Sphingomonas aerolata: NEF64_03895
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Entry
NEF64_03895 CDS
T08450
Name
(GenBank) Ku protein
KO
K10979
DNA end-binding protein Ku
Organism
saer
Sphingomonas aerolata
Pathway
saer03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
saer00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
NEF64_03895
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
saer03400
]
NEF64_03895
DNA repair and recombination proteins [BR:
saer03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
NEF64_03895
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku
Ustilago_mating
Motif
Other DBs
NCBI-ProteinID:
USR01007
LinkDB
All DBs
Position
complement(814499..815386)
Genome browser
AA seq
295 aa
AA seq
DB search
MAARAYWQGQIRLALVSIPVEIYSATKSGAAVSFKQIHEPSGQPIHYDKVVTGVGPVDAD
EIMKGYEVEKGEYVLLNQDEIDAVKLESKKTLELTQFVDASEIDVLYYQKPYFVVPADDL
AEEAFIVLREALRRTKKVGLGQLAMRGREYVVSLKPCGRGLVLETLRYADEVHKAQGYFR
DIPDDKPSEELLELAEALIEKRSGDFHPQDFHDRYVDALKDLIERKREANGKTIIDDKDS
GESKGSNVVDLMAALKKSMEKSGGTATAAKKAPAKKAPAKTATKTATKTPAKKRA
NT seq
888 nt
NT seq
+upstream
nt +downstream
nt
gtggcagcgcgcgcctattggcagggacagatccggctcgcgctggtctcgatcccggtc
gagatctactccgccaccaaatcgggtgcggccgtctcgttcaagcagatccacgaaccc
tcgggccagccgatccattacgacaaggtcgtcaccggcgtcggcccggtcgacgccgac
gagatcatgaagggctatgaggtcgaaaagggcgaatatgtcctgctgaaccaggacgag
atcgacgcggtgaagctcgaatcgaagaagacgctcgaactcacccagttcgtcgatgcg
agcgagatcgacgtgctctattaccagaagccctatttcgtcgtccctgcggacgatctg
gcggaggaggcgttcatcgtcctgcgtgaggcgctgcgccgtacgaaaaaggtcgggctc
ggccagctggcgatgcgcggccgcgaatatgtcgtcagcctcaagccgtgcgggcgcggc
ttggtgctcgagacgctgcgctacgcggacgaggtgcacaaggcgcagggctatttccgc
gatatccccgacgacaagccgtccgaggagctcctcgaactcgccgaggcgctgatcgag
aagcgcagcggcgacttccacccgcaggacttccacgatcggtatgtcgacgcgctgaag
gacctgatcgaacgcaagcgcgaggcgaacggcaagacgatcatagacgacaaggacagc
ggcgagagcaaggggtctaacgtcgtcgacctgatggcggcgctgaagaaatcgatggag
aaatcgggcggcacggccacggctgcgaagaaggcacccgccaagaaagccccggccaag
accgcgaccaagactgcgaccaagaccccggccaagaaacgtgcgtaa
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