Roseimaritima ulvae: UC8_00220
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Entry
UC8_00220 CDS
T06179
Name
(GenBank) putative outer membrane protein pmp20 precursor
Organism
rul
Roseimaritima ulvae
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4347
Cadherin
PKD_4
Cadherin_4
Big_9
Cadherin_5
Cadherin_3
RibLong
Sde0182_C
PKD
BNR_4
Motif
Other DBs
NCBI-ProteinID:
QEG38069
UniProt:
A0A5B9QJ76
LinkDB
All DBs
Position
complement(31277..39808)
Genome browser
AA seq
2843 aa
AA seq
DB search
MATRSTTAPSKLSRRRLHSVQQRCSGWIDRARYLLEEALQTVPADDMGYDATALEDRILL
SATPIVQTVAESGLESAVDAPLTFAPETQAAITERRELVVIDAAATDYQQLIDDLGTQSD
RQLDVIVLDAQRDGIEQISEWLSEHDDVDAIHIVSHAEDGAVRLGSAWLSESNFAEYASQ
LSSWSGSLDGNADLLLYGCDLAASESGRELLQSLQGLIGADVAASDDATGHRFFGGDWEL
EYSTGVIESEIAFSSALQQTWRGKLASITISTTADVVDGDTSSIANLQATKGADASISLR
EAILAINAGAGGDTIQLGAGTYTLSITGASENLSATGDLDILKSLTIVGSGASDTVILGD
GLDRVLHVDGDSTILTASNLSIRGGMTTGNGGAIYLEDGTLNLDQIEITNNHAAFGAGIY
VNAGADGNFTDVVLSSNEATINGGGVFNGGAAILNRVTVSSNSADSGAGIYHDGTLALTN
VTVSGNTASASGGGLYARDSATIISTTFTLNHADSGGGIRKSSGVHSVTINNSIVSENTA
DSANPDVQGGFNSQGFNLIGDTTGGSGFGGTDITAMSANLGALTDNGGFSPTHALLTGSP
AIDAGTAAGAPTTDARGLARDSTPDIGAYEVYYELLATDEFRTNTNTGNTQETALEGRGS
HQAVAMDADGDYVVVWSSSNQDGSGWGIYAQRYDKDGVARGGELLVNSGDTAFDQKWATV
GMDAAGNFVVAWTDFGALGDRDIMARRFDADGNALSSVFQVNDGSIYNRSSPSIAVADDG
RFVIAWQGSAGLGDEDIFARRFDATGGALDGSDIVVEGAGGGDYDAVVAINNSGEFAVLW
DDGGGVKVQRFNANGTTNGGQITVDGSGNAGNGSLAMHSDGSLVVTWREGASGSQDVRIR
RYDNTGTAEGPSSSVATSTAGDQTDPSISMDGDGNYVVVWEGAGDQAGHSDTSGVFGQKF
DATGAKVGDEFRINQTTSGTQQMASAAMLNLDNFVTVWSGNGDQSNQTDSSGVFARQFGT
GTLPSGQLWFATKDDGDGGGETWTDSEILQFGDTGDAFDLNTGTTSGTISKLPGFITPYD
IRALHFVESTVTLGTTGTQFTVKQGDLIMTLDPGGGNTGTAGGISVDRMDIVVFRPDTPG
DYSSGTYSMLIDGDSGDPTSGVHDATKAYNVHAISLVERDTVVGGTTLTKGTLLVAHSDK
SLHHNIYTMDVIGTGVGASTETSEVELLLSGQALGLDGQPSDPYKLQGLHLLQQTTAFSG
NTLAAGTLMVVVEGPDTYAGQVVDQFDVVALTVTQTEQDTVAGTAATGTLLFDGTDLTIN
NPSGESLNGFTIVSSSFPDPNQTPTADAGGAYTIDEGVGLMLSAAGSSDPDGDTLSYKWD
LDNDGLFGEVGEPTGIGATVDWATLQSFGIDDSGSYTIGLQVDDGNGGTHSVTTTLTVND
VAPVLNISGAAAGTEDTVYSLALSATDPGDDTVTQWTVDWGDGTTTTHNFAAGTATHTYT
VGGNFSILVAATDEDGTHVQRDLLVAAYVTGQDDVYRFDAATGALVSTLSSSGGDLQKPI
HALVGKNGDIYVSGFDSDNVVRYDSAGNYLGEFVTSGSGGLNGACGMAFDADGNLYVTSF
NNNRILRYDASGNFVDVFGSGGSGMDGPSGIVFGPDGDLYVSSWDNSKLFKYDGTDGGSP
ISVIGSGLFGPDQLVFNSDGDLLIANGSSDNVKIYDGSLSTFASDMDNATGIALSPEGIL
YVANRDSDSITMFDATSGASLGTLVASGTGGLSNPYHLSWIPDHQVQIAHVADTPTVTDS
TTNQETQTTTGLVISRNPADTAAVTHYKITNIADGVLYLNDGSTQINNGDFITVAQGAAG
LKFTPTGGFAGPASFAVQASLTDNDGGLGGGIATANITVNAVANTAPSVSLDNVVSPINE
