Ruminococcus bicirculans (ex Wegman et al. 2014): RBI_I01363
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Entry
RBI_I01363 CDS
T03158
Symbol
rnc
Name
(GenBank) ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
rus
Ruminococcus bicirculans (ex Wegman et al. 2014)
Brite
KEGG Orthology (KO) [BR:
rus00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rus03019
]
RBI_I01363 (rnc)
03009 Ribosome biogenesis [BR:
rus03009
]
RBI_I01363 (rnc)
03036 Chromosome and associated proteins [BR:
rus03036
]
RBI_I01363 (rnc)
Enzymes [BR:
rus01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
RBI_I01363 (rnc)
Messenger RNA biogenesis [BR:
rus03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
RBI_I01363 (rnc)
Ribosome biogenesis [BR:
rus03009
]
Eukaryotic type
90S particles
RNase
RBI_I01363 (rnc)
Prokaryotic type
rRNA processing factors
RBI_I01363 (rnc)
Chromosome and associated proteins [BR:
rus03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
RBI_I01363 (rnc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
DND1_DSRM
Lact_bio_phlase
Dicer_dsRBD
Motif
Other DBs
NCBI-ProteinID:
CCO05075
UniProt:
W0U5N2
LinkDB
All DBs
Position
I:1524217..1524915
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AA seq
232 aa
AA seq
DB search
MDEQKALKEFQERIGYQFKDEKLLYEALSHSSFANENKKARNSNERLEFLGDSVLSIVVS
DHIFEHYKHMPEGELTKMRASLVCEKALFEFSKKIELGKYIFLGKGEEITGGRERPSIIS
DAFEAVIAAIYLDGGIEPVSKYILSFIPENITPDGVVFHDYKTILQEIIQKNPEERIEYH
LKGESGPDHNKKFTVQVLLNTNVIGEGTGRSKKTAEQLAAKEALELMGYGAQ
NT seq
699 nt
NT seq
+upstream
nt +downstream
nt
atggacgagcaaaaggctcttaaagagtttcaggaaagaataggttatcaattcaaagac
gaaaagctcctttacgaagctctttcccattcatcatttgcaaatgaaaacaagaaggca
agaaacagcaatgaaaggcttgaatttcttggagattcagtgctttctatagttgtgtca
gatcacattttcgagcattacaagcatatgcctgagggcgagctgacaaaaatgagagct
tcacttgtgtgcgaaaaagcactgtttgagttctcaaagaaaatagaacttggaaagtat
attttccttggaaaaggcgaagagataacaggcggcagagaaagaccgtcaattatttca
gacgcttttgaagcagttatcgctgcaatttatcttgacggtggtatcgagcctgtttca
aaatatatactttcattcatacctgaaaatatcacgcctgatggagttgttttccatgat
tacaagactattcttcaggagataatccagaaaaatcctgaggagagaatagaatatcac
cttaaaggcgagtcaggtcctgaccataataagaaatttactgttcaggtacttttgaat
acgaatgttatcggcgagggtacaggcagatcgaaaaagaccgctgaacagttggcggct
aaagaagcattggaactaatgggctatggggcacagtaa
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