Ruegeria sp. THAF33: FIU92_11485
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Entry
FIU92_11485 CDS
T06269
Symbol
cfiB
Name
(GenBank) 2-oxoglutarate carboxylase small subunit
KO
K01958
pyruvate carboxylase [EC:
6.4.1.1
]
Organism
rut
Ruegeria sp. THAF33
Pathway
rut00020
Citrate cycle (TCA cycle)
rut00620
Pyruvate metabolism
rut01100
Metabolic pathways
rut01120
Microbial metabolism in diverse environments
rut01200
Carbon metabolism
rut01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
rut00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
FIU92_11485 (cfiB)
00620 Pyruvate metabolism
FIU92_11485 (cfiB)
Enzymes [BR:
rut01000
]
6. Ligases
6.4 Forming carbon-carbon bonds
6.4.1 Ligases that form carbon-carbon bonds (only sub-subclass identified to date)
6.4.1.1 pyruvate carboxylase
FIU92_11485 (cfiB)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PYC_OADA
CPSase_L_D2
Biotin_carb_N
Biotin_carb_C
HMGL-like
Biotin_lipoyl
Biotin_lipoyl_2
ATP-grasp
Dala_Dala_lig_C
HlyD_3
ATP-grasp_3
HlyD_D23
ATPgrasp_Ter
Motif
Other DBs
NCBI-ProteinID:
QFT73656
UniProt:
A0A5P9GDG1
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All DBs
Position
2280291..2283728
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AA seq
1145 aa
AA seq
DB search
MTDFNKILIANRGEIAIRVMRAANEMGKRTVAVYAEEDKLGLHRFKADEAYQIGEGMGPV
AAYLSIDEIIRVAKQCGADAIHPGYGLLSENPDFVDACVKNGITFIGPTAETMRALGDKA
SARRVAIEAGVPVIPATEVLGDDMDAIRKEAAEIGYPLMLKASWGGGGRGMRPIQSEEEL
EEKVLEGRREAEAAFGNGEGYLEKMIIRARHVEVQILGDKHGEIYHLYERDCSVQRRNQK
VVERAPAPYLSDEQRAEICELGRRICAHVNYECAGTVEFLMDMDTGKFYFIEVNPRVQVE
HTVTEEVTGIDIVQAQILIAEGKTLAEATGMASQKDIQLNGHALQTRITTEDPQNNFIPD
YGRITAYRSATGMGIRLDGGTAYAGGVITRYYDSLLTKVTAWAPTPEKAISRMDRALREF
RIRGVSTNIDFVINLLKHPTFLSNEYTTKFIDTTPELFTFKKRRDRGTKVLTYIADITVN
GHPETKDRPRPRADLKEARPPALKAEPQMGTRNLLEQKGPQAVADWMKAQRQLLITDTTM
RDGHQSLLATRMRSIDMIKVAPSYAANLPQLFSVECWGGATFDVAYRFLQECPWQRLRDL
REAMPNLMTQMLLRGANGVGYTNYPDNVVQEFVRQAATGIDVFRVFDSLNWVENMRVAMD
AVVDSGKICEGTVCYTGDILDPDRAKYDLKYYVGMAKELRDAGAHILGLKDMAGLLKPAA
AKILIRALKEEVGLPIHFHTHDTAGIASATILAASEAGVDAVDCAMDSFSGNTSQATLGT
VVEALRHTDRDTGLDIKAIREISDYFEAVRGQYAAFESSLQAPASEVYLHEMPGGQFTNL
KAQARSLGLEERWHEVAQMYADVNQMFGDIVKVTPSSKVVGDMALMMVSQNMTREQVEDP
NTDVAFPDSVVDMMRGNLGQPPGGFPETIIKKVLKDEVPNTQRPGKDVPPVDLEATRAEL
SKQLEGKEVDDEDLNGYLMYPKVFLDYMGRHRIYGPVRTLPTRTFFYGMEPGEEITAEID
PGKTLEIRCQAIGETDEKGEVKVFFELNGQPRVIRVPNRLVTSTTQARPKAEVGNPDHVG
APMPGVVATVAVTAGQQVKEGDMLLTIEAMKMETGIHAERDATVKAVHVQPGGQIDAKDL
LVELE
NT seq
3438 nt
NT seq
+upstream
nt +downstream
nt
atgacagacttcaacaagatcctgatcgccaaccgcggcgagattgccatccgcgtcatg
cgcgcagcaaacgagatgggaaaacgaaccgtcgccgtctacgctgaagaagacaaactg
ggcctgcaccggttcaaggcggacgaggcgtatcagatcggtgaaggcatggggccggtt
gccgcgtatctttcgatcgacgagatcatccgtgttgccaagcaatgtggcgccgacgcg
attcatccgggatatggcctgctgtccgagaacccggatttcgtcgatgcctgcgtcaag
aacggcatcaccttcatcggccccacggcggaaaccatgcgcgcgcttggcgacaaggcc
agcgcgcgacgcgtagccatcgaagcaggcgttccggtcattcccgccaccgaagttctg
ggcgatgacatggacgcgatccgcaaggaggccgccgaaatcggctatccgctgatgctc
aaggcgtcttggggcggcggcgggcgcggcatgcgcccgatccagtcggaagaagagctg
