Rhincodon typus (whale shark): 109937248
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Entry
109937248 CDS
T06055
Name
(RefSeq) LOW QUALITY PROTEIN: structural maintenance of chromosomes protein 1A-like
KO
K06636
structural maintenance of chromosome 1
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp04110
Cell cycle
rtp04114
Oocyte meiosis
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
109937248
04114 Oocyte meiosis
109937248
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
rtp03036
]
109937248
Chromosome and associated proteins [BR:
rtp03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
109937248
Meiosis-specific proteins
Cohesin complex and associated proteins
109937248
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Gene cluster
GFIT
Motif
Pfam:
SMC_N
AAA_21
AAA_23
SMC_hinge
AAA_29
SbcC_Walker_B
DUF2605
Motif
Other DBs
NCBI-GeneID:
109937248
NCBI-ProteinID:
XP_048463803
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Position
18:18652964..18791894
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AA seq
1112 aa
AA seq
DB search
MGTLQLIEVENFKSWRGRQLIGPFMRFNCIIGPNGSGKSNVMDAISFVMGERTANLRVKH
IKDLIHGAHIRHPVSSTARVTMLYQRENEEELSFTRAIIGNSSEFRFNNQIISRAEYTNE
LEKIGILLKGRNCLVFQGAVENIAMKKPKERTQLFEQVSNSGELSNEYDKKKKEMMNAEE
EARFNYNKKKNVAVERRHAKHEKEEADRYQMLIEELKASKIQLHLFLLYYNEKFIENINE
DLQASNKAVSSQKVRQVAAEEEVRTKKKELGKLNRELQQIEKEIKVHDFNLNEKRPSYIK
AKENTRHYVKKVEVARKSLKSCEKQYSIHQQAVKELEFELDDVSKVWKAFEEEAVAEISS
RGRSMELEESQIQQYKELKQLVRKQVSSMAQTLEKLRREQKADRDKLELDQRNYKDLQIR
IKHTELEIEDYIKRIEKLEEYINTCKXVSIEQQQDLIKPVNEQLREIKGAKMMIDVVQCV
SPQLKKVLQFVCGNGLVCETLKEARQIAFEGAERLKTVALDGTLFLKSGVISGGSSDLKF
KARCWDEKQISQLKEMKEKLTNELRELMKVNRKEAELRQLQAQAKGTETRMRYSFSDVEQ
TRKKNLTNSYMEKSKLESGLANLQSEMTVVSLNIEDRQVKMQQTQNQMNEVEDRVFEDFC
TKIGVANIREYEDEHVKQLEEIDKKRSEFENQKTRLSIQLEYSYSQFEEDIKKIQRWKET
IEKDEEEIVKLKKEEMELMKIVDEALVIQQDLNNRLLIKKTHVKDAQKELDEVRKKLSNI
SRELAKLQKEHVCLETSIEQKRLEKHNLLLACKVQDVQIELLQGNLEEISEVLMEVESTQ
AARAVFELEAAFEINYTGLPTDLKGLTSLKDIEMEENRLNKLLEEKETILQRTAAPNLRA
VEKLQNTWDKFQESLSAFETSRKKARICRQDFEYVKRRRYDLFNQCFEHVSVKIDQIYKM
MCQNTSAQAFLSPENSEEPYLDGIGYNCVAPGKRFMPMDNLSGGEKSVAALALLFAIHSY
RPAPFFVLDEVDAALDNTNIGKVTNYIRDQSRKNFQMIVISLKEEFYSKADALLGVYPEQ
GEYMSSQLLTFDLTSYPENTRREETLQPRQEE
NT seq
3339 nt
NT seq
+upstream
nt +downstream
nt
atgggaactttacaattaattgaagttgaaaatttcaagtcgtggcggggccgacaattg
atcgggcccttcatgcggtttaactgcatcatcggaccaaatggatcaggcaaatccaat
gtaatggatgctatcagttttgtgatgggtgagagaactgccaacctcagagtgaagcac
atcaaagatctgattcacggtgctcatatacggcatcctgtgtcatctactgcaagggtc
accatgctgtatcaaagagaaaatgaagaggagctgtcatttactagagccattattggg
aactcctcagagtttcgcttcaacaatcaaattattagtcgtgcggaatacacaaatgag
cttgagaaaattggcattttactgaaaggcagaaactgtctggtgtttcagggcgctgtg
gagaacatagcaatgaagaaacctaaagagagaacgcagttgtttgaacaagttagcaac
tcaggagaactgtctaatgaatatgacaagaagaagaaagaaatgatgaacgcagaagaa
gaagctcggttcaactacaacaaaaagaaaaatgtggcagttgaacgtagacatgcaaag
