Shewanella aestuarii: HBH39_02875
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Entry
HBH39_02875 CDS
T06921
Symbol
lysS
Name
(GenBank) lysine--tRNA ligase
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
saes
Shewanella aestuarii
Pathway
saes00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
saes00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
HBH39_02875 (lysS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
saes01007
]
HBH39_02875 (lysS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
saes03016
]
HBH39_02875 (lysS)
Enzymes [BR:
saes01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
HBH39_02875 (lysS)
Amino acid related enzymes [BR:
saes01007
]
Aminoacyl-tRNA synthetase
Class II (A)
HBH39_02875 (lysS)
Transfer RNA biogenesis [BR:
saes03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
HBH39_02875 (lysS)
Prokaryotic type
Other AARSs
HBH39_02875 (lysS)
BRITE hierarchy
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Ortholog
Paralog
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GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
Motif
Other DBs
NCBI-ProteinID:
QIR13582
UniProt:
A0A6G9QGI3
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All DBs
Position
PN3F2:612803..614305
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AA seq
500 aa
AA seq
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MTEQTQDENKLIAERRAKLDHIRSNCPANGHPNNFDRKHKAADIQAEYGNYSKEELEGMN
IQRSIAGRIMAKRGPFLVIQDVSGRIQAYAGKDVQKDLKENLHGLDIGDIIGVSGQLHLS
GKGDLYVNMDQYQLLTKALRPLPEKFHGLSDQETRYRQRYVDLIVNEDSRKAFVMRSKVV
AAIRNFMIKKEFMEVETPMMHSIPGGASARPFETHHNALDMAMYLRIAPELYLKRLVVGG
FERVFEINRNFRNEGLSPRHNPEFTMMEFYMAYADFNDLMDLTEEMLSSIATELCGSPLL
PYGEHTVDFGGPYARLTMLDAIKKYNPDNQTIQSMTYEEVKDVEFMRNLAKSLGMTIEKF
WTCGQLLEEIFGETAEPKLMQPTFITGYPADISPLARRNDENHFITDRFEFFIGGREVAN
GFSELNDAEDQDNRFKAQVDAKDAGDDEAMFYDADYIRALEYGLPPTAGQGIGIDRLVML
FTNTHTIRDVILFPAMRPQA
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
atgactgaacaaacccaagacgaaaacaagttaattgcagagcgtcgtgcgaaattagac
cacattcgtagcaactgcccagccaatggtcacccaaataacttcgatcgcaaacacaag
gccgctgatattcaagctgaatacggcaactactctaaagaagagttagaaggcatgaac
attcagcgttcgattgccggccgtattatggctaagcgtggcccattcttggtgatccaa
gatgtatctggtcgtattcaagcttatgctggtaaagatgttcaaaaagatttaaaagaa
aatctgcacggattagacattggtgacatcattggtgttagcggtcagcttcacctttca
ggtaaaggcgacttatatgtcaacatggaccagtaccaattgctaaccaaagcattgcgt
cctctgcctgaaaaattccatggtctatcagatcaagaaactcgttaccgtcagcgttac
gttgatttaattgttaacgaagactcacgcaaagcatttgttatgcgttctaaagtggtt
gcagctattcgtaactttatgattaaaaaagagtttatggaagttgaaaccccaatgatg
catagcattcctggtggtgcgtcagcacgtccttttgaaactcatcacaatgcgcttgat
atggcgatgtacttacgaattgcgccagagctttaccttaagcgtttagtggtgggtggt
tttgagcgtgtgtttgaaatcaaccgtaacttccgtaatgaaggcttatcacctcgtcat
aacccagaattcactatgatggaattctatatggcttatgcagattttaatgatctgatg
gatctaactgaagaaatgttaagctcgattgctactgagctttgtggttctccactactt
ccatatggtgaacatacggttgattttggtggcccatacgctcgtttaaccatgttagat
gcaatcaaaaagtacaatccagacaaccaaacaattcagtcgatgacttatgaagaagtg
aaagacgttgagtttatgcgtaatttggctaaaagccttggcatgacaattgagaagttc
tggacttgtggtcaactacttgaagaaatctttggtgaaactgctgaacctaagttaatg
cagcctacgttcattactggttatccagctgacatttcaccacttgcacgtcgtaacgat
gaaaaccatttcatcactgatcgttttgaatttttcattggcggacgtgaagtggctaat
ggtttctcagagcttaacgatgctgaagatcaagataatcgctttaaggcacaagttgat
gccaaagatgccggtgatgatgaagcgatgttctatgatgccgattacattcgcgcacta
gagtatggtttaccaccaacagccggtcagggtattggtattgatcgtttagtgatgtta
ttcactaatactcacactattcgtgacgtgattttattcccagcgatgcgccctcaagcg
taa
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