NTSTAGGLKVANIVITDDGNGLNTLGLSGADAAAFEIDGLELRLKSSVTLDYETKSSYDV
TVTVDDASIPGSPDDSASITILLQDVDEFDVGAIVDGNAAANTVAENAATGAAVGITAAA
SDADATNNTITYSLDDDAGGRFTIHSTTGVVTVDAALDAETATSHTIVVRATSSDTSTTT
KSFTINVADVNESNVSTIVDADGAANAVAENAAAGSAVGITASASDADVTNNTISYTLIN
DAAGRFTINATTGVVTVSGALDAEDDNEHTVVVRAFSSDGSFRTKAFQIDISDINESAIS
PIVDADGAANLVAENAAIGTVVGITTAAGDADVTDTVSYSLEDDAGGRFTINSSTGVVTV
AGTLDAEVAISHNIVVRATSSDSSTRTQSFGITIGDNNDNLPVFTSSGTVSITENRTIVQ
TLSATDADIPAQTISFTLSGGADAGRFTLNASNQLVFLVAPDFESPSDFNADNVYEVEVT
ADDGAGGSTTQSIAVTVTDGNEAPSITAVPDQTLNEDQPSGVLTFTIGDLESAATGLSVT
ASSSNPAVIRNAGITLGGSGANRTIMVAPVANQSGASVITITVSDGTLTTDTSFVVTVNS
VNDVAVGRNDRILVLDDAVTFTAADLMANDYDVDGDALTLHIVSAPEHGTLTDLGGGRFA
YQADGDGDTFMTYRLFDGTVYSDPVTVRFSVPQIPVTPAALPPSYDAPAETSSEPSEPQE
EPAPVEPQEETPEEEPTVSELPVVPNAPPQTGRPAAIDVAAGPPAGLHDGSQGFTWTLRS
DHIVEAVVEVTERVLGEGAVSDNREEIRAAYATAVAQIRDAITQPQMWQAIDSMQEQIDS
SVSTTTLTIGATVTATTSITVGYVVWVIRGGILLSSVMANLPMWRLMDPMAILNAVDGAE
EDDESLESMVDEHPSTEPVGADA
NT seq
8532 nt
NT seq
+upstream
nt +downstream
nt
atggcaactcgatcgacgaccgccccttccaaactgtctcgccgccgtttgcactcggtg
caacaacgatgcagtggttggatcgatcgtgcgcggtacttgctggaagaagccctgcag
acagttcctgcggatgatatgggttatgacgcgacggccttggaagaccgcatcctgctg
agcgccacaccgatcgtgcaaaccgtcgccgaaagcggcttggaatcggccgtggatgcg
ccgctgacgtttgcacccgagacgcaagccgcgatcaccgagcgccgagaattggtcgta
atcgacgccgcggccaccgactatcagcagctcattgacgatcttggcacccaatctgat
cgccagctggacgtgatcgtgctcgatgcgcagcgcgatggcatcgaacagattagcgag
tggttgagcgaacacgacgacgtagatgccatccacatcgtctcgcacgccgaagacggc
gcagtacgactgggcagcgcttggctgagcgaatcaaattttgcggaatacgcttcgcaa
ctgtccagttggagtgggtccctcgatggcaacgccgatctgttgctatacggctgcgac
ttggcggcatcggaatcgggacgggaactgctgcagtcgttgcagggcttaataggagcc
gacgtggcagccagtgacgatgcgaccggacaccgttttttcggcggtgactgggaacta
gagtattcaaccggtgtgattgagtccgagattgcgttcagctcggctttgcaacaaacc
tggcgaggcaaactggcttccataacaatcagtacgacggctgacgttgtcgatggagat
acgtcttcgatcgctaacctgcaggcaaccaaaggcgccgacgcttcgatctccttacgt
gaagcgattctggcgatcaacgcaggtgccggtggtgatacgatccaattgggtgctggc
acgtacacgctttcaatcaccggagccagcgagaatctgtcggcaaccggtgacttagac
attctgaaaagtctaaccattgtcggtagcggcgctagcgataccgtgatccttggtgat
ggacttgatcgcgtcctgcatgtcgacggggactcaaccatattaaccgcgtcaaatctt
tcgattcgcggaggcatgacaaccgggaacggcggtgccatctaccttgaagacggcacg
ctgaatctcgatcagattgagattacgaataatcatgccgctttcggagctgggatctat
gtcaatgccggtgcagatggaaatttcaccgatgtggtattgagcagcaacgaggcaacc
atcaacggcggaggcgtcttcaacggcggtgcagcgatcctcaatcgcgtcacggtgagc
