Sphingopyxis alaskensis: Sala_0708
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Entry
Sala_0708 CDS
T00361
Name
(GenBank) DNA polymerase III, beta subunit
KO
K02338
DNA polymerase III subunit beta [EC:
2.7.7.7
]
Organism
sal
Sphingopyxis alaskensis
Pathway
sal03030
DNA replication
sal03430
Mismatch repair
sal03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sal00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Sala_0708
03430 Mismatch repair
Sala_0708
03440 Homologous recombination
Sala_0708
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sal03032
]
Sala_0708
03400 DNA repair and recombination proteins [BR:
sal03400
]
Sala_0708
Enzymes [BR:
sal01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Sala_0708
DNA replication proteins [BR:
sal03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Sala_0708
DNA repair and recombination proteins [BR:
sal03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Sala_0708
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_beta
DNA_pol3_beta_2
DNA_pol3_beta_3
Motif
Other DBs
NCBI-ProteinID:
ABF52429
UniProt:
Q1GV93
LinkDB
All DBs
Position
712708..713823
Genome browser
AA seq
371 aa
AA seq
DB search
MKATIERAVLLKSLGHVQSVVERRNTIPILSNVLIEADGTGQLRLMATDLDLQVVETIAA
KVETPGTTTVSAHTLFEIARKLPEGSEVSLAAAEGKVQVKAGRSNFNLPTLPRDDFPVIA
EGDLPTNFELPVAELIQIIDKTRFAISTEETRYYLNGIFLHVAEDATGPVLKAAATDGHR
LARYTVTRPDGAAGMPDVIVPRKCVGEIRKLLDEAEGNVEISLSASKIRFQLGNAVLTSK
LIDGTFPDYSRVIPTANDKLLKVDPKSLFQGVDRVSTIASEKTRAVKVGLDKDRITLSVT
SPENGTAAEELAAAYDSDAMEIGFNARYLSDILGQVDGDSVELHLADANAPTLIRESEKS
PALYVLMPMRV
NT seq
1116 nt
NT seq
+upstream
nt +downstream
nt
atgaaagcgacgatcgaacgcgcagtcttgttgaaaagcctcggccacgttcaatcggtg
gtcgaacggcgcaatacgatcccgatcctgtcgaacgtcctcatcgaagccgacggcacg
ggccaactcaggctgatggcgaccgaccttgatctgcaggtggtcgaaacgattgccgcc
aaggtcgaaacgccgggtacgaccaccgtatcggcgcacaccctgttcgagatcgcgcgc
aagctgcccgaaggatcggaagtcagcctcgccgccgccgagggcaaggtgcaggtcaag
gccggccgctcgaacttcaacctgccgaccttgccgcgcgacgatttcccggtgatcgcc
gagggcgacctgccgaccaatttcgaactgcccgtcgccgagctcatccagatcatcgac
aagacgcgcttcgccatctcgaccgaggaaacgcgctattatctgaacggcatcttcctg
cacgttgccgaggatgcgacggggccggtgctgaaggcggcggcgaccgacggccaccgc
ctcgcgcgctacacggtgacgcgccccgacggtgcggccgggatgcccgacgtgatcgtt
ccgcgcaaatgcgttggcgaaatccgcaagctgctcgacgaggcggagggtaatgtcgaa
atcagcctgtcggcgagcaagatccgcttccagctcggcaacgcggtcctgacgtcgaag
ctgatcgacggcaccttccccgactacagccgcgtcattccgaccgcgaatgacaagctg
ctgaaagtcgatccgaaaagcctgttccagggcgtcgaccgcgtgtcgacgatcgccagc
gaaaagacgcgcgcggtcaaggtcgggctcgacaaggaccggatcacgctcagcgtcacc
agccccgaaaacggcaccgccgccgaagaactcgccgccgcctacgacagcgacgcgatg
gagatcggcttcaacgcccgctacctcagcgacattttgggacaggtcgatggcgacagc
gtcgaacttcacctcgccgacgccaacgcccctacgctgatccgcgagagcgaaaaaagc
ccggcgctttacgtgctgatgccgatgcgggtctga
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