Rahnella victoriana: J9880_10805
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Entry
J9880_10805 CDS
T07871
Symbol
garD
Name
(GenBank) galactarate dehydratase
KO
K01708
galactarate dehydratase [EC:
4.2.1.42
]
Organism
rvc
Rahnella victoriana
Pathway
rvc00053
Ascorbate and aldarate metabolism
rvc01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rvc00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00053 Ascorbate and aldarate metabolism
J9880_10805 (garD)
Enzymes [BR:
rvc01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.42 galactarate dehydratase
J9880_10805 (garD)
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Gene cluster
GFIT
Motif
Pfam:
GD_AH_C
GD_AH_second
SAF
Motif
Other DBs
NCBI-ProteinID:
UHM88851
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Position
complement(2334372..2335943)
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AA seq
523 aa
AA seq
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MSRNKDKEHATEALFIKVHESDNVAIIVNDNGLKAGTRFANGLELIEHIPQGHKVALDPI
AKGGDIIRYGEVIGYAVRDIAQGGWIDESLVELPVAPELNSLPLATRVPPELPPLEGYTF
EGYRNADGSVGTKNLLGITTSVHCVAGVVDYVVKIIERDLLPKFPNVDGVVALNHLYGCG
VAINAPAAIVPIRTIHNLALNPNFGGEVMVVGLGCEKLQPERLLEGTPDVQAISLDDTHI
VRLQDEQHVGFQSMVDDILTVAQFHLERLNRRQRETCPASDLVVGTQCGGSDAFSGVTAN
PAVGYASDLLVRCGATVMFSEVTEVRDAIHLLTPRAADVEVGKRLLEEMAWYDDYLSMGQ
TDRSANPSPGNKKGGLANVVEKALGSIAKSGTSAISEVLSPGQRPTKKGLIYAATPASDF
VCGTQQLASGITVQVFTTGRGTPYGLLAVPVIKMATRTTLANRWHDLMDINAGTIATGDA
TIEDVGWELFHFILDIASGRKKTWSDTWGIHNALAVFNPAPVT
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
atgtcacgtaataaagataaagaacacgccaccgaagctctttttattaaagtgcatgaa
agcgataacgtggccattattgtgaatgacaacggcttaaaagccggcacccgatttgcc
aatggtctggaattaattgagcatattccgcaaggccataaagtcgctttagatccaatt
gccaaaggcggcgatattattcgttatggtgaagtgattggttatgccgtaagggatatc
gcgcagggcggctggattgacgaatcgctggtggaattaccggttgcgcctgagctgaac
agcctgccgctggcgacccgcgtaccgccagaattacccccgctggaaggttataccttc
gaaggttaccgcaatgccgacggcagcgtcggcactaaaaatctgctggggatcaccacc
agcgtgcactgtgtggcgggcgtggtggattacgtggtgaaaatcattgaacgtgattta
ctgcccaaattccccaatgtcgatggcgtcgtggcgctgaatcacctgtacggctgcggt
gtggcgattaacgccccggcggcgatcgtgccgatccgcaccatccacaatctggcgctg
aacccgaactttggcggcgaggtgatggtggtcggcctgggttgtgagaaattacaaccg
gagcgcctgctggaaggcacgccggatgtgcaggcgatttcgctcgatgacacgcacatt
gtgcgtttgcaggatgagcagcatgtcggcttccagtcgatggtggacgatatcctgacc
gtcgcacaattccatcttgagcgcctgaaccgtcgccagcgcgaaacctgcccggcttcc
gatctggtggtcggtacgcagtgtggcggcagcgatgccttctccggcgtcacggccaat
ccggcagtcggttacgcctctgatttgctggtgcgctgcggtgccaccgtgatgttctct
gaagtgacggaagtccgcgatgccatccatctgctgaccccgcgcgccgcggatgtcgaa
gtgggcaaacgtctgctggaagaaatggcctggtacgatgattatctgtcgatgggacaa
accgaccgcagcgccaatccgtcgccgggcaacaaaaaaggcggtctggctaacgtggtt
gaaaaggcactgggttcgattgccaaatccggcaccagcgcgatttccgaagtgttgtct
ccgggccagcgcccgacgaaaaaagggctgatttacgccgccacgcctgccagcgatttt
gtctgcggaacccagcaactggcttccgggatcaccgtacaggtattcaccaccggtcgc
ggcacgccgtacggcctgctggcagtaccggtgattaaaatggcgacccgcaccacgctg
gcaaaccgctggcacgatctgatggacatcaacgccgggacgattgcaaccggggatgcg
accatcgaggatgtgggctgggagttgttccacttcattctggacatcgccagcggccgc
aagaaaacctggtcagacacatggggcatccacaatgcgctggcggtgtttaacccggca
ccggtgacctga
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