agcaacagcgcggattctggggcggggatttatcatgatgggacactcgctctaacgaac
gtgaccgtcagtgggaacacggcttcggcgagtggtggtggtttgtacgcccgcgattcg
gccaccattatcagcactacgtttacgctaaatcatgccgatagtggtggcggtatccgc
aagtcgtctggagtgcatagcgtcacaatcaataactcgattgtcagcgaaaacacagcc
gacagcgccaatcccgatgttcagggcgggttcaatagccagggctttaacctgatcggg
gacacgaccggcggcagcggattcgggggcactgacattaccgccatgagcgccaacctt
ggggcccttacggacaatggtggattctcgccaacacatgcgttgctgaccggcagtccc
gcgatcgatgccggcacggcggcgggcgcccccacaacggatgcccgcggcctcgcccgt
gattcgacgccggatatcggtgcctacgaagtctattacgaactgctcgccaccgacgaa
ttccgcacgaatacaaacaccggcaacactcaagaaaccgcgttggaaggtcgtggcagc
catcaagccgtggcgatggacgccgatggggactatgtggtggtgtggtcgtcgtccaac
caggacggatccggctggggcatctatgcgcagcggtacgacaaagacggtgtggcgcgt
ggcggtgagctgctggtcaatagtggcgatacggcctttgatcaaaaatgggcgaccgtg
ggcatggacgcggcggggaactttgtcgtcgcctggacggacttcggcgcgttgggagac
cgcgatattatggctcggcgattcgacgccgacggcaacgcgttgagcagcgttttccaa
gtcaacgacggctcgatctataaccgcagcagtccctccattgcggtcgccgacgacggt
cgatttgtgatcgcttggcagggcagcgcaggactgggcgatgaggatatcttcgcgcgg
cgatttgatgccacgggaggcgctttggacggcagcgatatagtggtggaaggcgcaggc
ggcggtgactatgacgccgtcgtggcgatcaacaatagcggcgaatttgccgtgttatgg
gacgacggcggcggcgtgaaagtccaacgctttaacgccaacgggaccaccaacgggggt
cagatcacggtcgatggcagcggcaatgccggcaatggttcgctggccatgcacagcgac
ggttcgctggtggtgacatggcgcgagggtgcctcgggttcgcaggatgtccgcattcgt
cgctacgacaacaccggcaccgccgaggggccgagcagctcggtcgccacgtccaccgct
ggggatcaaaccgatccctcgatctcgatggacggtgatggcaactacgtcgtcgtctgg
gaaggcgccggagatcaggcgggccacagcgacacatccggcgtgttcggccaaaaattt
gatgccaccggagccaaagtgggcgacgagttccggatcaaccaaaccaccagtggtacg
cagcagatggcctcggcggcgatgctgaacctggacaacttcgtcaccgtgtggagcggc
aacggcgaccagagcaatcagaccgattcctccggcgtgtttgcccgccagttcggcacc
ggtacgctgcccagcggccaactgtggttcgccaccaaggacgatggcgatggtggcggc
gaaacctggaccgacagcgaaattctgcagttcggggacacgggcgatgcgttcgacctg
aacaccggaaccacaagcggcacgatatccaagctgccaggatttattacaccgtacgac
atacgggccctgcacttcgtcgaaagcaccgtcacgttgggtacgaccggcacccagttc
accgtgaaacaaggcgacctgatcatgacgctcgaccccggcggtggtaacacgggaacc
gccggcggcatctcggtcgatcgcatggacatcgtcgtatttcgacccgacacaccgggt
gactacagcagcgggacctactcgatgctgattgacggcgattcgggcgaccccaccagc
ggcgttcacgatgctaccaaggcttataacgttcacgccatttccttggtcgaacgcgac
acggtggtcggcggcacaacgttgaccaagggcaccctgttggtggctcattccgacaaa
tccctgcatcacaacatctacaccatggacgtgatcggcacgggagtgggagcgtcgacg
gaaacctccgaagtcgaattgttgttgtccggccaagccttgggattggatggtcaaccc
agcgatccctataagctgcaaggtctgcacctgctccaacaaacgaccgccttcagcggc
