Ruegeria sp. THAF33: FIU92_12055
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Entry
FIU92_12055 CDS
T06269
Symbol
ddpC
Name
(GenBank) putative D,D-dipeptide transport system permease protein DdpC
KO
K02034
peptide/nickel transport system permease protein
Organism
rut
Ruegeria sp. THAF33
Pathway
rut02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
rut00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
FIU92_12055 (ddpC)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rut02000
]
FIU92_12055 (ddpC)
Transporters [BR:
rut02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
FIU92_12055 (ddpC)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BPD_transp_1
OppC_N
Motif
Other DBs
NCBI-ProteinID:
QFT73766
UniProt:
A0A5P9GDR4
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Position
2383807..2384622
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AA seq
271 aa
AA seq
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MKNIPISALIGLIFTGAYFFVAIAAPLIAPYGMAEVVGDVWEPASAEHLLGTDNIGRDLL
TRMIYGGRTTIFIAAAATLLSFLTGTSLGLLAAVLGGWADQALSRTVDLIMSIPTLILAL
VILAIVPVTVPILILVMGLLDATRPYRLSRSVAVDINVMDYVEAAKLRGEGRTWIIFREI
LPNALSPLVAEFGLRFIFMVLFISTLSFLGLGVQPPLADWGGIVKENKDGIVYGIGAALY
PAVAIATLAISVNLVADWILNRTTSLKGGRG
NT seq
816 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaacatccctatttcggctctgattggcctcatattcaccggcgcctatttcttc
gtggccattgctgccccgttgatcgcgccttacgggatggcagaagtggtcggcgatgta
tgggagccggccagcgccgaacacctgctgggcaccgacaatatcggccgtgacctgctg
acccgcatgatctatggcggtcgcaccacgatcttcattgccgccgcagcgacattgctc
agcttcttgaccggtacatcgcttggtcttctggccgccgttctgggcggttgggcggat
caggcgcttagccggacggtcgatctgatcatgtcgatccctacgctgatccttgcgctg
gtcattctggccatcgttccggtcactgttccgatcctgatccttgtcatggggcttttg
gatgcgacacgcccttatcgcctttcgcgctccgtcgccgtggatatcaacgtgatggac
tatgtcgaagccgccaaattgcgtggtgaggggcggacatggatcatcttccgggaaatc
ctgccgaatgcattgtcaccgctggtggccgagttcggcctgcggttcattttcatggtg
ctgttcatctctaccctgtccttcctgggtctcggcgttcaaccgccgctggccgactgg
ggtggcatcgtgaaggaaaacaaggacggcatcgtgtatggcattggcgcggccctgtac
cccgcggtggccatcgcgacgctcgcgatctcggtcaatcttgtggccgactggatcctc
aaccgtactacatcgctgaaaggaggtcggggatga
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