLPNYSSIKILSEKLLHAIEFSEKFNAQPP
NT seq
3030 nt
NT seq
+upstream
nt +downstream
nt
atgttgtgttggggggagttgggctcagcgagcggacagaatccttgctctcagtcagag
gagattctcaaaggagagagggttcatcatgtttgcagccgggaaggagtcactgtgttt
gtgttgaaaaacggaaaagtttacaccaaagcccgcggacggaagcgaaaatcaaaatcg
ggaagttttgttcacttcaaagagcagaaaatccactttgccgacagtgggtcatcccac
atcctgttcctttccaagaccggaagtctttattatagtgaagtaaactcaaagcaactt
gaagctcaggcaaaggagttctccatactgaaaccacagttacttaagggtttgaatgac
agaaatgtcattcaagtggcctgtggaaacaatcactcactggcattgaccaaagacggt
caactctttgcctggggacagaacacttatggccagctcggtcttggtacaacagatgcc
tcccagcacaatcatcagcgtgtgatatccctcattgggatgccagtggcacagatcact
gcaggaggagaacacagcttcgccctgtctctctctggggcggtgtttggatggggaaga
aataatcacggacagctgggactcaaggacacagaggatagacataagcctagccacgta
aagctgttggattgtaagaaggttgtccatgtcgcttgtggagaagagcacactgctgtt
ctgacaaaggatgggcttgttttcacctttggagcggggtgttatgggcaacttggacac
aactctacagaggatgagactaaacctcatctggtcggttaccagatatttggaaagaaa
gtttctcaaatagcttgtggaagttaccacacacttgtcttcgttcaatcatctgggaag
atctattcctttggtcgtggagacaaagggcaacttggaaatagagaaaccaaagatcag
ctagtgcctcttctcgtcaacataatggatatagtcaacaagaatggaaatggaaatgat
catgaaacaaagtcagttgtgagaagaatatttgcaggaggaaaccaaagctttgcagag
tgtgatcgtgcagtggatttggtgtcctctactgaccaatctgccctctccacactcagt
gctttcaggcgaatcatgacagtggacaatttactggagcaggaattgaacaaaaacaag
agaaaggcaatcgttcgggcattttcttctcctcaagttctgtgtggaagtttcctggat
gtcagcaagaatggccatttcaaaacgaacggagagacgtctggcctggatttgtctgca
gtatatcagggcttcatgaatttggcaaaaaactccttaactttgcaggtgaagaatgca
gttgagaataacctgatcccatcgttacctcgatctccgacttgtgtggaaacattgcga
gtttacattataataccagaacttgttgctgttctaggagagtcagggtactcagcaatg
ctgctggaatctttaaacagatccattctctcacttgaagaaagttattttaaaattctt
gaatgctggtggtgtacaatgccttataatttcttcatgcgccttgtgaggatgtatcag
aaagaatcacatcaccttcttcaactcacaatgaaaggcacctcaccatgcaatccccaa
ctacacaattcattgaaaatcttacaaacactttacaaggtaaacttgaacagagatgca
aagattcttgagggaaatttctacattcctgtcatgcaggtgttgaagtgctctttaaca
ttaatgaatggctttaatgttccacaaattcaccttcaatcctacttcacagcacttcgc
atggttgcacagcaattaaagccatatccttgcatctttgatttggaaacaaaacttgca
ttattgaatctggaatgcagaatacttcaaaataaccagatctttcaaccactacagctc
cagatttcaagggcatcaatttttcaggacgcgctgcaaggcttaaagactcaatcagct
gcttattttacaacaattcaggtcaggtttaatggtgaaccatgttatggccatggggta
tctcaggagttcttcaccctctttactcaagaactgtatagcaatggacggctattcaaa
cccaagaaatgttctaagctactttggttccctaagtggttacaggaaccagaaatggat
gaagcattttatttggtgggaattctctgccgatttgctgtatccaatggttttatttgt
aattttcacttcccattggctttgtacaaaaagctgctcaatgtgccaccaacattggac
gatctgaaggaactttcacctacactgggaaaatcattccaggatatccttgactatgag
tacgacgacattgaagacatatattgtcagaattttactataaacaaaaaaacagcagat
ggcaacataattcagcaggaactcattcctgatggtagcaatatacctcttcaaaagcat
aatagaaaacagtatgttgatgctgtggtggattataagctaaacatatcagtgaagaaa
caatttgaagccttttctagaggtttcaggagcatatattcactgccaattgtggacaca
ttcctacctgaagaactaagggatgttatccaggggaacaccaaatacgagtgggagttg
ctggaacagaatgcaaaatactgcgattaccaacaaactgacagagcagtcaggaatttt
tggaaagtctttgcaagcttaccagaagagaagaaaaagcggtttcttgtctttctgtca
ggaactgacagaatcccagcaggagggattcggaattactgtattacgattttgaaaagc
cggaccaatgaaccagattcctcgtatcctcgtgcctacacctgtagcaagaccttggac
ctccccaactatagcagcatcaaaatattgagcgaaaagttacttcatgcaattgaattc
agtgaaaaattcaatgcacaaccaccctaa
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