Silicimonas algicola: EF888_16400
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Entry
EF888_16400 CDS
T05779
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
salo
Silicimonas algicola
Brite
KEGG Orthology (KO) [BR:
salo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
salo03009
]
EF888_16400 (rimO)
Enzymes [BR:
salo01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
EF888_16400 (rimO)
Ribosome biogenesis [BR:
salo03009
]
Prokaryotic type
ribosomal protein modification factors
EF888_16400 (rimO)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
TRAM_2
UPF0004
DUF1732
DUF4646
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
AZQ68574
UniProt:
A0A316G7F4
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Position
3348948..3350306
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AA seq
452 aa
AA seq
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MSANPPDLRPDLARARVPEDRRAGQPTIGMVSLGCPKALVDSERILTRLRAEGYAISPDY
GGADAVIVNTCGFLDSAKAESLDAIGEALKENGRVIVTGCLGAEPDYITGAHPKVLAVTG
PHQYEQVLDAVHSAVPPDPDPFIDLLPPQGVKLTPRHYSYLKIAEGCNHACKFCIIPDMR
GRLASRPERAVLREAEKLVGNGVRELLVISQDTSAYGTDWKGRDAKFPILDLARGLGALG
AWVRLHYVYPYPHVRDLVPLMAEGLILPYLDVPFQHAHPDTLRRMARPAAAERTLEEIAA
WRAVCPEIALRSTFIVGYPGETEAEFRVLLDWLDEAQLDRVGCFKYENVAGARSNALPDH
VSEDVKEERWHRFMEKAQAISEAKLAAKVGTRLEVIVDEVDDEAATCRTKADAPEIDGHL
FIDEGFEGLAPGDILTVEVEEAGEYDLWGRRA
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atgtccgcgaacccgccagacctgcgccccgacctagcccgcgcccgcgtccccgaggac
cgccgcgccggccagccgaccatcggcatggtctcgctcggctgtccaaaggcgctggtc
gacagcgaacgcatcctgacccggctccgcgccgagggctatgcgatcagcccggactac
ggcggggcggacgcggtcatcgtgaacacctgcggcttcctcgacagcgccaaggccgaa
agcctcgacgccatcggcgaggcgctgaaggaaaacggccgcgtcatcgtcaccggctgc
cttggggccgagcccgactatatcacaggcgctcacccaaaggttctggcggtgacgggg
cctcaccagtacgagcaggtgctcgacgccgtccacagcgcggtgccgcccgatcccgac
ccgttcatcgacctcctgccgcctcagggcgtgaagctgacgccgcgccattacagctat
ctgaagatcgccgaaggctgcaatcacgcctgcaagttctgcatcatccccgacatgcgg
ggtcgccttgcctcgcgtccggaacgggccgtcctgcgcgaggccgagaagctggtcggg
aacggcgtgagggagcttctggtcatcagccaggacacgtcggcctatggcacggattgg
aaagggcgcgacgccaagtttcccattctcgacctcgcgcgtggcttgggcgccctcgga
gcctgggtgcgcctgcactacgtctacccctacccgcatgtccgggacctcgtgccgctc
atggccgaagggctgattcttccctacctcgacgtgcccttccagcacgcccaccccgac
acgctccgccgcatggcgcgtcccgccgccgccgaacggacgttggaggaaatcgcggcc
tggcgtgccgtctgccccgagatcgcgcttcggtcgaccttcatcgtgggttacccgggc
gagaccgaggccgagttccgggtcctgctcgactggctcgacgaggcgcaactggatcgc
gtcggctgcttcaagtacgagaacgtggccggcgcgcggtcgaatgcgctgcccgaccac
gtctccgaggacgtgaaggaggaacgctggcaccgcttcatggaaaaggcgcaggccatt
tccgaagcgaagctggcggccaaggtcggaacccgtctcgaggtcatcgtggacgaggtt
gacgacgaggccgcgacctgccgcacgaaggcagacgcgcccgagatcgacgggcatctc
ttcatcgatgagggtttcgaaggtctcgctcccggcgacatactgaccgtcgaggtcgag
gaggctggcgagtacgatctttggggtcggcgcgcgtga
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