Rhodomicrobium vannielii: Rvan_3030
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Entry
Rvan_3030 CDS
T01353
Name
(GenBank) A/G-specific adenine glycosylase
KO
K03575
A/G-specific adenine glycosylase [EC:
3.2.2.31
]
Organism
rva
Rhodomicrobium vannielii
Pathway
rva03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rva00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Rvan_3030
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rva03400
]
Rvan_3030
Enzymes [BR:
rva01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.31 adenine glycosylase
Rvan_3030
DNA repair and recombination proteins [BR:
rva03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Rvan_3030
Prokaryotic type
Rvan_3030
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
NUDIX_4
HHH
EndIII_4Fe-2S
Motif
Other DBs
NCBI-ProteinID:
ADP72234
UniProt:
E3I0B6
LinkDB
All DBs
Position
3298148..3299320
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AA seq
390 aa
AA seq
DB search
MPLFGVRLMQKRHSARPAFAAESFQRALLRWYDVARRDLPWRAKPGELADPYRVWLSEIM
LQQTTVKAVIPYFEAFTRRWPTVDALADASRDEVLAAWAGLGYYSRARNLHACAQALAQG
GFPADEVGLRALPGVGAYTSAAIAAIAFDLPAAVVDGNVERVLARVFALETPLPAAKGEL
RKLAAELTPASRPGDYAQAMMDLGAGICSPRSPSCLVCPVRAFCAAAAKGDAERFPLRAA
KAARPTRRGEAFVIVRDGCILLRRRADKGLLGGMMEVPTSDWVADGAVAARSTRGRPKVG
ADAAAIASPRADTSPAGAAWLPGRTVQHTFTHFHLELRVFAADADTAPSAAAAFSGEWAA
LDNLAAFALPSVMKKAVASGLETLGFGRAP
NT seq
1173 nt
NT seq
+upstream
nt +downstream
nt
gtgccgctgtttggtgtgcgcctgatgcagaagaggcacagcgcgcggcccgcattcgcc
gccgagagctttcagcgggcgctgcttcgctggtacgacgtcgcgcggcgggatctgccg
tggcgcgcgaagccgggcgaactcgccgatccttaccgcgtgtggctgtcggagatcatg
cttcagcagacgaccgtgaaggcggtcatcccctatttcgaggcgttcacgcggcgctgg
ccgaccgttgacgcgctggccgatgcgtcacgcgacgaggtgctcgcggcgtgggcgggg
ctcggctactactcccgggcgcggaacctgcacgcctgcgcgcaagcgctggcccagggc
ggctttccggcggatgaggtgggccttcgcgctctgccgggcgtcggtgcatatacgtcg
gcggcgattgcggccatcgccttcgatctgcccgccgcagttgttgacggcaatgtggaa
cgcgtgctcgcgcgggttttcgcgctcgagacgccgcttcccgccgcgaagggcgagctt
cgcaaactagccgccgagttgacgcccgcgtcgcgtcccggcgattacgcgcaagccatg
atggatctcggcgcggggatttgcagcccgcgctcgccttcgtgtctggtgtgtccggtg
cgggcgttctgtgccgccgctgcgaagggcgatgcggagcgctttccgctgcgcgcggcg
aaagcggcgaggccgacgcggcgcggcgaagccttcgtgatcgtgcgggacggctgcatc
ctgctgcggcggcgcgcggacaaggggctgctcggcggcatgatggaggtgccgacatcg
gactgggtcgccgatggcgcggttgctgcgcgctcgacgcgcgggcggccgaaggtcggt
gcggacgcggcggctattgcatcaccgcgagccgacacatcgcctgcgggggcagcatgg
ctaccggggcgcaccgttcagcacactttcacgcatttccatttggagcttcgcgtgttc
gcagccgacgcggacaccgccccttcagccgctgcggcattttccggcgaatgggccgcg
ctcgacaacctcgccgcctttgcgcttccctccgtcatgaagaaggctgtcgcgtccggc
ctcgaaactcttggtttcggccgagcgccttag
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