Streptomyces albireticuli: SMD11_1535
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Entry
SMD11_1535 CDS
T05230
Symbol
rnd
Name
(GenBank) 3'-5' exonuclease
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
salj
Streptomyces albireticuli
Brite
KEGG Orthology (KO) [BR:
salj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
salj03016
]
SMD11_1535 (rnd)
Enzymes [BR:
salj01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
SMD11_1535 (rnd)
Transfer RNA biogenesis [BR:
salj03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
SMD11_1535 (rnd)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
DNA_pol_A_exoN
HRDC
DUF2184
Motif
Other DBs
NCBI-ProteinID:
ARZ67196
UniProt:
A0A1Z2KYU7
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All DBs
Position
1714291..1715475
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AA seq
394 aa
AA seq
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MEPREGIPPVVADNDALARIVAAFAAGTGPVAVDAERASGYRYGQRAYLVQLRREGAGST
LIDPVGCPDLSSLGEAVGDAEWVLHAATQDLPCLREIGMTPSRLFDTELAGRLAGFARVG
LGAMVENVLGYALEKGHSAVDWSTRPLPDPWLRYAALDVELLVDLRDALEEELDRQGKLE
WARQEFAAIAAAPPAPPRKDPWRRTSGMHKVRRRRQMAVVRELWTARDLIAQRRDVSPGK
VLGDAAIVEAALNMPPNAQALAALPGFGHRMSRKQLEQWQAAVDRARAIPDHELPQPGQP
LTGPPPPRAWADKDPAAAARLSAARTAVSALAERLTMPQENLIAPDTVRRLCWEPPKTAT
PEAVAEVLAAHGARAWQIEQVTPPLVKALTEAAA
NT seq
1185 nt
NT seq
+upstream
nt +downstream
nt
ttggagccacgcgagggcatcccgcccgtcgtcgctgacaacgatgccctggcccggatc
gtcgcggcgttcgcggccggcacgggccccgtcgcggtggacgcggagcgcgcctccggc
taccgctacggccagcgcgcctatctcgtgcagctgcgccgcgagggcgccggctcgacc
ctgatcgaccccgtcggctgccccgacctgtcctcgctcggcgaggccgtcggcgacgcc
gaatgggtgctgcacgcggccacgcaggacctgccgtgcctgcgggagatagggatgacg
ccgtcgcggctcttcgacacggagctggcgggacggctcgccggattcgcccgggtggga
ctcggcgccatggtcgagaacgtcctggggtacgccctggagaagggccactccgccgtc
gactggtccacccgcccactgcccgacccctggctgcgctacgccgcgctcgacgtggag
ctcctcgtcgacctgcgcgacgcgctggaggaggagctggaccggcaggggaagctggag
tgggcccgccaggagttcgcggcgatcgccgccgccccgcccgccccgccgcgcaaggac
ccctggcgccgtacgtccgggatgcacaaggtccggcggcggcggcagatggccgtggtc
cgcgagctgtggaccgcgcgcgacctcatcgcccagcggcgcgacgtctcgccgggcaag
gtgctcggcgacgccgcgatcgtcgaggccgcgctgaacatgccgccgaacgcgcaggcg
ctggccgcgctgcccggcttcggccaccggatgagccgcaagcagctggagcagtggcag
gcggcggtcgaccgcgcccgcgcgatcccggaccacgagctcccgcagcccggccagccg
ctgaccggcccgccgccgccccgcgcctgggcggacaaggacccggccgcggcggcccgg
ctgtccgcggcccgcacggcggtgtccgcgctggccgagcggctcaccatgccgcaggag
aacctgatcgccccggacaccgtgcgccgcctgtgctgggagcccccgaagacggcgacg
ccggaggcggtggcggaggtcctcgccgcgcacggcgcccgcgcgtggcagatcgaacag
gtgaccccacccctggtgaaggccctgacggaggccgcggcctga
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