Sphingomonas aerolata: NEF64_13560
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Entry
NEF64_13560 CDS
T08450
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
saer
Sphingomonas aerolata
Brite
KEGG Orthology (KO) [BR:
saer00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
saer03021
]
NEF64_13560 (rpoH)
Transcription machinery [BR:
saer03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
NEF64_13560 (rpoH)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
HTH_11
ARA70
Motif
Other DBs
NCBI-ProteinID:
USQ99445
LinkDB
All DBs
Position
2999782..3000684
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AA seq
300 aa
AA seq
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MAARSNVPATIPALGSEAGLNRYLAEIKKFPILQPEQEYMLAKRFQEHGDTDAAAQLVTS
HLRLVAKIAMGYRGYGLPTSELISEGNIGLMQGVKKFEPERGFRLATYAMWWIRASIQEY
ILRSWSLVKMGTTAAQKKLFFNLRRMKSRLDAFEDGDLRPEHVTKIATDLGVAETDVVSM
NRRMAMGGDTSLNVPMREDGEGQWQDWLQDDAPLQDKIVADAQEADVRHSMLVSAMDDLN
DREQHILTERRLTDDPKTLEELSQVYGVSRERVRQIEVRAFEKLQKAMMRIAGEKRLLAA
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
atggcagcccgctccaacgttccagcgacgatacctgcgctcggcagcgaggcgggtctc
aatcgctatctcgccgagatcaagaaattccccatcctgcaacccgagcaggagtatatg
ctcgccaagcggttccaggagcatggcgacaccgatgctgcggcgcagctggtgacgtcg
catctccgtctcgtggcgaagatcgccatgggctatcgtggctacggtctgcctacgtcc
gagctgatctctgagggcaatatcggcctgatgcagggcgtgaagaaattcgagccggag
cgcggcttccgtctcgcgacctatgcgatgtggtggatccgcgcgtcgattcaggaatat
atcctgcgcagctggtcgctcgtgaagatgggcaccaccgcagcgcagaaaaagctgttc
ttcaatctgcgccggatgaagagccgcctcgatgcattcgaggacggtgatctgcgccct
gagcacgtgacgaagatcgccaccgatctcggtgtcgccgagaccgacgtcgtcagcatg
aaccgccgcatggcgatgggtggtgacacctcgctcaacgtcccgatgcgcgaggacggc
gaaggccagtggcaggattggctgcaggacgacgcaccgctccaggacaagatcgttgcc
gacgcacaggaggccgacgtccgccactcgatgctggtttccgcgatggacgacctcaac
gatcgtgaacagcatatcttgaccgaacgccgcctgacggacgatcccaagacgctcgag
gaattgtcgcaagtctatggcgtctcgcgcgagcgagtccgccagattgaagttcgcgcg
ttcgagaagctgcaaaaggctatgatgcgcatcgctggcgaaaagcgcctgcttgccgcc
tga
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