KEGG   Streptomyces albireticuli: SMD11_1535
Entry
SMD11_1535        CDS       T05230                                 
Symbol
rnd
Name
(GenBank) 3'-5' exonuclease
  KO
K03684  ribonuclease D [EC:3.1.13.5]
Organism
salj  Streptomyces albireticuli
Brite
KEGG Orthology (KO) [BR:salj00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:salj03016]
    SMD11_1535 (rnd)
Enzymes [BR:salj01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.13  Exoribonucleases producing 5'-phosphomonoesters
    3.1.13.5  ribonuclease D
     SMD11_1535 (rnd)
Transfer RNA biogenesis [BR:salj03016]
 Prokaryotic type
  3'processing and CCA adding factors
   3'processing factors
    SMD11_1535 (rnd)
SSDB
Motif
Pfam: DNA_pol_A_exo1 DNA_pol_A_exoN HRDC DUF2184
Other DBs
NCBI-ProteinID: ARZ67196
UniProt: A0A1Z2KYU7
LinkDB
Position
1714291..1715475
AA seq 394 aa
MEPREGIPPVVADNDALARIVAAFAAGTGPVAVDAERASGYRYGQRAYLVQLRREGAGST
LIDPVGCPDLSSLGEAVGDAEWVLHAATQDLPCLREIGMTPSRLFDTELAGRLAGFARVG
LGAMVENVLGYALEKGHSAVDWSTRPLPDPWLRYAALDVELLVDLRDALEEELDRQGKLE
WARQEFAAIAAAPPAPPRKDPWRRTSGMHKVRRRRQMAVVRELWTARDLIAQRRDVSPGK
VLGDAAIVEAALNMPPNAQALAALPGFGHRMSRKQLEQWQAAVDRARAIPDHELPQPGQP
LTGPPPPRAWADKDPAAAARLSAARTAVSALAERLTMPQENLIAPDTVRRLCWEPPKTAT
PEAVAEVLAAHGARAWQIEQVTPPLVKALTEAAA
NT seq 1185 nt   +upstreamnt  +downstreamnt
ttggagccacgcgagggcatcccgcccgtcgtcgctgacaacgatgccctggcccggatc
gtcgcggcgttcgcggccggcacgggccccgtcgcggtggacgcggagcgcgcctccggc
taccgctacggccagcgcgcctatctcgtgcagctgcgccgcgagggcgccggctcgacc
ctgatcgaccccgtcggctgccccgacctgtcctcgctcggcgaggccgtcggcgacgcc
gaatgggtgctgcacgcggccacgcaggacctgccgtgcctgcgggagatagggatgacg
ccgtcgcggctcttcgacacggagctggcgggacggctcgccggattcgcccgggtggga
ctcggcgccatggtcgagaacgtcctggggtacgccctggagaagggccactccgccgtc
gactggtccacccgcccactgcccgacccctggctgcgctacgccgcgctcgacgtggag
ctcctcgtcgacctgcgcgacgcgctggaggaggagctggaccggcaggggaagctggag
tgggcccgccaggagttcgcggcgatcgccgccgccccgcccgccccgccgcgcaaggac
ccctggcgccgtacgtccgggatgcacaaggtccggcggcggcggcagatggccgtggtc
cgcgagctgtggaccgcgcgcgacctcatcgcccagcggcgcgacgtctcgccgggcaag
gtgctcggcgacgccgcgatcgtcgaggccgcgctgaacatgccgccgaacgcgcaggcg
ctggccgcgctgcccggcttcggccaccggatgagccgcaagcagctggagcagtggcag
gcggcggtcgaccgcgcccgcgcgatcccggaccacgagctcccgcagcccggccagccg
ctgaccggcccgccgccgccccgcgcctgggcggacaaggacccggccgcggcggcccgg
ctgtccgcggcccgcacggcggtgtccgcgctggccgagcggctcaccatgccgcaggag
aacctgatcgccccggacaccgtgcgccgcctgtgctgggagcccccgaagacggcgacg
ccggaggcggtggcggaggtcctcgccgcgcacggcgcccgcgcgtggcagatcgaacag
gtgaccccacccctggtgaaggccctgacggaggccgcggcctga

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