aacacgttggcggccgggacgctgatggttgtggtcgaaggccctgatacgtacgccggc
caagtcgtcgaccaattcgatgtcgtggcgctgacggtgacgcaaaccgaacaggatacg
gtcgccggcaccgccgccacgggaacgctgctgtttgacggcaccgacctgacgatcaac
aacccttctggtgaatctttaaacggttttacgatcgtcagttccagttttccagatccc
aatcaaacccctacggcggacgccggcggagcgtacacgatcgatgaaggcgttggccta
atgctgtcggctgccgggtccagcgaccccgatggcgatacgttgagctacaaatgggac
ctggacaatgacgggctgttcggcgaggtcggcgagccaaccgggatcggggccacggtc
gactgggcgacgctgcaaagctttggcatcgacgacagcggcagctacaccatcggcttg
caagtcgacgacggcaacggtggcacccatagcgtgactaccacgctgacggttaacgat
gtggcccccgtgctaaatatcagcggggctgcagccggtaccgaagacacggtctattca
ctggcactatcggccaccgaccccggcgatgatactgtcacgcagtggacggtggactgg
ggcgacggcaccacgacgacccacaactttgccgccgggaccgccacgcatacctacact
gtcggtggcaacttcagcatcctggtcgccgccaccgacgaagatggcacgcatgtccag
cgagatctgttggtggccgcctacgtaaccggacaagacgacgtctatcgctttgacgcc
gcgacaggagcattggtatcaaccctgagtagctcgggcggcgatttgcaaaaacccatt
cacgctttggtgggaaaaaatggcgacatctatgtcagcggatttgattctgacaacgtc
gtccgctacgactccgccggcaactacttgggcgaatttgtcacctctggttcgggcggt
ttaaatggggcctgcggaatggcttttgacgccgatgggaatctgtacgttaccagtttt
aataacaacagaatcctccgctacgatgccagcgggaactttgtcgacgtgtttggcagc
ggtggatcaggcatggacggaccttcggggatcgtatttggccccgatggcgacctgtac
gtctcgtcatgggacaacagcaaactctttaaatatgacggtactgatggcggcagtccg
atcagcgttatcggcagcggactgttcggtcccgaccaattggtcttcaacagcgatgga
gatctgttgatcgccaacggcagcagcgacaatgtcaaaatctacgacggcagtctgtcg
actttcgcctcggacatggacaacgccacgggaatcgccctgtctcccgagggcattctg
tacgttgccaaccgcgactccgacagcatcaccatgtttgatgccaccagcggcgcctcg
ctgggcaccttggtcgccagcggcaccggaggtctaagtaacccgtaccacctcagctgg
atccccgatcatcaggtgcaaatcgcccacgtggctgatacgcccacggtcaccgacagt
accaccaatcaggaaacgcaaaccacaaccggattggtgatcagccgcaacccggccgac
accgccgcggtaacgcactacaaaatcaccaacatcgccgatggggtgctgtacctgaac
gacggcagtacccagatcaacaatggggatttcatcaccgtcgcccagggagccgcaggc
ttgaaattcacgcccactggcggttttgcagggccggccagttttgctgtccaggcatcc
ctgaccgacaacgacggcggactgggtggcggcatcgccacggcgaatatcacggtcaac
gccgtcgccaacacggcgccaagcgtttcgctcgataatgtggtctcgccgatcaatgaa
aacaccagtaccgccggcggtttaaaggtggccaacatcgtgatcaccgacgatggcaac
ggcctcaacacgctgggcctgagcggtgcggatgcggcggccttcgaaatcgacggtttg
gaattaaggctcaaaagttcggtgacgctggactacgaaacaaaatcttcctatgacgtc
acggtcaccgtcgatgacgccagtatccccggcagtcccgacgactcggcttcgatcacc
atcctgttgcaggacgtcgacgaatttgatgttggtgcgatcgtcgacggcaacgccgcg
gccaacaccgtggccgaaaacgcggcgaccggtgccgcagtgggcatcaccgccgcagcc
agcgatgccgatgcgaccaacaacacgatcacgtattcgctggacgatgacgccggcgga
