KEGG   Rahnella victoriana: J9880_21585
Entry
J9880_21585       CDS       T07871                                 
Symbol
tssC
Name
(GenBank) type VI secretion system contractile sheath large subunit
  KO
K11900  type VI secretion system protein ImpC
Organism
rvc  Rahnella victoriana
Brite
KEGG Orthology (KO) [BR:rvc00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:rvc02044]
    J9880_21585 (tssC)
Secretion system [BR:rvc02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   J9880_21585 (tssC)
SSDB
Motif
Pfam: VipB VipB_2
Other DBs
NCBI-ProteinID: UHM93281
LinkDB
Position
unnamed1:21161..22642
AA seq 493 aa
MSDIQVMNASAQAEQSGDYLDQIIDNTQAIRRESDRTKVKSQLDNFLSEVASGAVIVSND
LVGSIEARIAAIDELLSAQVSKIIQAPEFQRMESSWRGLHKLVQSSVTENTKVRVFNCTK
KELMRDFKSASDFDQSSLFKSIYESEYGTFGGDPYSAFVGDFEFDCMPEDVQLLEHISHV
AAAAHAPFLSAANPGMFAMGSFSEMPRPRDLGKLFETSDYARWKSFRQSDDSRYVGLTLP
RVIGRLPYGAKTVSVEAFNFEEKIDENNDGASYLWVNAAYDLAGRMVEAFEEHGWCAAIR
GVEGGGLVKSLPTYNYISQTGEKVMQCPTEVAISDRREKELAELGFIPLIYCKGTDYAAF
FAVQSTNKPRKYDSELANANAKLSSQLQYIMTTSRFAHYLKSIVRDKVGSFMSKSECQNF
LQNWINQYVVGSDNVGPTIKASHPLREAVVEVVDVPGSPGSYRAVAYLKPHFQLEGLSMS
LRLVAELPASTGA
NT seq 1482 nt   +upstreamnt  +downstreamnt
atgagcgatatccaggtgatgaacgcctctgcccaggcggagcaatccggcgattatctt
gatcagattatcgacaatacccaggccatccgccgcgaatccgaccggaccaaagtgaaa
agtcagctggataacttcctgtcggaagtggcatccggcgcggtcatcgtgtccaatgat
ctggtcggcagcatcgaagcccgcattgcggccattgatgaactgctctctgctcaggtc
agcaaaattattcaggctccggaattccagcgtatggaatcttcctggcgcggtctgcac
aaactggtgcaaagcagcgtcacagaaaacaccaaagtgcgcgtgtttaactgcaccaag
aaagagctgatgcgtgactttaaatcagcctccgactttgatcagtcttccttatttaaa
agtatttatgaaagtgaatatggcaccttcggcggtgacccgtattcggcttttgtcggc
gattttgaattcgactgcatgccggaagatgttcagttgctcgagcacatttcccatgtt
gccgccgcagcccacgcgccattcctgagtgctgcgaatcctggcatgtttgctatggga
tccttctccgaaatgccgcgtccgcgcgatctgggcaagctgtttgaaacctccgactat
gcccgctggaaatccttccgccagagcgatgactcacgctatgtcggtttgacgctgcca
cgcgtcattggccgtctgccttacggtgcgaaaaccgtgtccgtggaggcgttcaatttc
gaagagaaaattgacgaaaataacgacggtgccagctacctgtgggtcaacgcggcttac
gatttagcgggccgtatggtggaagcttttgaagagcacggctggtgcgcggcaatccgc
ggcgtggaaggcggtggtctggtgaaatccctgccaacctacaactacatttcacagacc
ggcgaaaaggtcatgcagtgtccgacagaagtggcgatctctgaccgtcgcgaaaaggaa
ctggctgaacttggttttattccgcttatttattgcaagggcaccgattatgccgcgttc
ttcgccgtgcaatcgaccaataaaccgcgcaaatatgattctgaactggccaatgcaaac
gctaaattgtccagccagttgcaatatattatgacgacgtcgcgctttgctcattattta
aaatccatcgtgcgcgataaagtgggcagctttatgtccaaatctgaatgccagaatttc
ctgcaaaactggatcaaccaatatgttgtaggttcagataatgtaggaccaacgattaaa
gcaagccatccgttgcgtgaggctgtggttgaagttgttgatgtaccaggttctccgggc
agttatcgcgccgttgcatatttaaaaccgcatttccagcttgaagggctaagcatgtcg
ctgcgcctggtagcggaacttcctgcatcgacgggtgcataa

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