gaagagaaagtgctggaaggccgtcgcgaggccgaagccgcattcggcaatggcgagggt
tatctggaaaagatgatcattcgtgcgcgccatgtcgaggtgcagatcctgggcgacaag
catggtgaaatctatcacctgtatgaacgcgactgctcggtccagcgccggaaccagaaa
gtcgtggaacgcgcccctgccccgtatctgagcgacgaacagcgcgccgagatctgcgag
cttggccgcaggatctgtgcgcatgtcaattacgaatgtgccggcacggtcgagttcctg
atggatatggacaccggcaagttctatttcatcgaagtcaatccgcgcgtacaggtcgaa
cacaccgtgaccgaagaagtcaccggtatcgacatcgtgcaggcgcagatcctgatcgcc
gagggcaagacgctggccgaggcgacgggcatggccagccaaaaggatatccagctcaac
ggccacgcgttgcagacacggatcaccaccgaggacccacagaacaacttcatccccgat
tatggccggatcaccgcctatcgctcggccaccggtatgggcatccgtctggatggcggc
acggcctatgcgggcggggtgattacgcgctattacgactcgctgctgaccaaggttacg
gcctgggcccccacgcccgaaaaggcgatatcccggatggatcgcgccctgcgcgagttc
cgcatccgcggggtttcgacgaatatcgacttcgtcatcaacctgctgaagcatccgacc
ttcttgtcgaacgaatacaccaccaagttcatcgacacgacgcccgaactgttcaccttc
aagaagcggcgcgaccgcggcaccaaggttctgacctatatcgcggacatcaccgtgaac
gggcatcccgaaaccaaggaccgcccgcgcccgcgcgccgacctgaaagaggccaggcct
ccggcgctgaaggccgaaccgcagatgggtacgcgcaacctgctggagcagaagggcccg
caggcggtggccgactggatgaaggcacagcgccaactgctgatcaccgacaccaccatg
cgcgacgggcaccagtctctgctggcgacccggatgcgctcgatcgacatgatcaaggtg
gctccctcctatgcagcgaacttgccgcagctgttctcggtcgaatgctggggcggcgcg
actttcgacgtggcgtatcggttcttgcaggaatgcccgtggcagcgcctgcgggacctg
cgcgaggcgatgccgaacctgatgacccagatgctgctgcgcggcgcaaacggcgtgggc
tatacgaactatcctgacaacgtggtgcaggagttcgtgcgtcaggcggcgacaggaatt
gacgtgttccgcgtcttcgactcgctgaactgggtcgaaaacatgcgcgtggcgatggat
gcggtcgtcgatagcggcaagatttgcgaaggtaccgtctgttacactggcgatattctt
gacccggatcgcgccaagtatgacctgaaatactatgtcggcatggcgaaagaactacgt
gacgccggcgcgcatattctgggccttaaggacatggcgggcctgctgaaaccggccgcg
gccaagatcctgatccgtgcgctgaaagaagaggtagggctaccgatacacttccacacc
catgacactgccggtattgccagtgcgaccattctggccgcgtccgaggcgggtgtggat
gcagttgactgcgcgatggacagcttctcgggcaacaccagccaggcgacgctgggtacg
gttgtcgaggcgctgcgccataccgaccgcgacaccgggctggacatcaaggccattcgt
gaaatcagcgattacttcgaggctgtgcgtggccagtatgcggccttcgaatccagcctt
caggcccctgcgtccgaggtctatctgcacgagatgccgggcggtcagttcaccaacctc
aaggcacaggcacgcagcctgggtctggaagaacgctggcacgaagtggcccagatgtat
gctgacgtgaaccagatgttcggtgatatcgtgaaggtcacgccgtcttccaaggtcgtt
ggtgacatggcgctgatgatggtcagccagaacatgacacgtgaacaggtcgaggacccg
aataccgacgtggccttccccgattcggtcgtggacatgatgcgcggcaatctgggtcag
cctccgggcggtttccccgagaccatcatcaagaaggtgctgaaagacgaggttcccaac
acgcagcgacccggcaaggacgtgcccccggtcgatcttgaagccacccgcgccgagctg
tccaagcagctggaaggcaaagaggtcgatgacgaggatctgaacggctatctgatgtat
cccaaggtgttcctggactacatgggtcgccaccggatctacggcccggttcgtaccctg
ccaacgcgcaccttcttctacggcatggagccgggcgaagagatcaccgcggaaatcgac
cccggcaagacgctggaaatccggtgtcaggccatcggcgaaacggatgaaaagggcgag
gtcaaagtgttctttgaactcaacggccaaccgcgcgtgatccgggttccgaaccggctg
gtcacctcgaccacgcaggcgcggcccaaggccgaggtcggcaacccggatcatgtcggt
gcgccgatgcccggtgttgttgccaccgtcgccgtaacagcgggccagcaggtcaaggaa
ggcgacatgttgctgaccatcgaggcgatgaagatggaaaccggcatccacgccgagcgc
gatgcgaccgtcaaggccgttcatgtgcagcccggtggccagattgacgcaaaggacctt
ctggtcgagctggaataa
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