Rhincodon typus (whale shark): 109937606
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Entry
109937606 CDS
T06055
Name
(RefSeq) interferon beta-like
KO
K05414
interferon alpha
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp04060
Cytokine-cytokine receptor interaction
rtp04217
Necroptosis
rtp04620
Toll-like receptor signaling pathway
rtp04621
NOD-like receptor signaling pathway
rtp04622
RIG-I-like receptor signaling pathway
rtp04623
Cytosolic DNA-sensing pathway
rtp05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
109937606
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
109937606
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
109937606
04621 NOD-like receptor signaling pathway
109937606
04622 RIG-I-like receptor signaling pathway
109937606
04623 Cytosolic DNA-sensing pathway
109937606
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
109937606
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
rtp04052
]
109937606
Cytokines and neuropeptides [BR:
rtp04052
]
Cytokines
Interferons
109937606
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Interferon
RuBisCO_activase_AAA_helical
Motif
Other DBs
NCBI-GeneID:
109937606
NCBI-ProteinID:
XP_020391693
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All DBs
Position
30:complement(9497100..9500902)
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AA seq
179 aa
AA seq
DB search
MALACTWQFVLPLFLLLGTLSQSYPIRLELHRRFTSEILEILDAMGGAFPVLCREQGMQI
KSLDLMEIAKNAKAEDKVMIFYQILRHTSKIYRTNVCSTMWDKNGLDEFAMLLFQQLKEL
RQDLGERQSGLKIFGRKRIRTYFRKLRTFLQNKGYNRCAWEMIRNESRKNLEEAISLLV
NT seq
540 nt
NT seq
+upstream
nt +downstream
nt
atggcgttggcttgtacttggcaatttgttcttccattgttcctgttgcttgggaccttg
agccagagctatccaataaggctggaactccaccgacgtttcaccagcgaaattttggaa
attctggatgcaatggggggcgcctttccagttctttgtcgagagcaggggatgcagatc
aaaagccttgatctgatggagattgcaaaaaatgcaaaggctgaggacaaagttatgatc
ttctatcaaatactgcgccataccagcaagatctacagaacaaatgtctgttccactatg
tgggacaagaatggattggatgaatttgcaatgcttttgtttcagcagctaaaggaactc
agacaggatttaggagaacgacagtcaggtttaaaaatttttgggagaaaaagaattcgt
acatatttccgaaaactgagaacatttctacaaaataaggggtacaatagatgtgcctgg
gaaatgatccgcaatgaaagcaggaaaaacttggaagaagccataagtctactggtgtaa
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integrated database retrieval system