Silicimonas algicola: EF888_00625
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Entry
EF888_00625 CDS
T05779
Name
(GenBank) exodeoxyribonuclease VII small subunit
KO
K03602
exodeoxyribonuclease VII small subunit [EC:
3.1.11.6
]
Organism
salo
Silicimonas algicola
Pathway
salo03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
salo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
EF888_00625
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
salo03400
]
EF888_00625
Enzymes [BR:
salo01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
EF888_00625
DNA repair and recombination proteins [BR:
salo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
EF888_00625
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_S
Motif
Other DBs
NCBI-ProteinID:
AZQ65765
UniProt:
A0A316G1R5
LinkDB
All DBs
Position
114575..114817
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AA seq
80 aa
AA seq
DB search
MNGTPVAEMSFEEAMKELEAVVGRLESGDVPLEDSIKLYERGAALKDHCQKKLAEAEEKV
ALITTDADGNPKGLQPADIK
NT seq
243 nt
NT seq
+upstream
nt +downstream
nt
atgaacgggacaccggtcgccgagatgagcttcgaggaagcgatgaaggaactcgaggcc
gtggtggggcggcttgagtcgggcgacgtgcctctcgaggattccatcaagctctacgag
cgcggcgctgcgctgaaggatcactgccagaagaagctggcggaggccgaggagaaggtc
gcgctgatcacaaccgatgcggacggcaaccccaaggggcttcagcccgctgatataaag
tga
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