cgctttacgattcacagcaccaccggcgtggtcaccgtggacgcagcgctcgacgcggaa
acggccaccagccacacgatcgtggtgcgtgccaccagcagcgacacctcgaccaccaca
aagtccttcacgatcaacgtcgccgacgtgaacgaatcgaacgtcagcacgatcgtcgat
gccgatggcgctgccaatgcggtggccgaaaacgcggcggccggatccgcagtgggtatc
accgcttcggccagtgacgccgacgttaccaacaacacgatcagttacacactcatcaat
gatgctgcgggtaggttcacgatcaatgccacgacgggcgtcgtgacggtctccggcgcg
ttggacgcagaagacgacaacgaacataccgtggtggtccgggctttcagcagtgatggt
tcgttcagaacaaaagcatttcagatcgacattagcgatatcaacgaatcggccatcagt
ccgatcgtcgatgccgatggcgctgccaatttggtagctgaaaacgcggcgatcgggacc
gtggtcgggattacgactgccgccggcgacgccgacgtaaccgatacggtcagttattcg
ctggaagatgatgcgggcggacggtttacgattaacagcagcaccggcgtggtgacggtt
gccggaaccctggatgcggaagtcgccatcagccacaacatcgtggttcgcgccaccagc
agcgacagttcgacccgcacccaatcattcgggatcaccatcggtgataacaacgacaat
ctgccggtgttcacctccagcggcactgtgtcgatcaccgagaatcggacgatcgtgcaa
acgttgtcggcaaccgacgccgatattccggctcaaacgatttcgttcacgctcagcgga
ggtgccgacgccggccgctttacgctcaacgcttcaaatcagttggtctttctcgtcgca
cccgattttgagtcgcccagcgacttcaatgcggataatgtttacgaagtcgaagtcacg
gccgatgacggtgccggtggatcgaccacccaaagcattgcggtcacggtgaccgatggc
aacgaagctccctcgatcaccgcggtgccggaccagacattaaacgaagaccaacccagc
ggcgtgttgacgtttacgatcggagacttggaatccgccgcgacgggattgtcggtcacc
gcctcttccagcaatccagccgtgattcgcaatgcgggcatcacgctgggcggcagcggt
gccaatcgcacgatcatggtggcgccggtggccaaccaatccggagccagcgtgattacg
atcaccgtcagcgatggcacgctgaccacggacacttcgtttgtggtcaccgtgaacagt
gtcaatgatgtggcggtgggtcgaaacgaccgcatcttggtgctggacgacgcggtcacg
tttaccgcagccgatttgatggccaacgactatgacgtggacggggatgccttgacgctg
catatcgtcagtgccccggaacacggcacgctgaccgatctgggtggcggcaggtttgca
taccaagccgatggggacggcgacaccttcatgacttaccgcctgttcgacggcaccgtt
tatagcgatccggtaaccgtgcgattcagtgtaccccagatccccgtcactccggctgcc
ctgccaccgagctacgatgcaccggcggaaacgtcttccgaacccagcgaaccgcaggag
gaacccgctccggttgaaccgcaggaggaaacaccggaagaggaaccgaccgtcagcgag
ctgcccgtggtgcccaacgcaccgccgcaaaccggccgacccgccgcgatcgacgtggcg
gcggggccgcccgccgggctgcacgatggctcgcagggctttacctggacgctccgctcg
gaccacatagtcgaagcggtcgtcgaagtcaccgagcgagtgttgggcgaaggtgcggtg
tcggacaaccgagaagaaatcagagccgcttacgccaccgccgtggctcaaatccgcgat
gccatcactcagccgcagatgtggcaggctatcgattcgatgcaggaacaaatcgattcc
tcggtgtccaccacgaccttgacgattggggcgaccgtaacggccacgaccagcattacc
gtggggtatgtggtgtgggtgatccgaggtgggattttacttagcagtgtgatggccaat
ctgccgatgtggcgtttaatggaccccatggcgatcctgaatgccgtggatggagccgag
gaagacgacgaatccctcgaatcgatggtcgacgaacatccgtcaaccgagccggtgggg
gcggacgcttag
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