catgagaaggaagaggcagatcgttaccaaatgttgatagaggagctaaaagcaagcaag
attcagttgcacctgttccttttatattataatgagaagtttatagaaaacatcaacgaa
gatctacaagccagcaataaagctgtaagtagtcagaaagtaagacaggttgcagcagaa
gaagaagtgagaacaaagaaaaaagagttgggcaaacttaacagagaactgcaacaaatt
gagaaggagataaaagttcatgactttaatctgaatgagaaacgacccagttatatcaaa
gccaaggagaacacaaggcactatgtgaagaaggtcgaagtagctaggaaatctctgaaa
agctgtgagaaacaatacagcattcatcagcaggcagtgaaagaactggagtttgagctg
gatgatgtgagtaaagtatggaaggcttttgaggaagaagcagtagcagaaatcagcagc
agaggtcgtagcatggaactggaggagagccagattcaacaatataaagaactgaagcaa
ttggtgagaaaacaggtgtcctcaatggcccaaacattggagaaactgcgacgtgagcaa
aaggctgatcgagacaagctggaactggatcaaagaaactataaagatttgcaaattcga
attaagcacacagaactggaaatagaagattatatcaaaagaatagaaaagctggaagaa
tatattaatacctgcaagtaagtaagtattgagcagcagcaagatcttataaaaccagtc
aatgaacagttgcgagaaattaaaggagcaaaaatgatgattgatgttgttcagtgtgta
tcacctcaactgaagaaagtgctacagtttgtttgtggcaatggactagtatgtgagacc
ttgaaagaagccaggcagattgcgtttgaaggagcagagaggcttaaaacggtggcgtta
gatggaacactcttcttaaaatctggtgtcatttctgggggttccagtgatctgaagttc
aaagccaggtgctgggacgagaagcagatcagtcaattgaaagaaatgaaggagaaactg
acaaatgaacttcgggagttaatgaaagtgaatcggaaggaagctgaattgaggcagttg
caggctcaagccaaagggacagaaactagaatgagatattccttcagtgatgtggagcaa
actagaaaaaaaaatctgacaaatagctatatggaaaaatcaaaactagaaagtggactg
gcaaatctgcaatccgaaatgaccgtggtgagtttgaatatcgaggatagacaggtgaaa
atgcagcagactcagaatcaaatgaatgaagttgaagatagagtgtttgaagacttttgt
accaagattggtgtggcaaatattcgggagtacgaggatgagcatgtgaagcagttagaa
gaaatagataagaaaagatcagaatttgagaaccagaaaacaaggctttcaatccaactt
gaatattcatatagccaatttgaagaagatataaaaaaaatccagaggtggaaggaaaca
attgagaaagatgaagaagaaatagtgaagttaaagaaggaggagatggagttaatgaaa
attgtagatgaagccttggtgatacagcaggatctcaataacagactattaattaaaaag
acacacgtcaaggatgcacaaaaggagcttgatgaagttaggaagaaattatctaatatc
agcagggaactagcaaaacttcagaaagaacatgtatgtttggaaacttcaatagaacaa
aaaagattggagaaacacaaccttctacttgcctgcaaagtccaagatgtacagattgaa
cttctgcaaggcaacctggaagaaattagtgaggttttaatggaagttgaaagtacccaa
gctgcaagagctgtctttgaactggaagctgcatttgaaataaactacaccggtttacca
acagatctcaaaggcctcacatctcttaaggacattgagatggaggagaacagattgaat
aagctattggaagaaaaggagacaattttacaaagaactgctgcaccaaatttaagagct
gttgaaaagctacaaaatacatgggataagtttcaagagtcattgtctgcatttgaaaca
agcagaaagaaagctagaatatgcagacaggattttgaatatgtcaaaagaagaagatac
gatttgtttaaccagtgctttgagcatgtctcagtgaaaattgatcagatctacaagatg
atgtgtcaaaataccagtgctcaggcatttctcagtccagagaactcagaagaaccttac
ttggatggtattggttacaactgtgtggctccagggaaacgattcatgcctatggataac
ttgtctggaggagaaaagtcagtagcagcattggcattgctttttgctattcacagctac
cggcctgcccctttctttgtgttggatgaagtcgatgctgctttggataacacaaatatt
ggaaaagttacaaattacatcagagatcaatccaggaagaacttccaaatgattgtcatc
tcattgaaagaggaattttattcaaaagccgatgcattacttggagtatatccagagcaa
ggagaatacatgtccagccaactgttaaccttcgaccttaccagttacccagaaaatact
agaagggaagagacactgcagccaaggcaggaagagtaa
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