Salinibacterium sp. UTAS2018: ESZ53_07335
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Entry
ESZ53_07335 CDS
T05816
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
sala
Salinibacterium sp. UTAS2018
Pathway
sala03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
sala00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
ESZ53_07335
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sala03021
]
ESZ53_07335
03400 DNA repair and recombination proteins [BR:
sala03400
]
ESZ53_07335
Enzymes [BR:
sala01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
ESZ53_07335
Transcription machinery [BR:
sala03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
ESZ53_07335
DNA repair and recombination proteins [BR:
sala03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
ESZ53_07335
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
SCNM1_acidic
Motif
Other DBs
NCBI-ProteinID:
QAV70270
UniProt:
A0A410YIU5
LinkDB
All DBs
Position
complement(1526179..1530060)
Genome browser
AA seq
1293 aa
AA seq
DB search
MLDVHAFDEIKIGLATADDIRRWSHGEVKKPETINYRTLKPEKDGLFGEQIFGPSRDWEC
SCGKYKRVRFKGIVCERCGVEVTKSAVRRERMGHIELAAPVTHIWYFKGVPSRLGYLLDM
APKDLEKVIYFAAYMIISVDEEGRHADLPALENEIRLEIKTLEGQRDSRIADRLTKFEED
LAALEEEGAKADQKRRVKDAAEKEMSQLRKSIDEQISQLERVWEDFRTLKIGDLKPEDSV
FQELQDRFGSYFEAFMGAEAIKKRLEAFDLALESVELHDQIANGKGQKKIRAIKRLRVVN
SFLQTGNSPAAMVLDVVPVIPPELRPMVQLDGGRFATSDLNDLYRRVINRNNRLRRLLDL
GAPEIIVNNEKRMLQEAVDALFDNGRRGRPVTGTGNRALKSLSDMLKGKQGRFRQNLLGK
RVDYSGRSVIIVGPQLKLHQCGLPKQMALELFKPFVIKRLIDLSHAQNIKSAKRMVERAR
PQVWDVLEEIIRERPVLLNRAPTLHRLGIQAFEPQLVEGKAIQLHPLVCAAFNADFDGDQ
MAVHLPLSVEAQAEARILMLASNNILKPSDGRPVTLPTQDMIIGLHHLTTLTEGAVGEGR
AFSSVAEAIFAFDQHSLDLNAKVRLRLDGVHLAEEDAPEGFVQGQSKLMETTLGRALFNE
ALPKDYPYIEALADKGQISAIVNDLAERYVKVDVASALDAIKDAGFHWATRSGVTVALSD
IVTPPTKPEIIGRYEKIAAKVQGQYEKGLTTDAERRQELIEIWNKATAEVATAMQSNFRT
DNNINRMVSSGARGNWMQVRQIAGMRGLVSNPKGEIIPRPIVHSYKEGLTVAEYFISTHG
ARKGLADTALRTADSGYLTRRLVDVSQDVIIRENDCGTRKGLDMPIAAQDADGKWILDDN
VENSVYARSLAADATNEKGDVVAAAGADVGDVLLEKLVAAGVHSIKVRSVLTCESAVGVC
AVCYGRSLATGLLVDIGEAVGIIAAQSIGEPGTQLTMRTFHTGGVASADDITQGLPRVTE
LFEARTPKGASPIAEAAGRVTIEDTDRSRKLILTPDNGDEPIAYPVLRRATLLIEDGEHV
ELGTQLHVGNVDPKEVLRVRGVRAVQQHLVDGVQGVYRSQGVPIHDKHIEVIVRQMLRKV
TVVDHGDTGLLPGELVDRSKYNELNRGVLTEGKATASARQEILGITKASLATESWLSAAS
FQETTRVLTQAAMEGKSDPLMGLKENVIIGKLIPAGTGLARYRDVSVEATEEAKAERYPN
RIFADDASLTESDLSFVDFDSFSSNDSTPGTYN
NT seq
3882 nt
NT seq
+upstream
nt +downstream
nt
ttgctcgacgttcacgcgtttgatgaaatcaaaatcggtctcgctaccgccgacgacatt
cgtcgctggtcgcacggtgaggtaaaaaagccagagaccattaactaccgcacactcaag
ccggagaaagatggtctgttcggcgaacagatcttcggaccttcgcgcgactgggagtgc
tcctgtggcaagtacaagcgtgtccgctttaagggcatcgtttgtgagcgctgtggtgtt
gaagtaaccaagtcggctgtgcgccgtgagcgcatgggccacatcgagctcgccgctccg
gttacccacatctggtacttcaagggtgttccgagccgtctcggttacctgcttgacatg
gcaccgaaggacctcgaaaaggtcatctacttcgctgcatacatgatcatttcggttgac
gaagaaggccgtcacgctgacctgcctgcgcttgagaacgagatccgtctcgaaatcaag
acgcttgagggccagcgcgattcccgcatcgctgaccgcttgaccaagttcgaggaagac
ctcgccgctcttgaagaagagggtgcgaaggctgaccagaagcgccgcgtcaaggatgct
gctgagaaagaaatgtctcagctgcgcaagtcgatcgatgagcagatctcgcagcttgag
cgcgtgtgggaagacttccgcaccctcaagatcggtgacctgaagcctgaagactccgtc
ttccaggaactgcaggaccgtttcggtagctacttcgaggcgttcatgggtgccgaggca
