Rubrobacter tropicus: GBA63_06825
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Entry
GBA63_06825 CDS
T06510
Name
(GenBank) helix-turn-helix domain-containing protein
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
rub
Rubrobacter tropicus
Pathway
rub03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rub00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
GBA63_06825
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rub03000
]
GBA63_06825
03400 DNA repair and recombination proteins [BR:
rub03400
]
GBA63_06825
Enzymes [BR:
rub01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
GBA63_06825
Transcription factors [BR:
rub03000
]
Prokaryotic type
Helix-turn-helix
AraC family
GBA63_06825
DNA repair and recombination proteins [BR:
rub03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
GBA63_06825
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AlkA_N
Ada_Zn_binding
HTH_18
HTH_AraC
HhH-GPD
Motif
Other DBs
NCBI-ProteinID:
QIN85063
UniProt:
A0A6G8QF35
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All DBs
Position
1423340..1424848
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AA seq
502 aa
AA seq
DB search
MIGDFDSRYRAVSSRDERFDGWFIVAVTSTGIYCRPSCPAVTPKRKNVRFYPTAGAAQYA
GFRACKRCLPDAVPGSPEWDVRADAAARAMRLISDGVVDREGVSGLAGRLGYTERHLHRL
LVAELGAGPLALARTRRAHTARLLLESTGLPITQVAFAAGFSSIRQFNETVRAVFAATPG
ELRRAGRRGGVSEGMERGEIHLRLPYREPLDIGGLLDFLGARAVPGIESYEGGVYRRTLR
LPHGAGTVALSAGEGRIRCVLRLEDLRDLGAAVQRCRRLLDLDADPVAVDGAFAADPILG
PLVAGRPGLRTPGGTDAEELAARAVLGQQVSVAGARTLAGRLVRNCGDGLPVSLQDPAET
LTHLFPEPAAIAEAGPDQSGLPGARHETLVSLAGSLERGEVLLDPGADRDEARRRLLSLR
GIGPWTASYVAMRALGEPDAFLPTDLGVRRALARLGHPGNPRGVEALAERWRPWRSYAVQ
HLWKSLGGAPKEKEARREETVA
NT seq
1509 nt
NT seq
+upstream
nt +downstream
nt
gtgatcggggacttcgacagcaggtacagggcggtcagcagccgcgacgagcgtttcgac
gggtggttcatagtggccgtgacttctaccgggatctactgccgcccgagctgcccggcc
gtcacgcccaagaggaagaacgtgcgcttctacccgaccgcaggcgccgcccagtacgcc
ggctttcgggcgtgcaagcgctgcctgccggacgccgtgcccggctcacccgagtgggac
gttcgggccgacgccgccgcgagggccatgcgcctcatctcggacggcgtcgtcgaccgc
gagggcgtctccggcctcgccggacgcctgggatacacggagcgccacctgcaccggctc
ctcgtggcggagctcggcgcggggccgctcgcgctggcccggacccgtcgggcccacacc
gcaaggctcttgctcgaatcgaccggcctgcccattactcaggtcgccttcgccgccggc
ttttcgagcatccggcagttcaacgagaccgtgcgggccgtctttgcggcgacgcccgga
gagcttcggagggcggggaggcgcggcggggtttcggagggtatggagcggggtgagatc
cacctccgactcccgtaccgcgaacctctggatatcggcggccttctggatttcctcggc
gcccgggccgtccccggcatagagtcgtacgaaggcggcgtctaccggcggaccctcagg
ctgccccacggcgccggaaccgtcgcgctttcggccggcgaggggcgcatcagatgcgtc
ctgcgcctcgaagatctgcgggacctcggcgcggcggtgcaacgctgcaggcggctcctc
gacctcgatgccgaccctgtggcggtcgacggggcttttgcggccgacccgattctgggg
ccgctcgtggccggacgccccggtcttcggacgcccggcggcaccgacgccgaagaactc
gcggcgagggccgtgctcggccagcaggtctccgtggcgggggcgaggaccctcgcgggc
aggctggtcaggaactgcggagacggcctgcctgtgagtttgcaggatcccgccgagacg
ctcacgcacctcttccccgaaccggccgccatcgcggaggccgggcccgatcaatcgggg
ctgccgggggccaggcacgagaccctggtgtctctggcgggcagcctggagcgtggggag
gtgctgctggacccgggcgcagaccgtgacgaggcccggcggcggctcctgtcgctgcgg
gggatcgggccgtggaccgcgtcatacgtcgcgatgcgggcgctcggggagcccgacgcg
ttcctgccgacggacctcggggtgcgcagggcgctcgcgcggctcggccatcccggcaac
ccccggggcgtggaagcgctggccgaacgctggcgtccctggcgctcctacgccgtgcag
cacctgtggaagagcctcggaggcgcccccaaagagaaagaagcacgtagagaggagacg
gtcgcatga
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