Streptococcus agalactiae COH1: GBSCOH1_0049
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Entry
GBSCOH1_0049 CDS
T03434
Name
(GenBank) Holliday junction DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
sagt
Streptococcus agalactiae COH1
Pathway
sagt03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sagt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
GBSCOH1_0049
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sagt03400
]
GBSCOH1_0049
Enzymes [BR:
sagt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
GBSCOH1_0049
DNA repair and recombination proteins [BR:
sagt03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
GBSCOH1_0049
RecFOR pathway proteins
GBSCOH1_0049
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
TIP49
AAA_14
Mg_chelatase
Sigma54_activat
Rad17
AAA_3
nSTAND3
AAA_18
AAA_16
DUF815
RNA_helicase
NTPase_1
ResIII
MCM
bpMoxR
NB-ARC
TsaE
IstB_IS21
AAA_17
Sigma54_activ_2
AAA_24
AAA_25
Motif
Other DBs
NCBI-ProteinID:
CDN65515
LinkDB
All DBs
Position
65878..66876
Genome browser
AA seq
332 aa
AA seq
DB search
MTRFLDSDAMGDEELVERTLRPQYLREYIGQDKVKDQLKIFIEAAKLRDESLDHVLLFGP
PGLGKTTMAFVIANELGVNLKQTSGPAIEKSGDLVAILNDLEPGDVLFIDEIHRMPMAVE
EVLYSAMEDFYIDIMIGAGETSRSVHLDLPPFTLIGATTRAGMLSNPLRARFGITGHMEY
YEENDLTEIIERTADIFEMKITYEAASELARRSRGTPRIANRLLKRVRDYAQIMGDGLID
DNITDKALTMLDVDHEGLDYVDQKILRTMIEMYNGGPVGLGTLSVNITEERDTVEDMYEP
YLIQKGFIMRTRTGRVATDKAYEHLGYQRFDK
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atgacaagatttttagatagtgatgcaatgggtgacgaagaattggtagaacgtacactt
cgtccgcagtatttaagagagtatattggacaagataaggttaaagatcagctaaaaata
tttattgaagctgctaaattgcgtgatgagtcattggatcatgtgttattatttggccct
cctggtttagggaaaacaaccatggcatttgtaattgctaatgagttgggtgtcaatctc
aaacaaacatcaggtcccgcaattgaaaaatcaggggatttagtagccattttaaatgat
ttagaaccaggtgatgttctttttattgatgaaattcatcgtatgccgatggcggttgaa
gaggtactttatagtgcaatggaagacttctatattgacattatgatcggtgcaggagaa
actagtagaagtgttcatttagatttgccgccctttaccttaattggtgcaacgacacgt
gcaggtatgttatctaatcccttacgtgctcgctttggtattacagggcatatggagtat
tatgaagaaaacgatttgacagaaattattgagcgtacagcagatatttttgaaatgaaa
attacttatgaagctgcttctgaattagcgcgtcgcagtcgtggaacgccacgtatcgct
aaccgtttattgaaacgtgttcgagattatgctcaaatcatgggagatggtttgatagat
gacaatattacagataaagcattaacgatgttagatgttgatcacgaggggcttgattac
gtcgatcaaaaaatcttaagaaccatgattgaaatgtataatggaggtcctgttggttta
ggaactctatccgttaatattactgaagaacgagatactgttgaagacatgtacgaacct
tatttaattcaaaaaggttttattatgcgtacccgtaccggtcgtgtagctacggataag
gcatacgaacatttaggttatcagcgatttgataaataa
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