Streptococcus agalactiae CNCTC 10/84: W903_0869
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Entry
W903_0869 CDS
T03518
Name
(GenBank) helicase domain protein
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
sagn
Streptococcus agalactiae CNCTC 10/84
Pathway
sagn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sagn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
W903_0869
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sagn03019
]
W903_0869
03009 Ribosome biogenesis [BR:
sagn03009
]
W903_0869
Enzymes [BR:
sagn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
W903_0869
Messenger RNA biogenesis [BR:
sagn03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
W903_0869
Ribosome biogenesis [BR:
sagn03009
]
Prokaryotic type
rRNA helicases
W903_0869
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Helicase_RecD
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AIX04557
LinkDB
All DBs
Position
779119..780705
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AA seq
528 aa
AA seq
DB search
MKFTELNLSQDILSAVEKAGFVEPSPIQEMTIPLALEGKDVIGQAQTGTGKTAAFGLPTL
NKIHTEDNTIQALIIAPTRELAVQSQEELFRFGRDKGVKVRSVYGGSSIEKQIKALRSGA
HVVVGTPGRLLDLIKRKALKLNHIETLILDEADEMLNMGFLEDIEAIISRVPEARQTLLF
SATMPDPIKHIGVKFMKDPEHVKIKATELTNVNVDQYYVRVKENEKFDTMTRLMDVDQPE
LSIVFGRTKRRVDELTRGLKLRGFRAEGIHGDLDQNKRLRVIRDFKNDHIDILVATDVAA
RGLDISGVTHVYNYDIPQDPESYVHRIGRTGRAGKSGQSITFVSPNEMGYLTIIENLTKK
RMTGMKPATASEAFQAKKKVALKRIARDFEDQELVSKFDKFKADALELATQYTPEELALY
VLSLTVQDPESLPEVEITREKPLPFKPSGGGFKGKGGRGNGRGGDRRRNDHGDRRGNRDR
DDRGGRRDFKRRDDKFKKDNRRQENKKPHKNTSSEKQTGFVIRNKGDK
NT seq
1587 nt
NT seq
+upstream
nt +downstream
nt
ttgaaatttacagaacttaacttatcgcaagatattctttcagcggtagaaaaagcaggc
tttgtagagccatcaccaatccaagaaatgactatcccacttgctcttgaaggcaaagat
gtcattggtcaagcgcagacaggtacaggaaaaactgcagcttttgggttaccaacttta
aataaaattcatactgaagataatactatccaagcacttattattgctcctacacgtgaa
cttgcagtacaatcacaagaagaattgttccgttttggacgcgataaaggtgttaaggtc
cgctctgtttatggtgggtcaagtattgaaaaacaaatcaaggcattacgttcaggagca
cacgttgttgttggaactccaggtcgattacttgatttaattaaacgtaaagcacttaaa
cttaatcacattgaaactcttattcttgatgaagcagacgaaatgcttaacatgggattt
ttagaggacattgaagcaatcattagtcgtgtaccagaagcacgtcaaactcttttattc
tcagcgacaatgcctgatccaatcaaacatatcggggttaaattcatgaaagatcctgag
catgttaaaattaaagcaactgaattaactaatgtgaatgttgatcagtattatgttcgc
gttaaggaaaatgaaaaattcgatactatgacacgtttgatggacgttgatcaaccagaa
ttgtcaattgtctttggacgtacgaaacgtcgtgtagatgaattaactcgtggtctaaaa
ttacgtggtttccgagcagaaggaattcatggagacttagatcaaaataaacgtcttcgt
gttatcagagactttaaaaatgaccatattgatattcttgttgccacagatgttgctgcg
cgtggtttagatatttcaggcgttacacatgtttacaactatgatattccccaagatcca
gaaagttatgttcaccgtattggacgtactggtcgtgctggtaaatctggtcaatctatc
acttttgtttcaccaaacgaaatgggatatttgacaattattgaaaacttaactaaaaaa
cgtatgactggaatgaagcctgctactgcaagcgaagcatttcaggctaagaaaaaagtt
gcattgaaacgtattgcacgtgactttgaggatcaagaattagtttctaaatttgataaa
tttaaagccgatgctttagaattagcaactcaatacacaccagaagaacttgctctttat
gtcttaagcttaacagttcaggatccagaatcgttaccagaagttgaaatcacacgtgaa
aaaccattaccatttaaaccatcaggtggtggctttaaaggtaaaggtggacgaggtaat
ggccgtggtggcgatcgtcgacgcaatgatcatggtgatcgtcgtggaaatcgtgaccgt
gatgatcgtggtggtcgtcgtgattttaaacgtcgtgatgataagttcaagaaagataat
cgtcgtcaagaaaataaaaaacctcataaaaacacttcaagtgaaaaacaaactggattt
gttattcgcaacaaaggcgataaataa
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