Rhodomicrobium vannielii: Rvan_1913
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Entry
Rvan_1913 CDS
T01353
Name
(GenBank) RNA polymerase, sigma 32 subunit, RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
rva
Rhodomicrobium vannielii
Brite
KEGG Orthology (KO) [BR:
rva00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rva03021
]
Rvan_1913
Transcription machinery [BR:
rva03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Rvan_1913
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
HTH_19
Sigma70_r4_2
HTH_11
GntR
DUF3431
Motif
Other DBs
NCBI-ProteinID:
ADP71149
UniProt:
E3I0Q9
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All DBs
Position
2094528..2095454
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AA seq
308 aa
AA seq
DB search
MSSLPSVAASGGLARYLEEIRRFPMLEPQQEYMLAKRWQEHEDAKAAQKLVTSHLRLVAR
IAMGYRGYGLPIGEVISEGNVGLMQAVKRFDPDKGFRLATYAMWWIRAAIQEYILRSWSL
VKMGTTASQKKLFFNLRKAKSQLQALEEGDLRPDQVKTIATNLGVPEEDVVSMNRRLGGD
ASLNAPLRADSESGEWQDWLVDEGPNQETQLAESEELSRRREYLGAAMDSLNERERRIFT
ARRLADDPLTLEELSSEFNVSRERIRQIEVRAFEKVQKAVQKAALKAEAPRSPVSGGGMP
AFSASAAQ
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atgagttcattgccgtcagtcgctgcaagtggtggcctcgcccgctatctcgaagagatt
cggcgtttcccgatgcttgagcctcagcaagaatacatgctcgccaaacgttggcaagag
cacgaagacgccaaggccgcgcagaagctcgttacgtcgcaccttcgccttgtggcgcgc
atcgccatgggctatcgaggctacggattgcccatcggtgaggtcatctccgaaggcaat
gtcgggctgatgcaggccgtcaagcgcttcgatccagacaagggcttccgccttgccacc
tacgctatgtggtggatacgcgctgccattcaagaatatattctgcgctcgtggagcctc
gtgaagatgggcaccacggcgagccagaagaagcttttcttcaacctgcgcaaggcgaag
agccagttgcaagcgctggaggaaggagatcttcgtcccgatcaggtcaagaccatcgcg
actaacctcggcgtgccggaagaggacgtcgtgtcgatgaatcgccgtcttggtggcgac
gcttcgctcaacgctccgctgcgcgccgactctgaaagcggcgagtggcaggattggctc
gtggacgagggtccgaatcaggagacgcaactcgccgaaagcgaggagttgagccgccgc
cgcgaatatctcggagcggcgatggatagtctgaacgagcgcgaacgccgcatcttcaca
gcgcgtcgcctcgccgacgatccgctcacacttgaagagctttcgtccgagttcaacgtg
agccgcgagcgcatccggcagatcgaggtgcgcgcgttcgaaaaggtgcagaaggcggtg
caaaaggctgccctcaaggccgaagcaccgcgcagcccggtttccggcggcggtatgcca
gcgttctcggcttccgctgcacaataa
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integrated database retrieval system