atcaagaagcgtcttgaagccttcgacctggcgctcgaaagcgttgaactgcacgaccag
atcgctaacggtaagggtcagaagaagatccgcgccatcaagcgcctgcgtgtagtgaac
tcgttcctccagaccggcaactcgccggccgcgatggttctcgacgtcgttccggttatt
cctccggagcttcgcccgatggttcagctggatggtggccgcttcgcgacctccgacctc
aacgacctctaccgtcgtgtgatcaaccgcaacaaccgtctgcgtcgactccttgacctc
ggtgcccccgagatcatcgtcaacaacgagaagcgcatgcttcaggaagccgttgacgca
ctgttcgacaacggtcgtcgtggtcgccccgtaacgggaactggcaaccgtgccctcaag
tccttgagcgacatgctcaagggtaagcagggtcgtttccgccagaacctgctcggaaag
cgcgttgactactccggtcgttcggtgatcatcgttggaccgcagctcaaactgcaccag
tgtggtcttcccaagcagatggctctcgagctgttcaagccgtttgttatcaagcgcctg
atcgacttgagccacgcgcagaacatcaagagcgccaagcgcatggttgagcgtgcacgt
ccgcaggtctgggacgtactcgaagagatcattcgcgagcgccccgtgctgctgaaccgt
gcaccaacactgcaccgtttgggcatccaggcattcgaacctcagctcgttgagggtaag
gctattcagcttcaccccctcgtctgtgctgcgttcaacgctgacttcgatggtgaccag
atggctgttcaccttccgttgtcggttgaagcacaggctgaagctcgcatcctgatgctc
gccagcaacaacatcctcaagccgtctgacggtcgcccggtgaccctgcccacacaggac
atgatcatcggtctgcaccacctgaccacgctcacggagggtgctgtcggcgaaggccgt
gcgttctcgtcggtcgctgaagcgatcttcgcgttcgaccagcactcgctcgacctcaac
gcgaaggtacgtctccgtctcgacggcgtccacctcgctgaggaagacgctcccgaggga
ttcgttcagggacagtccaagctcatggaaacgaccctcggtcgcgctctcttcaacgag
gcgctcccgaaggactacccgtacatcgaggcactcgctgacaagggccagatttcggcc
atcgtcaacgacctcgctgagcggtacgtgaaggtggatgttgcttcggctcttgacgcg
atcaaggacgctggattccactgggcgactcgctccggtgtaaccgttgcgctgtccgac
attgtgaccccgccgaccaagccggaaatcatcggccgctacgagaagatcgcagcgaag
gttcagggccagtacgagaagggactcacgaccgacgccgagcgtcgtcaggagctcatc
gagatctggaacaaggcgaccgcagaagtagcgactgccatgcagtccaacttccgcact
gacaacaacatcaaccgcatggtgtcgtctggtgctcgtggtaactggatgcaggttcgt
cagatcgccggtatgcgtggtctggtatcgaacccgaagggtgagatcatccctcgcccg
atcgttcactcgtacaaggaaggcctgaccgtagccgagtacttcatctcgactcacggt
gctcgtaagggactggccgacaccgcactgcgtactgcagactccggatacctcacgcgt
cgactcgttgacgtgtcgcaggatgtcatcattcgtgaaaacgactgtggcacccgcaag
ggactggacatgcccatcgcagcgcaggacgctgatggcaagtggatcctcgacgacaac
gttgagaactcggtctacgctcgcagccttgctgcggatgccaccaacgagaagggcgat
gtcgtcgccgctgctggtgcagacgtcggagacgttctgctcgagaagctcgttgcagcc
ggtgttcacagcatcaaggttcgttcggtactcacgtgtgagtccgctgttggtgtgtgt
gccgtctgctacggccgctcgctcgcaaccggtcttctcgttgacatcggtgaggctgtc
ggaattatcgccgcacagtcgatcggtgagcccggtacccagctgaccatgcgtaccttc
cacaccggtggtgttgcttcggcagacgacattacgcagggtcttccccgcgttacggaa
ctcttcgaagctcgtacccctaagggtgcaagccccatcgcagaagccgctggtcgcgtc
acgatcgaagacaccgaccgcagccgcaagctgatcctcacgcctgacaatggcgacgag
cccatcgcttacccggtactgcgtcgtgcaaccctcctcattgaggacggcgagcacgtt
gagctcggcacgcagcttcacgtcggaaacgttgacccgaaggaagttcttcgtgtccgc
ggtgtccgtgccgtgcagcagcacctcgttgatggtgtccagggcgtttaccgctcgcag
ggtgtaccgattcacgataagcacattgaggtcatcgttcgtcagatgctccgcaaggtg
actgttgttgaccacggtgacaccgggctcctcccgggtgagctggtcgaccgttcgaag
tacaacgagctcaaccgcggtgttctcaccgagggcaaggcaacggcatccgctcgtcag
gagatcttgggtatcaccaaggcttcgctggcgaccgagtcgtggctgtcggccgcgtcg
ttccaggagaccacccgcgttcttacgcaggcggccatggaaggcaagtctgacccgctc
atgggactcaaggagaacgtcatcatcggtaagctcatcccggctggtacgggattggct
cgctaccgcgatgtgtcggtcgaggcaacggaagaggcgaaagccgaacgttaccccaac
cgcatcttcgctgatgatgcaagcctcaccgagagcgacttgagcttcgtcgacttcgac
agcttcagctcgaacgattccacgccgggaacctacaactaa
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